mRNA_E_fasciculatus_S2_contig8846.16942.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8846.16942.1
Unique NamemRNA_E_fasciculatus_S2_contig8846.16942.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: Myosin (I, high molecular weight-Acanthamoeba sp n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH2_ECTSI)

HSP 1 Score: 765 bits (1975), Expect = 1.140e-260
Identity = 491/514 (95.53%), Postives = 501/514 (97.47%), Query Frame = 1
Query:    1 QVVLQEEKKVIHALRRGVEKQDYSTVKGLLAQAEKMGLSGEEVKQAQAMRLRIEGESICRDALTAATANKNLDELNLNLQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAGCQSSGISSGMDVEVAQKTMIELEREAHKLSEQQNMKQALVVAANTKMLDSITEAIAKAEAMKFRGQELADAYQAKRDVEEKDKVMSDVQAAMNSKDVVALGRALKEAERLNVDELXXXXXXXXXRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAKSAGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKSKMRGKGSKVQDRGGGHVYFMPYKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRVF 1542
            QVVLQEEKKVIHALRRGVEKQDYSTVKGLLAQAE+MGLSGEEVKQAQAMRLRIEGESICRDALTAATANKNLDELNLNLQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAGCQSSGISSGMDVEVAQKTM+ELEREAHKLSEQQNMKQALVVAANTKMLDSITEAIAKAEAMKFRGQELADAYQAKRDVEEK+KVM DVQAAMNSKDVVALGRALKEAERLNVDELXXXXXXXXXRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAK+AGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKSKMRG  S+++  GGG      YKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEV +++ 
Sbjct:  778 QVVLQEEKKVIHALRRGVEKQDYSTVKGLLAQAEQMGLSGEEVKQAQAMRLRIEGESICRDALTAATANKNLDELNLNLQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAGCQSSGISSGMDVEVAQKTMVELEREAHKLSEQQNMKQALVVAANTKMLDSITEAIAKAEAMKFRGQELADAYQAKRDVEEKEKVMEDVQAAMNSKDVVALGRALKEAERLNVDELXXXXXXXXXRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAKAAGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKSKMRGCVSQLRG-GGGSRTINRYKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVYLQIM 1290          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI4_9PHAE)

HSP 1 Score: 658 bits (1697), Expect = 1.450e-218
Identity = 439/518 (84.75%), Postives = 451/518 (87.07%), Query Frame = 1
Query:    4 VVLQEEKKVIHALRRGVEKQDYSTVKGLLAQAEKMGLSGEEVKQAQAMRLRIEGESICRDALTAATANKNLDELNLNLQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAGCQSSGISSGMDVEVAQKTMIELEREAHKLSEQQNMKQALVVAANTKMLDSITEAIAKAEAMKFRGQELADAYQAKRDVEEKDKVMSDVQAAMNSKDVVALGRALKEAERLNVDELXXXXXXXXXRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAKSAGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKSKMR----------------GKGSK----VQDRGGGHV---------------YFMP------------YKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTV 1416
            VVLQEEKKVIHALRRGVEKQDY TVKGLLAQAEKMGLSGEEVKQAQAMRLRIEGESICRDALTAATANKNLDELNLNLQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAGC+SSGISSGMDVEVA+KTM+ELEREAHKLSEQQNM+QALVVA NTKMLDSITEAIAKAEAMKFRGQELADAYQAKRDVEEK+KVM DVQAAMNSKD+VALGRALKEAERLNVDEL         RNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAK+AGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKSKMR                G+  +    ++D GG  V               + M             YKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTV
Sbjct:  773 VVLQEEKKVIHALRRGVEKQDYGTVKGLLAQAEKMGLSGEEVKQAQAMRLRIEGESICRDALTAATANKNLDELNLNLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAGCESSGISSGMDVEVARKTMVELEREAHKLSEQQNMRQALVVATNTKMLDSITEAIAKAEAMKFRGQELADAYQAKRDVEEKEKVMEDVQAAMNSKDIVALGRALKEAERLNVDELDALSELQEVRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAKAAGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKSKMREALEFAEEQELNLEMMGRVRRALRRIEDAGGAGVMEGALSTMTEEDIEKFRMERDERHAKAANPRYKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTV 1290          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: Myosin (I, high molecular weight-Acanthamoeba sp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP0_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.700e-64
Identity = 183/518 (35.33%), Postives = 276/518 (53.28%), Query Frame = 1
Query:    7 VLQEEKKVIHALRRGVEKQDYSTVKGLLAQAEKMGLSGEEVKQAQAMRLRIEGESICRDALTAATANKNLDELNLNLQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAGCQSSGISS--GMDVEVAQKTMIELEREAHKLSEQQNMKQALVVAANTKMLDSITEAIAKAEAMKFRGQELADAYQAKRDVEEKDKVMSDVQAAMNSKDVVALGRALKEAERLNVD-ELXXXXXXXXXRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAKSAGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKS---KMRGKGSKVQDRGGGHVYFMPYKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRVF 1542
            +L+EE+++   LR  +EK+D   +  LLA+A+ +G+  EE K A+A++ RIE E   +  L  AT   + + +                                                    +  C ++G+++   +D+  A++          +++ Q   K AL +A  T+ LD I E++ KA+A    G+E+ DA   + ++  K +V  ++QAAM +KD+ ALG AL+EAE L+++ EL         +N++NREEK+ EVKA+L  GV  E+L  LNKA+ MA+ELGC+ D  V   +A Q  LT    + SK          KM       R+ L+  EE  +E +          M+       R E   +    L   L ++S+S   + R +  K   + G   Y    KF NYPRLR+ SDY++G+LL+K+RE ++ML WQNTV+NKSLT++ K+ VK+A+ VRKSLLGYMGDKQM+FPETLAQNIL KGLDKPK+RDE  +++ 
Sbjct:  900 ILEEERQLRLELRDCIEKRDIKAIDELLARAQVLGIVNEETKNAKALKARIEEEGNTK--LKVATLGSDSEAI-------------------------------------------------AAVITRCMAAGMATKYAVDINAAKEKQ-------RQIANQSKAKHALELALRTRSLDRIEESLVKADACGLTGREVEDARIMRAELARKRQVFQEIQAAMQAKDMDALGAALREAEILDMEAELLEYTELQEMKNSMNREEKIAEVKAKLSAGVGAEDLQALNKAMAMAIELGCEGDVDVQQLEA-QAMLTQALASLSK---------AKM-------RDALEFAEELELELE---------MMIRVRRALRRIEVMRDDDAPLDGGLHTMSESDIEQFRAERDKRHAKAGNPKY----KFQNYPRLRSRSDYARGTLLYKRREQEKMLCWQNTVANKSLTDLDKDLVKEAIAVRKSLLGYMGDKQMAFPETLAQNILFKGLDKPKLRDEAYLQIM 1329          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: MyTH4 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z597_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.360e-42
Identity = 98/198 (49.49%), Postives = 119/198 (60.10%), Query Frame = 1
Query: 1093 MVESSILKDRGEKQLEAQNMLTQALASLSKSKMRGKGSKVQDR----------------------------GGGHVYF--------------------MPYKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRVF 1542
            MV+   L+DR  +QLEAQ MLTQALASLSKSKMR      ++                             GG H                         YKF NYP+LR+ SDY+KG LLHKKRE ++ML WQNTV+NKSL ++ K+ VKDA+ +RKSLLGYMGDKQMSFPETLAQNIL+KGLDKPK+RDE  +++ 
Sbjct:    1 MVKGVALEDRCLQQLEAQAMLTQALASLSKSKMRDALEFAEELELELEMMVRVRRALRRIEVMRDDDAPLDGGLHTMSDTDIEQFRAERDKRHTKAANPKYKFQNYPQLRSRSDYTKGLLLHKKREQEKMLSWQNTVANKSLVDLDKDLVKDAIAIRKSLLGYMGDKQMSFPETLAQNILVKGLDKPKLRDEAYLQIM 198          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD73_9STRA)

HSP 1 Score: 139 bits (349), Expect = 4.370e-31
Identity = 122/398 (30.65%), Postives = 192/398 (48.24%), Query Frame = 1
Query:  502 ALVVAANTKMLDSITEAIAKAE--AMKFRGQELADAYQAKRDVEEKDKVMSDVQAAMNSKDVVALGRALKEAERLNVDELXXXXXXXXXRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAKSAGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKSKMRGKGSKVQDR-----GGGHVYFM--------------------------------------------PYKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRVF 1542
            AL VA   K   S+  AIA+A+   +     E+ DA  A    +   ++   +  A+ + D   + + L+EA+RL +D           R  + RE  V E    L++G    +L  LN+ALE  + LG     Q+ AA  ++ +LT  + A+   +++ R + +K QS  G++  D+  + EA+ EAK+ GV +  S M     L  + EKQ++ QN L  AL S +++ ++    K +D          V  M                                             + F N+  LR+P D+++G +L+KK+  + ML+WQNT+ +KSL E+     K AV V K+LLGYMGDKQMSFP TLAQ+IL KGL+   +R+E+  +V 
Sbjct:  394 ALRVATLAKDPASLEAAIAQAQDCGVTAVDYEMEDAMLALEAAKNYSRINDGLSDAVAASDFDTMRQLLEEADRLEID----GDGVLLARVIMERERSVAETMEALRKGSEERDLQKLNEALESTIALGLT-GPQITAAHELRDKLTIEENAQGGVIAAMRTMELKAQSPGGISPGDIQPLVEAISEAKANGVPDDTSKMRAGRDLVVQMEKQIQVQNELDSALRSKNRNALKDALDKAEDMELQLASQDEVKQMLKELDAQYRAQQEEEDLDTIPLDEAEAERLKQERLERQRRAANPKFNFRNFNGLRSPDDFARGVVLNKKKVKEGMLKWQNTLISKSLLELDTNMQKLAVQVHKALLGYMGDKQMSFPATLAQDILQKGLENIPLRNEIYCQVM 786          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: Uncharacterized (protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CB23_CAFRO)

HSP 1 Score: 103 bits (256), Expect = 2.620e-19
Identity = 109/403 (27.05%), Postives = 182/403 (45.16%), Query Frame = 1
Query:  511 VAANTKMLDS--ITEAIAKAEAMKFRGQELADAYQAKRDVEEKDKVMSDVQAAMNSKDVVALGRALKEAERLNVDELXXXXXXXXXRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAKSAGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLS---------------------------------KSKMR-----------------------GKG-SKVQDRGGGHVYFMPYKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRVF 1542
            + A+ K LD+  +  A +KA  +      LA+A +A R ++E   + S + AA++SKD+ ++    +E E   V               + RE+   E KA L+  V   +  +L +AL  A ELG +  ++V  A+ +Q ++ +  E  S   ++ +AL  K QSK+GV   D+  ++EA+ EA + G+   +  + E+   K + E+ L  Q+ L   LA  +                                 K+ +R                        +G  K ++          +++  Y R+RTP  ++ G    KK+     L WQ  V +KS+T++P+     A  + KS+LGY GDK MSFP  LA NIL KG+++P V DE+ V+V 
Sbjct: 1259 IKASVKALDAEALAAATSKATTLGVSASVLAEAEEAARQIDETLALDSRLGAALDSKDMDSIISVYEECEAKGVT----PPKMAAASAVVKREKGTRETKAMLERAVESGDGQVLREALARATELGVK-GAEVDRAKELQDKIASERELASALRAAMKALETKAQSKAGVEPVDIAPLDEAIDEAIANGLAADSEAVSEAQEFKLKMERVLVVQSELAGLLAEAAAQTGXXXXXXXXXXXXXXXXEDLGMVCGVVRKAKATVRELERARFEEAADDDFEPEDDGIDAEGLQKQREELFAKASHPKFEWTKYNRIRTPDSFASGVYFGKKKIKANQLVWQANVLHKSMTDLPRGLSHVAKNIHKSILGYCGDKTMSFPPMLAANILEKGIEEPAVVDEIYVQVL 1656          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: Uncharacterized (protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CSV2_CAFRO)

HSP 1 Score: 102 bits (254), Expect = 4.610e-19
Identity = 81/238 (34.03%), Postives = 119/238 (50.00%), Query Frame = 1
Query:  976 RALTVKMQSKSGVTREDLDLMEEAMVEAKSAGVNEAASYMVESSILKDRGEKQLEAQ--------------NMLTQALAS-----LSKSKMRGKGSKVQD---------------------------RGGGHVYFMPYKFV--NYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIP-KEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRVF 1542
            +AL  K QSK+GV   D+  +++A+ EA S G+   + ++VE++ LK+R EK L  Q              + L + LA      L  S ++    K++D                           R   +   M  K+V   Y R+RTP  ++KG +  KKR     L WQ+T  N+SL E+P K   K A  + K++LGY GDKQMSFP  LAQ+IL KGLD+ ++RDE+ + V 
Sbjct: 1409 KALDNKAQSKAGVELADVAPLQDALDEALSRGLPADSEHVVEANKLKERMEKVLALQADLEAILEEPKPRKSQLNKLLAKAQDLDLKSSLVKKATRKLRDVEAAERDADDFDEXXXXXXXLDELKAKREETYTKAMDPKYVWSKYSRIRTPESFAKGVMFGKKRLMANQLTWQSTTINRSLLELPNKPLNKMATRLHKNILGYCGDKQMSFPAMLAQDILQKGLDEAELRDEIYLLVL 1646          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: MyTH4 (domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UF54_9ARCH)

HSP 1 Score: 95.9 bits (237), Expect = 2.750e-17
Identity = 79/265 (29.81%), Postives = 128/265 (48.30%), Query Frame = 1
Query:  898 QVVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAMVEAKSAGVNEAASYMVESSILKDRGEKQLEAQ----------NM-----------------------LTQALASLSKSKMRGKGSKVQDRGGG----------------HVYFMP-YKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIP-KEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRV 1539
            +V AA+A + RL   +E      ++ + + VK++SK+GV  +DL L+ +A+ +A   G+ + + +M E+    +R +  L+ Q          NM                       L + L SL  ++      +  D   G                    MP Y++V Y R+R+  +++KG LL+K R     L W N+V   S+ +   KE +K AV + K++LGY G+K MSFP TLAQ+IL KGL+ P + DEV V++
Sbjct:    6 EVNAAKAQKLRLEEENELAGDVRATMKMIDVKLESKAGVGEQDLQLLTDAITDASGKGLTDQSPFMQEARRAVERVQTLLKLQEEMASMLGKDNMRAIRKVLDQAEDMNLSNSPAAKRLREHLRSLEVARAHAATDETADVAAGPSLSDDEMKRQRDEKWRKAAMPKYQWVKYSRMRSADEFAKGILLNKSRVKAGQLRWANSVIPTSMLDFTNKELIKCAVRINKNVLGYCGEKSMSFPATLAQDILGKGLEVPDLVDEVYVQI 270          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FEI0_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.220e-17
Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 1249 YKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRVF 1542
            + F  YP LRTP D++K  +L K++  + ML W N +  KSL E+P +  K A+ + KSLLGYMGDK MSFP TLA++IL  G +  K+RDE+ +++ 
Sbjct: 1326 FHFRLYPGLRTPDDFAKTVILQKRKLKEGMLNWSNNLIPKSLIELPSDDSKMAIQIHKSLLGYMGDKVMSFPATLAESILTTGHENIKLRDEIYMQIM 1423          
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Match: Myosin-6 (n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G113_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 9.280e-16
Identity = 42/97 (43.30%), Postives = 68/97 (70.10%), Query Frame = 1
Query: 1249 YKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQNTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGLDKPKVRDEVSVRV 1539
            Y+F  + R+RT  DY KG   +KKR A+  L++Q TV  +S+ E+ K+  K A+ + +S+LGY G++ MSFP TLAQ++L+KGL+ P + DE+ +++
Sbjct: 1205 YQFRKFYRIRTDGDYVKGLYFNKKRVAELKLQYQKTVIPRSILELDKDLNKTAINIHRSILGYCGEQLMSFPATLAQDVLIKGLELPDLVDEIYIQL 1301          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8846.16942.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
Myosin1.140e-26095.53I, high molecular weight-Acanthamoeba sp n=1 Tax=E... [more]
Uncharacterized1.450e-21884.75protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Myosin1.700e-6435.33I, high molecular weight-Acanthamoeba sp n=1 Tax=T... [more]
MyTH41.360e-4249.49domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical4.370e-3130.65protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Uncharacterized2.620e-1927.05protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CB23... [more]
Uncharacterized4.610e-1934.03protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CSV2... [more]
MyTH42.750e-1729.81domain-containing protein (Fragment) n=1 Tax=archa... [more]
Hypothetical4.220e-1746.94protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Myosin-69.280e-1643.30n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8846contigE_fasciculatus_S2_contig8846:130..5729 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score783.9
Seed ortholog evalue4.7e-224
Seed eggNOG ortholog2880.D7FVH2
Preferred nameMyo22
Model size1542
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG4229@2759
Cds size1542
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8846.16942.1prot_E_fasciculatus_S2_contig8846.16942.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8846 130..5729 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842539.3207755-CDS-E_fasciculatus_S2_contig8846:129..3211696842539.3207755-CDS-E_fasciculatus_S2_contig8846:129..321Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 130..321 -
1696842539.336938-CDS-E_fasciculatus_S2_contig8846:895..9981696842539.336938-CDS-E_fasciculatus_S2_contig8846:895..998Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 896..998 -
1696842539.346133-CDS-E_fasciculatus_S2_contig8846:1941..19691696842539.346133-CDS-E_fasciculatus_S2_contig8846:1941..1969Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 1942..1969 -
1696842539.3574767-CDS-E_fasciculatus_S2_contig8846:2035..22351696842539.3574767-CDS-E_fasciculatus_S2_contig8846:2035..2235Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 2036..2235 -
1696842539.3667235-CDS-E_fasciculatus_S2_contig8846:3080..33671696842539.3667235-CDS-E_fasciculatus_S2_contig8846:3080..3367Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 3081..3367 -
1696842539.3759522-CDS-E_fasciculatus_S2_contig8846:3875..40461696842539.3759522-CDS-E_fasciculatus_S2_contig8846:3875..4046Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 3876..4046 -
1696842539.385166-CDS-E_fasciculatus_S2_contig8846:4431..46541696842539.385166-CDS-E_fasciculatus_S2_contig8846:4431..4654Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 4432..4654 -
1696842539.394249-CDS-E_fasciculatus_S2_contig8846:4894..50701696842539.394249-CDS-E_fasciculatus_S2_contig8846:4894..5070Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 4895..5070 -
1696842539.4044006-CDS-E_fasciculatus_S2_contig8846:5567..57291696842539.4044006-CDS-E_fasciculatus_S2_contig8846:5567..5729Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8846 5568..5729 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8846.16942.1

>prot_E_fasciculatus_S2_contig8846.16942.1 ID=prot_E_fasciculatus_S2_contig8846.16942.1|Name=mRNA_E_fasciculatus_S2_contig8846.16942.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=514bp
QVVLQEEKKVIHALRRGVEKQDYSTVKGLLAQAEKMGLSGEEVKQAQAMR
LRIEGESICRDALTAATANKNLDELNLNLQKASEMGLSGPEVDRAKAVQK
ELHVSHASLKALRTAVKSRHLESIKTALAGCQSSGISSGMDVEVAQKTMI
ELEREAHKLSEQQNMKQALVVAANTKMLDSITEAIAKAEAMKFRGQELAD
AYQAKRDVEEKDKVMSDVQAAMNSKDVVALGRALKEAERLNVDELDELSE
LQEVRNALNREEKVVEVKARLKEGVMGENLALLNKALEMALELGCQEDSQ
VVAAQAVQKRLTTCDEARSKTMSSQRALTVKMQSKSGVTREDLDLMEEAM
VEAKSAGVNEAASYMVESSILKDRGEKQLEAQNMLTQALASLSKSKMRGK
GSKVQDRGGGHVYFMPYKFVNYPRLRTPSDYSKGSLLHKKREADRMLEWQ
NTVSNKSLTEIPKEFVKDAVTVRKSLLGYMGDKQMSFPETLAQNILMKGL
DKPKVRDEVSVRVF
back to top

mRNA from alignment at E_fasciculatus_S2_contig8846:130..5729-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8846.16942.1 ID=mRNA_E_fasciculatus_S2_contig8846.16942.1|Name=mRNA_E_fasciculatus_S2_contig8846.16942.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5600bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8846:130..5729- (Ectocarpus fasciculatus EfasUO2)
CAGGTCGTTCTCCAGGAAGAGAAGAAGGTGATCCACGCGCTCAGGAGGGG CGTCGAGAAACAGGACTACAGCACCGTAAAGGGGCTGCTGGCGCAAGCGG AGAAGATGGGGCTATCCGGGGAGGAGGTGAAGCAGGCGCAGGCCATGCGT CTTCGCATCGAGGTGGGTGGTCATCGTCGTCATCGTCGTGGCTGGTACCG AGCAAGCGTTAGCGTTGTCAAGGGTGTGTTGCTGAAGCGTGGTGTTGTGG TGGTGTACTTGGCGGACGGCTCTCTGAACATTCCCGCCTGCTGCTTTTGT AAGGACCTGAAGGGAAACGAACTAGCTCCCACGCTTTTTTTTTTCTTTTC TGTCAGTGCCTGTGTGTATGCTTTGCTGCTGCCTAAAATACTGTTATACT TCTTGTGGTCCTTGGCTTGCTCACAATAGTTAAACTCAGCTCCTGCGTGA GCCTCATTATTGCTTTCTCTGCGCCCTGTGTTATTCCCCTGTGCTATCTT CCGTTTCCCTGTGTTACCCCCCGTGTTACCTTCCGTTTCCCCGTGTTACC CTCCTCGTGTTACCTTGGGCTTCTCTTTTTGACCCCCCGCACGTGCTATC TTCCTTTTCCCTGTCTCATCTTACATCTTACCGCCCGTGTTATCTTCCGT TTCCTTCAGGGGGAGTCGATCTGCCGGGACGCCCTTACTGCCGCCACGGC CAACAAGAACCTCGACGAGCTCAACCTCAACCTACAGAAGGCCTCGGAGA TGGGTCTGTCAGGGCCGGAGGTTGACCGCGCCAAGGCCGTCCAGAAGGAG TTGCACGTCAGCCACGCCAGCCTCAAGGCTCTCAGGTGTGTGTGTGTGTG TGTGTTTTACTATTAGCATCAACCGCGCTAGCCGACTGACCAATGAAAAA GACGTTAGTCCAAGCACGGTAGAAAGCTCCGTGGTTGTGTGCGTGTCATA CACACACCAAAAGAAACATTAACATTTATCGTCGTCGATGATAATCTCAT GCATACGATATATTAACGATGACTTATATTTTCCTTGAATCATTTTGCAT TCGTGCGTGTGTGGGTTTGATACAGGACGGCGGTGAAGTCGAGGCACCTG GAGAGCATCAAGACCGCTCTGGCCGGCTGCCAGTCGTCGGGCATCTCGTC CGGCATGGACGTCGAGGTGGCCCAGAAGACCATGATCGAGCTAGAGAGGG AGGCGCACAAGCTCTCCGAGCAGCAGAACATGAAGCAGGCCCTCGTGGTG GCCGCGAACACGAAGATGCTGGACTCGATCACGGAGGCCATCGCCAAGGT GGGTGCTCCGCAGAATCATGGTACTGGTAGGATGGATTGATGTAGTGCCC CTTCTGGCCTAATCCCCTTGATTTGTTTTGTTCTCGCCGGCGTACTGTAT GCTTTTTGATTCACCGGTGTCGGTCGCTCTAGAAGAAATGTTGGTACCGC ACGGCTGCACAGCTCGGTCATGTTTTGGATGTGGCAGCCTTGTTGGCTAC CCCCCTCCTCTTTTTCTCTCGCAGGCGGAGGCGATGAAGTGTTGTTTCTA TAACTCAAATCACCGGTGTCGATCTAGAATAAACGGTGTTACACACGTAT GCACACCACATTCATGATGTAATGCCCTGGTTGCCTACCCCCCCCCCTCT CCCCCCTCCCCCTATTTTTTTGTCACCTCGCAGGCGGAGGCGATGAAGTT CCGGGGCCAGGAGCTGGCGGACGCGTACCAGGCGAAGAGGGACGTGGAGG AGAAGGACAAGGTGATGTCGGACGTGCAGGCGGCGATGAACAGCAAGGAC GTCGTGGCTCTCGGGAGGGCCCTCAAGGAGGCAGAGCGGCTCAACGTCGA CGAGGTGAACACGCCTGCCTTCTCTCTACGTTGGTTGGTGTGGTCTTCGG TTTTTTATGCTTGTGGTGGTCACCAGAGTTGTCTCCATCTACTGCTGTGT GTGTAGGTTTTCTGTGTTGTGTTTTGGAGCTTTTTGTGTCCGAGCGTGTC AATGTCGAAGAGGTGAAAACGGCGAAAACCTCTGGTCCGTCCGTTGATTG TGTGGTCTTTGATTTTTGTTATGGTGGTCGTCGGAAGGTCGTCTCTTATC TATTTTGTTGTTTTGTGTTGGAATTTTTTTTGTATTGTTGACCGCTGATT TTTGCTCACGTAATATTTTCGTCGGCGGCGCCAGCGTCACACCTACTGCT GTGCGTACACAAGACATTCCTTCGATGTGGGTATTTTCTCGAACGGGTGG TCTTGCTGTGCTGTAACTGTATCAAGGCATCAAAAGGAAGCTGTTGATAT CTAGATCGATTCCCCCACTCACACACACAATTTCTGGTGCCGCAAAACAC GCACACGCACAGCTGGACGAGCTGTCGGAGCTTCAGGAGGTGCGCAACGC CCTCAACCGCGAGGAGAAGGTGGTGGAGGTGAAGGCCAGGCTCAAGGAGG GGGTGATGGGGGAGAACCTCGCCCTCCTCAACAAGGCGCTCGAGATGGCG CTCGAGCTGGGTTGCCAGGAGGACAGCCAGGTGGTGGCGGCCCAGGCGGT GCAGAAGAGGCTGACGACGTGCGACGAGGCCCGGAGCAAGACCATGTCCT CGCAGCGGGCCCTCACGGTGAAGATGCAGAGCAAGTCGGGGGTCACAAGG TGGGTGGTCGGTCACCCGCTAGCTAGCGTCGTTGGTTGTTGCTGGTGACG GTGACGGTGACGGTGGTTGGCTTGGTGCGCAGGCACAGGCACCACGGCAA GACAAGAATTGTCGTCGAGATACGCATGGTAATTTGTCTGCGGTGGTGAA GAAAACTTGAACACATCTCGTTCGACTATTATGTGGTGTTATTATGTCTC GAACGGGTAGGGTAGGCTTTCTGTGTTCCTGTTTATTGTCCTCAGATGCA GAGAGAGTAATTCGGGGGGGGCGAGGCGGGTGGTGCCAGCTTGCTCGCGT TGAACATAGTTTTACCTTTCTGCCCTGTTGTTGCGTGTTGGCTGGTTTCG CACGAAGGTCCTTTTCCGGAGGCTTCGTTGCGTCCCTTGGGTACCTTCAC TCTTTCCCCCCGTGCTCAAGCAGGAGAGGGTGTTAAATAGTGATCCATAT TGTATTCGAGAGCAGGAACAAAGCAGAAGGTTGCAGAGACGTTGCTGTTG AAATCTGGGTTTTGTGAAAGCGGGAGAGTATTGTTGATTGGTGGTTGTTG GGTGTCTTGGCGTACACCGCCCACAAGAGGCGGCAAAAATGGTGGTAATG GGCTAGAGAGAGCAAGTCGGGGGTCACAAGGTGGGTGGGGTGCGGGAGGG TCTGCGTAATATCCAGTACCTCCATTTGCACTGACACATACGCTACAACG TTTGTCTATTTTTGAGGGAGGGCTTGACCTAACCTTGTGTTGTCCACATC TGGACATGCGCATTTTCTCTCTTTTGTTCAGGGAAGACTTGAACTGACTT GTGTTTTTTCCCAATTCGTGTTTTTTCCTGTTTTTTTTTTTCAGGGAGGA CTTGGACTTGATGGAGGAGGCCATGGTAGAGGCGAAGTCCGCGGGTGTAA ACGAAGCGGCCTCGTACATGGTGGAGTCGTCCATCCTCAAGGACCGGGGA GAGAAGCAGCTCGAGGCGCAGAACATGCTCACGCAAGCGCTCGCCAGCCT CAGCAAGTCGAAGATGAGAGGTAAAGGCAGTAAAGTACAGGATCGTTGCC ATGCACATGCCATCCGTTCATTATGTCGTGGTTGATTTCGAGCCCCATGA CTACCCGCAGGGGGGGGGGGTCATGTATACTTCATGCCGTAGTCGCTAGA CCGTTGACCTCGCATTCCCACAATGCCGGGGCGGAGCGATATGCCGGGTT TTCGCCGGCCCAGGCTACGGGCAGGGGAGGGGTTCCGCACTATCAGCAGA TAGGTATAGGTGACGCTGTGCTGGACGTTCGACATCGGCCGGCCACCGAG ATTGAACTTTTCACCCGCTTGTTGGTGCCAGTGCCTTCACATGCTATCAC GTGCTATTGTTATTCGGAAAAATAAATACAAACACAGACAGACAACCTAC TTTTGTGTTGAACCTTCCTGTTGTTGTTGTTGTTGCCCCCCCCCCCCCCC CCCCCCCCGCCCGTGGGGNNNNNNNNNNTTTTTTGTTTTTTTTTTTTTTT ATAAAAAAACAAAACCGAAGACGACATCCTTCTTTTTTTTTGTGTTGCTT TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCGTGGCCGTGGTGGT GGTGATGGTATGCTCCGCTCCGAGAGCAGAGGCGTTGGAGTTCGCCGAGG AGCAGGAGCTGAACCTGGAGATGATGGGTCGGGTCAGGCGCGCCCTGCGA AGAATCGAGGATGCGGGAGGCGCCGGGGTGATGGAGGGGGCTTTGTCGAC CATGACCGAGGAAGACATCGAGAAGTTCCGGATGGAGCGCGACGAACGCC ACGCCAAGGCGGCTAACCCGAGGTACGGTACGGCAGGGGGGTCTGTTGCT GGCGTTTGTCTCGTATTTTGAGTGTATTGTTCCGTACTTTGAAGTGCGTT GTATGCGCGTTTGGCACCACGCACGACGCTAGGCAGGGCTATATCCTACT GGAGTATATACTTAAAAATAGTGTTGTACAGCAGTAAAGCTGGATGCTCC ACCGTAGTATGTTTTTTGTTGAGGAGATAACACGGTCAAATGTGCTTTGA CCGTAAGTATATGTCACTGAAAACCGGCCAGGTATAAGTTCGTCAACTAC CCGCGGCTCCGCACGCCTAGCGACTACTCCAAGGGGTCCCTGCTGCACAA GAAGAGGGAGGCGGACCGGATGCTCGAGTGGCAGGTGTGTGTGTGTGTGT GCTTGTTTTGTCTTTTTTTTTCAATTAGCAATGACCGCGCCAGCTGGCTG GCCAACGGCATATGTCAACCTTGCAGAAAAAAAACTGCAATCGTTCTTTC TACATTGAGGCTCTACCGTCAGGGGGTGGTTGTTGCCTGGGTGTGTCCCC ATCATGCTCGTTGGAATGGGGAGGGCATCACGGGCGTTGTAGTGCCATAT GTAGGGTCCTAAGTCGTAAGTGGCGAGCACGTAGACGTTACGCGCAGCAC GGACTAGTCTACCACACGTCGACCCACCATGTTTGGTGTTTGGGGAGGGA TCCGGTTATGGTTACTTTTTTTTTTCTTTCTTTCAGAAATTCGTTAAGCC AGCTCTTTTTTTTAGTGTTACAACACGGCAGGTTGGGATGAAATTTTCCT GCCTGTACTTTTTTAGTTGCACGATTTTTACTTGATTTGCATGTAGCATT TTCCTGTTTGCACAACACCGCGTTTTTTATCAGGTAAATTATCTCTTTTT TTTTCTGGCGTTTTTCAGAAGACGGTTCTTATTTTTTCTATTGTTGTTGT TGTTGCAGAACACTGTATCCAACAAGAGCTTGACGGAGATCCCCAAGGAA TTCGTCAAGGACGCGGTTACGGTGAGAAAGTCGCTCCTGGGCTACATGGG AGACAAGCAGATGTCCTTCCCGGAGACGCTGGCCCAGAACATCCTCATGA AGGGGCTCGATAAACCCAAAGTCAGGGACGAGGTGAGTGTTCGCGTTTTT
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8846:130..5729-

>mRNA_E_fasciculatus_S2_contig8846.16942.1 ID=mRNA_E_fasciculatus_S2_contig8846.16942.1|Name=mRNA_E_fasciculatus_S2_contig8846.16942.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1542bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8846:130..5729- (Ectocarpus fasciculatus EfasUO2)
CAGGTCGTTCTCCAGGAAGAGAAGAAGGTGATCCACGCGCTCAGGAGGGG
CGTCGAGAAACAGGACTACAGCACCGTAAAGGGGCTGCTGGCGCAAGCGG
AGAAGATGGGGCTATCCGGGGAGGAGGTGAAGCAGGCGCAGGCCATGCGT
CTTCGCATCGAGGGGGAGTCGATCTGCCGGGACGCCCTTACTGCCGCCAC
GGCCAACAAGAACCTCGACGAGCTCAACCTCAACCTACAGAAGGCCTCGG
AGATGGGTCTGTCAGGGCCGGAGGTTGACCGCGCCAAGGCCGTCCAGAAG
GAGTTGCACGTCAGCCACGCCAGCCTCAAGGCTCTCAGGACGGCGGTGAA
GTCGAGGCACCTGGAGAGCATCAAGACCGCTCTGGCCGGCTGCCAGTCGT
CGGGCATCTCGTCCGGCATGGACGTCGAGGTGGCCCAGAAGACCATGATC
GAGCTAGAGAGGGAGGCGCACAAGCTCTCCGAGCAGCAGAACATGAAGCA
GGCCCTCGTGGTGGCCGCGAACACGAAGATGCTGGACTCGATCACGGAGG
CCATCGCCAAGGCGGAGGCGATGAAGTTCCGGGGCCAGGAGCTGGCGGAC
GCGTACCAGGCGAAGAGGGACGTGGAGGAGAAGGACAAGGTGATGTCGGA
CGTGCAGGCGGCGATGAACAGCAAGGACGTCGTGGCTCTCGGGAGGGCCC
TCAAGGAGGCAGAGCGGCTCAACGTCGACGAGCTGGACGAGCTGTCGGAG
CTTCAGGAGGTGCGCAACGCCCTCAACCGCGAGGAGAAGGTGGTGGAGGT
GAAGGCCAGGCTCAAGGAGGGGGTGATGGGGGAGAACCTCGCCCTCCTCA
ACAAGGCGCTCGAGATGGCGCTCGAGCTGGGTTGCCAGGAGGACAGCCAG
GTGGTGGCGGCCCAGGCGGTGCAGAAGAGGCTGACGACGTGCGACGAGGC
CCGGAGCAAGACCATGTCCTCGCAGCGGGCCCTCACGGTGAAGATGCAGA
GCAAGTCGGGGGTCACAAGGGAGGACTTGGACTTGATGGAGGAGGCCATG
GTAGAGGCGAAGTCCGCGGGTGTAAACGAAGCGGCCTCGTACATGGTGGA
GTCGTCCATCCTCAAGGACCGGGGAGAGAAGCAGCTCGAGGCGCAGAACA
TGCTCACGCAAGCGCTCGCCAGCCTCAGCAAGTCGAAGATGAGAGGTAAA
GGCAGTAAAGTACAGGATCGGGGGGGGGGTCATGTATACTTCATGCCGTA
TAAGTTCGTCAACTACCCGCGGCTCCGCACGCCTAGCGACTACTCCAAGG
GGTCCCTGCTGCACAAGAAGAGGGAGGCGGACCGGATGCTCGAGTGGCAG
AACACTGTATCCAACAAGAGCTTGACGGAGATCCCCAAGGAATTCGTCAA
GGACGCGGTTACGGTGAGAAAGTCGCTCCTGGGCTACATGGGAGACAAGC
AGATGTCCTTCCCGGAGACGCTGGCCCAGAACATCCTCATGAAGGGGCTC
GATAAACCCAAAGTCAGGGACGAGGTGAGTGTTCGCGTTTTT
back to top