mRNA_E_fasciculatus_S2_contig8836.16931.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8836.16931.1
Unique NamemRNA_E_fasciculatus_S2_contig8836.16931.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: HSF_DOMAIN (domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB2_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 4.320e-91
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 1 
Query:   28 MDYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKKRGRDEKHPGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQGSSGTPSASSA 423
            MDYGFPPARGGRGAPSMFPRKLYQILCETDPEII+WD+DGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLY GFKKRGRDEK+PGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQGSSGTPSASSA
Sbjct:    1 MDYGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLY-GFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQGSSGTPSASSA 131
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: HSF_DOMAIN (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR2_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 2.310e-85
Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 1 
Query:    1 MSRGEGQDGMDYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKKRGRDEKHPGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQGSSGTP 408
            MSRG GQDGMDYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWD+DGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLY GFKKRGRDEK+PGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQGSSG P
Sbjct:    1 MSRGLGQDGMDYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLY-GFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQGSSGAP 135
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.950e-23
Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 1 
Query:   31 DYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKKRGRDEKHPGHYYHPYFQRDRPEILGGVRRS 357
            DY   P  G RGAP +FPRKL+++L + D  +I WDE+G+ F I + + +    +  +++H+K TSFQRQLNLY GF+K  + E+  G+Y HP+FQRD PE L  VRR+
Sbjct:   44 DYKRYPRTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLY-GFRKIAKGER-CGYYVHPHFQRDHPEWLSKVRRT 150
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.840e-22
Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 1 
Query:   46 PARGGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKK--RGRDEKHPGHYYHPYFQRDRPEILGGVRR 354
            P  G RGAP +FPRKLY+IL     +II W + GKSF I   E ++  ++  ++RH K +SFQRQLNLY GF+K  +G D    G Y H  F RD+PE+L  VRR
Sbjct:    4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLY-GFRKVQKGTDV---GSYAHECFIRDQPELLTKVRR 104
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.450e-20
Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 1 
Query:   46 PARGGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKK--RGRDEKHPGHYYHPYFQRDRPEILGGVRR 354
            P  G RGAP +FPRKLY+IL     ++I W   GKSF I   E ++  ++  ++RH K +SFQRQLNLY GF+K  +G D    G Y H +F RD+PE L  VRR
Sbjct:   96 PRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLY-GFRKIQKGPDT---GAYAHEHFLRDQPESLTFVRR 196
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.280e-19
Identity = 54/116 (46.55%), Postives = 71/116 (61.21%), Query Frame = 1 
Query:   22 DGMDYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKKRGRDEKHPGHYYHPYFQRDRPEILGGVRRSYPVT 369
            D M Y   P  G RGAP +FPRKLY+IL     + ISW E G SF I + E ++  V+  ++RH K +SFQRQLNLY GF+K  +  +  G Y H +F RD+ + L  VRR+  VT
Sbjct:   61 DAMRY---PRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLY-GFRKISKGTE-TGAYCHEFFARDQTDKLRLVRRTPQVT 171
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: HSF-type (DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z401_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.790e-19
Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 1 
Query:   46 PARGGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKK--RGRDEKHPGHYYHPYFQRDRPEILGGVRR 354
            P  G RGAP  FPR+LY+IL E DP I+SW + G+ F + N   +    +  ++RHN  TSFQRQ NLY GFKK  RG D    G YYH +F+  R E L  +RR
Sbjct:   55 PKTGKRGAPQAFPRRLYEILQEEDPSIVSWVKGGEGFKVNNMHLFANKTLVNYFRHNNYTSFQRQCNLY-GFKKLTRGPDT---GMYYHEHFKAGRYEDLNNIRR 155
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTE1_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 8.410e-19
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 1 
Query:   79 FPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKKRGRDEKHPGHYYHPYFQRDRPEILGGVRRS 357
            FPR+LY +L + D +IISWD DGKSF I +   +   V+P ++RH++LTSFQRQLN+Y     R         Y HP FQR RP++L  V+R+
Sbjct:   35 FPRRLYDMLTKEDVKIISWDHDGKSFRILDANLFSSQVLPKYFRHSRLTSFQRQLNMYGFLYLRNNGGAGQYVYMHPNFQRGRPDLLHSVKRT 127
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: Heat (Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 4.820e-18
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 1 
Query:   55 GGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKKRGRDEKHPGHYYHPYFQRDRPEILGGVRRSY 360
            G RG+   F   L+QIL   DP++I W   GK+F I + E++ + +MP F++ NK +SFQRQLNLY GF+K  R  +  G Y HP F+R +PE L  VRR +
Sbjct:   44 GKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLY-GFRKLVRGNE-AGGYMHPLFERGKPEQLSQVRRGF 143
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Match: HSF_DOMAIN (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 5.320e-18
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 1 
Query:   55 GGRGAPSMFPRKLYQILCETDPEIISWDEDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKKRGRDEKHPGHYYHPYFQRDRPEILGGVRRSY 360
            G RG+   F   L+QIL   DP++I W   GK+F I + E++ + +MP F++ NK +SFQRQLNLY GF+K  R  +  G Y HP F+R +PE L  VRR +
Sbjct:   21 GKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLY-GFRKLVRGNE-AGGYMHPLFERGKPEQLSQVRRGF 120
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8836.16931.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
HSF_DOMAIN4.320e-9196.97domain-containing protein (Fragment) n=1 Tax=Ectoc... [more]
HSF_DOMAIN2.310e-8596.32domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical4.950e-2347.71protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Hypothetical5.840e-2249.52protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
Hypothetical3.450e-2048.57protein (Fragment) n=1 Tax=Florenciella parvula Ta... [more]
Hypothetical2.280e-1946.55protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
HSF-type5.790e-1948.57DNA-binding-domain-containing protein n=1 Tax=Trib... [more]
Hypothetical8.410e-1947.31protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Heat4.820e-1846.08Shock transcription factor (Partial) (Fragment) n=... [more]
HSF_DOMAIN5.320e-1846.08domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8836contigE_fasciculatus_S2_contig8836:473..3496 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score272.7
Seed ortholog evalue1.1e-70
Seed eggNOG ortholog2880.D8LLB2
Model size474
KEGG koko:K09414,ko:K09419
KEGG Pathwayko04212,ko05134,map04212,map05134
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG5169@1,KOG0627@2759
Cds size474
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842538.2965496-CDS-E_fasciculatus_S2_contig8836:472..6931696842538.2965496-CDS-E_fasciculatus_S2_contig8836:472..693Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8836 473..693 -
1696842538.3087678-CDS-E_fasciculatus_S2_contig8836:3047..32201696842538.3087678-CDS-E_fasciculatus_S2_contig8836:3047..3220Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8836 3048..3220 -
1696842538.3220453-CDS-E_fasciculatus_S2_contig8836:3416..34961696842538.3220453-CDS-E_fasciculatus_S2_contig8836:3416..3496Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8836 3417..3496 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8836.16931.1prot_E_fasciculatus_S2_contig8836.16931.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8836 473..3496 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8836.16931.1

>prot_E_fasciculatus_S2_contig8836.16931.1 ID=prot_E_fasciculatus_S2_contig8836.16931.1|Name=mRNA_E_fasciculatus_S2_contig8836.16931.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=158bp
MSRGEGQDGMDYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDEDGK
SFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYAGFKKRGRDEKHPGHY
YHPYFQRDRPEILGGVRRSYPVTSPKWVTQGSSGTPSASSAAGRAATAAR
AAAAARTA
back to top

mRNA from alignment at E_fasciculatus_S2_contig8836:473..3496-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8836.16931.1 ID=mRNA_E_fasciculatus_S2_contig8836.16931.1|Name=mRNA_E_fasciculatus_S2_contig8836.16931.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3024bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8836:473..3496- (Ectocarpus fasciculatus EfasUO2)
ATGTCTCGCGGAGAGGGACAGGACGGGATGGACTATGGCTTCCCGCCGGC
GAGAGGAGGGAGGGGGGCTCCTTCCATGTTGTGAGTGTCGGTGTTGTGGC
GGTGTTGTGGCGACGCCGACGCCGGTCGATGTGCTAATAGCTCTCCTGCT
GCTCCGTCGTCGTGGAGAGATGGACGGAACGATTAGAGAGACTTCTGCCG
TATAACTTTTTCGTCTCTGTCTCTGCCTGGCTCCCGAACGAACGTTCGTT
ACACAAACACACGTATGCTTATGCAGCCCGAGGAAGCTCTACCAGATCCT
GTGCGAGACGGACCCGGAGATTATCTCGTGGGACGAGGACGGCAAGAGCT
TCCACATCGCCAACTACGAGGAATACATCGAGGGAGTCATGCCACTCTTT
TACCGTCACAACAAGCTCACGTCTTTCCAGCGCCAGCTCAACCTGTACGG
TGAGAAGAGACAGAAATCGCGCGTGTGTGTGTTGGCCCAAAATAAAAAAG
AGAGAGCAGAAGCGTTTGGTGCAGAGGCGTGAGCACGTTCCTGTGGCCCC
GACACGCGGCCGGTCCTGCTGGATGGAAAGAGATGAATTCAGAGAGCGAA
GGCAGCAGAGATTGGTTGGATATCCGGTGTGCTGCTGCTGTGTGCCAAGA
GTCCGGGCTGGAAAAAACCGGACGACAGCAAAACGAAGCACGACGCGCCG
CGCGCGCACATCTCGGAAACAATCATAATACCTTGGATCTCGTTTGTTGC
ACGGCTTTTGTTTAGTCACGACAGAGTGCGTGGTGTGTGCCAAAGGAGGG
TCAGGCAGCAGGGACAGAGCCAAACGAGCTTTCAACAAGCTCGTTGGCAC
CACCCTGCATGTTGACCCCTGCTACTTGGCCTCGAGCGTGGCTGCCAGCC
CATGCGTGTTACCAACCACCGCCAAAGCAGCAACAACAAGCAAGCGTTTT
TTTCGTGTCTCATCATCATCCAACCTCGTCTCTACTCTCTTCCATTCTTC
TCTCCTTTGGGTCCGATGTTACGTTCGCAAGATCATTCCGCTTTTTTCTC
TTTTTTTTGGTCGCACACACAAATACAACGACTTCTCGACTCCACCAGTT
CTATGTGCGTGCGTCCCTGTTCGTTTAGCTCCTGCTGCTAGAGTGCACGG
GAGCTCTGACTCTGTCCCTTGCTCTCTCTCGGCCGCTTCAACGACTGCCC
TGTATGGGATAGGCGAAAGTCCTAGAGACGGAGACAAAAAACGCGACCGA
CTGGTAGAATTTAGGCTGCTGTGTGACGGATGGATCTCTTCCTTCCAACG
CCATAAATCACACATCTGGTTGTACTAAAAAAAAGAGAAACCACGGCGGC
TCGCACACGCCAACGATGCTGCTGCTGCTGCTGCTGCTGCTCTCAGCATC
TGGCCGATGGTACGAGAAGCAGCAGCACCCCACAACGATTCCCATGGACT
TGTGCGTGAGCGGACGTATGGATCCAGTTGATGGCATATATCTACCTACA
TGAAGTGCGACAAACCCAACCAACACGCGCGGGCAGGTGGACGCAAGTTT
AGTCCTCTCCCCTCACAAAATCCGAAAATTCAACCGCCTTCTTCTGTCCT
TTGGACCCTTCGGGAACGCGATATTTTTCTCGTGTTTTCTTTTTCGGCTC
GTTCCATGTTGGTCACCAGTACCTATTCTATACTCACCCACCGCCACGCG
TTCGCACCACCAATGTCGTCGACTGATTCACCTCACCATCTCGACAGGCA
GCTCGTCCTGTATGCATGTTGTACACGAGCTTTCCTCGTTCTCTCTCTTT
CTCTGTCTACAGATAGATTTGCATATGCCCCGAACGCAAATGAGCTGATG
CTTGTTGTGCGTGATGTTTTTTACTCGATAAATGTGCCGCATTGTAGTCG
ATGGTAGGTCTTTACATGCGGCTGACCCGCCCGGCGACGGGAGGAGTCCT
GAATAGCTGCTTTTTAACCCAAGGGATCGCCATCGCCAGAGCAAGTATTT
CAGGGGGGGGCAAGAGATGAGGCTTGTTGGGATGTGACGGGTAAACGGCA
AACTCAAGTGTTCATCGCTCCGGGCGCATTCACCTCTCGAAGTATAAGAG
ATCGAAAGGGTCGCGGTGCTGGAGTTCAAGCTCGTTGCGCGCCGCGGCCG
CTTCAACGCTTGGCGCGCTCAGCATGCCGACCACACGCGCACGGATCACG
ATCACCGCAGAGCCACTCCCGCGTCCCTCCCTGTGCCCCTCGCCGCCCCT
TGACTGGCAAGAATTGCGTGGCTCTCTTCCTTTGTTGGTTGACTCGTGGA
CGTATTGTTTGTTTTGCGTCTTCTGTTCTTTGGTTCACAACACGCACAAA
GGCAGTGTTTTTTATCTATTCTTCTCTGTCAAGTTGATTACTTTCTACTT
CCCTATGAAGACGAGCCGGCTTGTTTTCGAACGAGCTTCGCCTCCGGTGG
GTGCCGCCTGGTTGTTGCAGATGGTCATGTGTCAAGGTATGGCTGCATAG
ATTTGTGCGGCGGTGGCGGTGAGCCCACGCGCGAAAGGTTGTAAATTTTA
TGATGAAAATCATGTGCTTGAGTATCGGTGAACTTCAGTCCAACACGACA
GAGGTATGCATACAGCGGCATCAGTTCTTCTCTCCGCGAAGGGATACTAC
GTACCCACCGCAGCTCTTCTCCCCACAGACCTATTTATCCAGGCCCTGAT
TATTTCCCGGCGTCTGACCGCTGTCGCTTCTGCCGTGTGCCTCATTTTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTGTGTTGTC
GAGCAGGCTTCAAGAAGAGGGGTAGGGACGAAAAGCACCCGGGCCACTAC
TACCACCCGTACTTCCAACGAGATCGCCCGGAGATCCTGGGAGGCGTCCG
CCGCTCCTACCCCGTGACGAGCCCCAAGTGGGTTACCCAAGGCAGCAGCG
GCACGCCCAGCGCCAGCAGCGCCGCCGGCAGGGCCGCCACCGCGGCCAGG
GCAGCCGCCGCCGCCAGGACGGCG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8836:473..3496-

>mRNA_E_fasciculatus_S2_contig8836.16931.1 ID=mRNA_E_fasciculatus_S2_contig8836.16931.1|Name=mRNA_E_fasciculatus_S2_contig8836.16931.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=474bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8836:473..3496- (Ectocarpus fasciculatus EfasUO2)
ATGTCTCGCGGAGAGGGACAGGACGGGATGGACTATGGCTTCCCGCCGGC
GAGAGGAGGGAGGGGGGCTCCTTCCATGTTCCCGAGGAAGCTCTACCAGA
TCCTGTGCGAGACGGACCCGGAGATTATCTCGTGGGACGAGGACGGCAAG
AGCTTCCACATCGCCAACTACGAGGAATACATCGAGGGAGTCATGCCACT
CTTTTACCGTCACAACAAGCTCACGTCTTTCCAGCGCCAGCTCAACCTGT
ACGCAGGCTTCAAGAAGAGGGGTAGGGACGAAAAGCACCCGGGCCACTAC
TACCACCCGTACTTCCAACGAGATCGCCCGGAGATCCTGGGAGGCGTCCG
CCGCTCCTACCCCGTGACGAGCCCCAAGTGGGTTACCCAAGGCAGCAGCG
GCACGCCCAGCGCCAGCAGCGCCGCCGGCAGGGCCGCCACCGCGGCCAGG
GCAGCCGCCGCCGCCAGGACGGCG
back to top