mRNA_E_fasciculatus_S2_contig8843.16941.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Zeaxanthin (epoxidase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I9_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 6.890e-133 Identity = 185/198 (93.43%), Postives = 187/198 (94.44%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKDRFVGWSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNMLKDVS 594
GVTVKLKDGGEVHADVLVGADGIWSQ VRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKD FVGWSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGN VLIGDACHPMMPNLGQGGCQAMEDGY+LTNMLKDV+
Sbjct: 245 GVTVKLKDGGEVHADVLVGADGIWSQ---------VRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKDHFVGWSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNAVLIGDACHPMMPNLGQGGCQAMEDGYILTNMLKDVT 433
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Zeaxanthin (epoxidase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX74_9STRA) HSP 1 Score: 318 bits (815), Expect = 7.850e-104 Identity = 149/199 (74.87%), Postives = 169/199 (84.92%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVR-GENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKDRFVGWSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNMLKDVS 594
GV V L+ G +H DVL+GADGIWSQ VRAQMW+E V+ G+N GATYSGYTVFAGETIY P+DYWDVGYKVYIGPGQYFVTSDIG+GRMQWYAFLALP G+K+R+DNI YLKDRF GWS +I EALD TSNNDVEQRDLYDR PS+ +SW+ G+ L+GDACHPMMPNLGQGGCQAMEDGY+LTNMLK+V+
Sbjct: 227 GVEVLLEGGKTMHGDVLIGADGIWSQ---------VRAQMWDEPVKNGKNSGATYSGYTVFAGETIYEPRDYWDVGYKVYIGPGQYFVTSDIGQGRMQWYAFLALPAGTKARDDNILYLKDRFKGWSEDISEALDATSNNDVEQRDLYDRRPSVMRSWSDGHVTLMGDACHPMMPNLGQGGCQAMEDGYVLTNMLKEVT 416
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F566_9CRYP) HSP 1 Score: 258 bits (658), Expect = 3.530e-80 Identity = 122/202 (60.40%), Postives = 148/202 (73.27%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKDRFVG-----WSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNMLKDV 591
GV V ++DG ADVLVGADGIWS VRAQ+WN+D +G G TYSGYT FAG+TI P Y+DVGY+VYIGPG+YFVTSD+GRGR QWYAFLALP G+KSR N +YL++ F WS E+ + LD T +EQRDL+DRPPSLTKSW++G+ +IGDA HPMMPNLGQGGCQA+ED Y+L+ +L V
Sbjct: 226 GVKVYMEDGTSEEADVLVGADGIWST---------VRAQLWNQDAKGPESGTTYSGYTCFAGDTIQKPDYYFDVGYQVYIGPGKYFVTSDVGRGRTQWYAFLALPEGTKSRASNRQYLQELFSKGKEGRWSEEVFKVLDATPEESIEQRDLFDRPPSLTKSWSKGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLSEILGSV 418
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Zeaxanthin (epoxidase, plastid-targeted n=5 Tax=Guillardia theta TaxID=55529 RepID=L1JNY8_GUITC) HSP 1 Score: 257 bits (657), Expect = 4.630e-80 Identity = 121/202 (59.90%), Postives = 150/202 (74.26%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKDRFVG-----WSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNMLKDV 591
GV V L+DG ADVLVGADGIWS +RAQ+WN+D +G G TYSGYT FAG+TI P Y+DVGY+VYIGPG+YFVTSD+GRGR QWYAFLALP G+KSR N++YL++ F WS E+ + LD T ++EQRDL+DRPPS+TKSW++G+ +IGDA HPMMPNLGQGGCQA+ED Y+L+ +L V
Sbjct: 223 GVKVYLEDGTCEEADVLVGADGIWST---------IRAQLWNQDAKGPKSGTTYSGYTCFAGDTIQRPDYYFDVGYQVYIGPGKYFVTSDVGRGRTQWYAFLALPEGTKSRASNLEYLQELFSKGKEGRWSEEVFKVLDATPEENIEQRDLFDRPPSVTKSWSKGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLSEILGTV 415
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Hypothetical (protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TSL7_HEMAN) HSP 1 Score: 254 bits (650), Expect = 7.140e-79 Identity = 119/202 (58.91%), Postives = 147/202 (72.77%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKDRFVG-----WSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNMLKDV 591
GV LKDG EV D+LVG+DGIWS +RAQMWN+D RG N G TYSGYT FAG+TI Y+DVGY+VYIGPG+YFVTSD+G+GR QWYAFLALP GSKSR N +YL + F WS E+ + LD T ++ ++QRDL+DRPPS+ KSW++G+ +IGD+ HPMMPNLGQGGCQA+ED Y+L L +V
Sbjct: 239 GVKATLKDGTEVTGDILVGSDGIWSS---------IRAQMWNQDARGPNSGTTYSGYTCFAGDTIQKTDYYFDVGYQVYIGPGKYFVTSDVGKGRTQWYAFLALPEGSKSRASNKEYLYELFNDGPEGRWSEEVFKVLDATPDDQIDQRDLFDRPPSVLKSWSEGHVTMIGDSVHPMMPNLGQGGCQAIEDAYVLAERLGEV 431
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW32_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.010e-76 Identity = 103/142 (72.54%), Postives = 118/142 (83.10%), Query Frame = 1
Query: 157 TYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKDRFVGWSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNML 582
TYSGYTVFAGET + DYWDVGYKVYIGP +YFVTSD+G GRMQWYAFLALPPG+KSRE N+ Y+KD F GWSPEIH LD T+ ND+EQRDLYDRPPS+ K W QG+ ++GDA HPMMPNLGQGGCQA+ED Y + +L
Sbjct: 2 TYSGYTVFAGETTFETPDYWDVGYKVYIGPNKYFVTSDVGCGRMQWYAFLALPPGTKSRESNLNYIKDHFEGWSPEIHLVLDVTAENDIEQRDLYDRPPSMLKRWNQGSVAILGDAAHPMMPNLGQGGCQALEDAYKIAEVL 143
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZK7_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.600e-76 Identity = 120/216 (55.56%), Postives = 145/216 (67.13%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENG------GATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKS----------------REDNIKYLKDRFVGWSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNML 582
GV V L DG AD+LVG+DGIWS VRAQM+ E+++G + G TYSGYTVFAGET+ DY++ GYKVYIGP +YFVTSD+G GR+QWYAF ALPPGSK E+ ++Y+K +GWS E+ LD T + VEQRDLYDRPP L +SWA+GN VL+GDA HPMMPNLGQGGCQA+ED YMLT +L
Sbjct: 28 GVIVNLADGTNADADILVGSDGIWSA---------VRAQMYGEEIKGSSPDLKKRQGCTYSGYTVFAGETVVKTPDYYETGYKVYIGPQRYFVTSDVGDGRIQWYAFFALPPGSKKAPSGWGGSTRDQQADPEENLVEYIKSLHLGWSDEVMTILDATPPSSVEQRDLYDRPPELLRSWAKGNVVLMGDAVHPMMPNLGQGGCQAIEDAYMLTEIL 234
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSE2_9CRYP) HSP 1 Score: 246 bits (629), Expect = 7.760e-76 Identity = 117/203 (57.64%), Postives = 144/203 (70.94%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSKSREDNIKYLKDRFVG-----WSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNMLKDVS 594
GV LKDG +V DVLVG+DGIWS +RAQMW++D RG G TYSGYT FAG+TI Y+DVGY+VYIGPG+YFVTSD+GRGR QWYAFLALP GSKSR N YL + F WS E+ + LD T ++ ++QRDL+DRPPS+ +SW+ G+ +IGDA HPMMPNLGQGGCQA+ED Y+L + V+
Sbjct: 230 GVRATLKDGTQVTGDVLVGSDGIWSA---------IRAQMWDQDSRGPKSGTTYSGYTCFAGDTIQRTDYYFDVGYQVYIGPGKYFVTSDVGRGRTQWYAFLALPEGSKSRASNKDYLYELFNDGPEGRWSEEVFKVLDATPDDQIDQRDLFDRPPSVLRSWSDGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLAEKMGGVT 423
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2G6N2_9DINO) HSP 1 Score: 243 bits (621), Expect = 8.300e-76 Identity = 114/200 (57.00%), Postives = 139/200 (69.50%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSK---SREDNIKYLKDRFVGWSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNMLKDV 591
GV V+L+DG E DV +GADGIWS RAQMW E +G G TYSGYTVFAGET+Y P+DY+DVGYKVY+GP +YFV SD+GRGR+QWYAF +P G++ S + YL F+GWS +I++ ++ T +E R LYDRPPS +SWA G L+GDACHPMMPNLGQGGCQAMEDGY+L L V
Sbjct: 115 GVRVRLEDGTEKECDVFIGADGIWSA---------TRAQMWGEAKKGPGSGCTYSGYTVFAGETVYRPEDYFDVGYKVYMGPKRYFVCSDVGRGRIQWYAFCGVPEGTELPASPDGKKDYLLSSFLGWSQQINDLVEATPAQAIEDRALYDRPPSFFRSWADGPVALMGDACHPMMPNLGQGGCQAMEDGYVLMQKLSAV 305
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UW46_9DINO) HSP 1 Score: 247 bits (630), Expect = 1.550e-75 Identity = 115/200 (57.50%), Postives = 140/200 (70.00%), Query Frame = 1
Query: 1 GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENGGATYSGYTVFAGETIYAPKDYWDVGYKVYIGPGQYFVTSDIGRGRMQWYAFLALPPGSK---SREDNIKYLKDRFVGWSPEIHEALDCTSNNDVEQRDLYDRPPSLTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGYMLTNMLKDV 591
GV V+ +DG EV D+L+GADGIWS RAQMW E +GE G YSGYTVFAGE +Y P+DY+DVGYKVY+GP +YFV SD+GRGR+QWYAF +P G++ S E +Y+K F+GWS +I + ++ T +E R LYDR PS KSWA G L+GDACHPMMPNLGQGGCQAMEDGY L L+DV
Sbjct: 269 GVRVRCEDGAEVECDILLGADGIWSA---------TRAQMWGEAKKGEGSGCNYSGYTVFAGEAVYQPEDYFDVGYKVYMGPKRYFVCSDVGRGRIQWYAFCGVPEGTELPASPEGKKEYVKSSFLGWSQQIGDLVEATPAQCIEDRALYDRAPSFLKSWADGPVALMGDACHPMMPNLGQGGCQAMEDGYTLMQKLRDV 459 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8843.16941.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8843.16941.1 >prot_E_fasciculatus_S2_contig8843.16941.1 ID=prot_E_fasciculatus_S2_contig8843.16941.1|Name=mRNA_E_fasciculatus_S2_contig8843.16941.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=198bp GVTVKLKDGGEVHADVLVGADGIWSQARRQRGWPRVRAQMWNEDVRGENGback to top mRNA from alignment at E_fasciculatus_S2_contig8843:107..5945+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8843.16941.1 ID=mRNA_E_fasciculatus_S2_contig8843.16941.1|Name=mRNA_E_fasciculatus_S2_contig8843.16941.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5839bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8843:107..5945+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8843:107..5945+ >mRNA_E_fasciculatus_S2_contig8843.16941.1 ID=mRNA_E_fasciculatus_S2_contig8843.16941.1|Name=mRNA_E_fasciculatus_S2_contig8843.16941.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=594bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8843:107..5945+ (Ectocarpus fasciculatus EfasUO2)back to top |