mRNA_E_fasciculatus_S2_contig8849.16943.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G783_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.270e-67 Identity = 106/109 (97.25%), Postives = 109/109 (100.00%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDSG 327
QLAMYSIVFYLPMALW+EGPLFQGWTV+AGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPD+G
Sbjct: 96 QLAMYSIVFYLPMALWDEGPLFQGWTVSAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTG 204
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE24_9PHAE) HSP 1 Score: 215 bits (548), Expect = 9.080e-67 Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDSG 327
QLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPD+G
Sbjct: 261 QLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTG 369
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUK8_THAPS) HSP 1 Score: 98.2 bits (243), Expect = 2.300e-22 Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWEEGP---LFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAP 318
QLA SI Y+ LW+EG F GW++ G+LS+LG+AGG+LVAL++K+ D++LKT AT+GAI+++A HF LG PL + + V+S+ NY+ D +P AP
Sbjct: 174 QLAFTSIPIYIAFILWDEGGDIGYFGGWSITTGVLSMLGAAGGLLVALSIKHGDSILKTLATTGAIVLSATLDHFLLGGPLTPIMCIAGTQVVISICNYTFDASPPEAP 282
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZA06_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.510e-20 Identity = 50/109 (45.87%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWEEGPL---FQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAP 318
QLA SI Y+ WE+G + F GW+V AGIL++LG+AGG+LVAL++K+ D++LKT AT+GAI+++A H+ LG PL + + V+S+ NY+ D +P AP
Sbjct: 246 QLAFGSIPIYVMFMFWEDGGIAGYFGGWSVVAGILALLGAAGGMLVALSIKHGDSILKTLATTGAIVLSAALDHYLLGGPLTNIMCIAGVIVVISICNYTFDMSPPEAP 354
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S1P2_9SPIT) HSP 1 Score: 91.3 bits (225), Expect = 1.810e-20 Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWEEGPL-FQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAP 306
QLA +SI+ Y P+ L++ FQGWT AG+ + +G GG+LVAL++KY D+++KT AT+GAI+ T + L P +PI GA ++S+ NY+D G P
Sbjct: 106 QLAFWSIIIYTPIMLYDNPRRPFQGWTAMAGVCAFVGGVGGVLVALSIKYADSIMKTIATTGAIVFTTILNAAFLDGPFTLPIMAGAVIVMVSVCNYNDKGDP 208
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUX6_9ARCH) HSP 1 Score: 90.9 bits (224), Expect = 1.890e-19 Identity = 44/113 (38.94%), Postives = 73/113 (64.60%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMAL----------WEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPV 309
QL +YS++ Y + + W++ + W+V +++VLG+AGG+LVA T+KY D++LKT A +GAI+++ V GH+ L PLD+ I +GA T++++ NY+ D PV
Sbjct: 223 QLGLYSLLMYGGIIMYESIFADDEAWDKRAAWSNWSVITVLVAVLGAAGGLLVAATLKYADSILKTLAAAGAIVLSTVLGHYLLTGPLDVVISIGAIVTIIAIANYTLDATPV 335
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNR6_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.360e-19 Identity = 46/102 (45.10%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWE-----EGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYS 291
QLA SI + +WE LF+GWT+N ++ ++ + GG+LVA T+KY D+VLKT ATSG+I+++AV G+F LG LD+ IG+G T+L++ NY+
Sbjct: 253 QLAFCSIWILSIVVVWEMQQSSRVELFKGWTINTWLIMLIQACGGLLVAATLKYADSVLKTLATSGSIVISAVLGYFLLGGDLDVFIGLGCVSTILAICNYT 354
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Hypothetical (protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RKE7_9CHLO) HSP 1 Score: 89.7 bits (221), Expect = 7.720e-19 Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWEE--GPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDD 297
QLA+YSI YLPMA W E G L +GWT +++L ++GGILVAL++ Y+++V KT A GA+++T V GH G+PL+ PI +G +LS+ Y DD
Sbjct: 253 QLAVYSIAIYLPMA-WVETDGHLLEGWTWLVWCIAMLHASGGILVALSVLYSNSVTKTVAVCGALVLTTVLGHVLFGAPLNGPILLGCAVVILSIFGYRDD 352
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Uncharacterized (protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6PD05_RETFI) HSP 1 Score: 88.2 bits (217), Expect = 1.090e-18 Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDG 300
QLA++S + Y P +L +G F+ WT I+S+LG++GG+LVA +MKYTDA++K ATSGAI++ A GG L P IP+ V + V+++ Y DG
Sbjct: 187 QLAVFSFLLYFP-SLHNDG-YFKNWTAITLIISILGASGGLLVAFSMKYTDAIIKALATSGAIVLAATGGAIWLNGPFGIPVAVSSISVVVAIFTYVTDG 284
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Match: Hypothetical (protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BES9_9EUKA) HSP 1 Score: 87.0 bits (214), Expect = 5.700e-18 Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 1 QLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYS 291
QLA YS+V YLP A+W LF GW+ ++++LG+ GGIL+ L + Y D+++K A S AII+TAV F P+ +PI G V+S++NY+
Sbjct: 247 QLASYSLVIYLPTAVWVNPSLFYGWSPLTWVVALLGAFGGILIGLVINYCDSIVKNLALSCAIILTAVIDFFCFAGPMTLPIIAAGGSIVVSIINYT 343 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8849.16943.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8849.16943.1 >prot_E_fasciculatus_S2_contig8849.16943.1 ID=prot_E_fasciculatus_S2_contig8849.16943.1|Name=mRNA_E_fasciculatus_S2_contig8849.16943.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=112bp MYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVback to top mRNA from alignment at E_fasciculatus_S2_contig8849:4021..4365+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8849.16943.1 ID=mRNA_E_fasciculatus_S2_contig8849.16943.1|Name=mRNA_E_fasciculatus_S2_contig8849.16943.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=345bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8849:4021..4365+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8849:4021..4365+ >mRNA_E_fasciculatus_S2_contig8849.16943.1 ID=mRNA_E_fasciculatus_S2_contig8849.16943.1|Name=mRNA_E_fasciculatus_S2_contig8849.16943.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=336bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8849:4021..4365+ (Ectocarpus fasciculatus EfasUO2)back to top |