mRNA_E_fasciculatus_S2_contig882.16915.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI4_ECTSI) HSP 1 Score: 604 bits (1557), Expect = 2.920e-211 Identity = 333/375 (88.80%), Postives = 337/375 (89.87%), Query Frame = 1
Query: 157 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQ--------RSMEKLMTDIAISSGENDSTAPGTKGAPRPGGAAAXXXXG------GVGRITRVGVPIGSEGLPGTSGDGVEGGAGAGISARPGGADIEAHDV 1239
KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRT+NPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRI+EAKARQE AKQ RSMEKLMTDIAI+SG+NDS APGTKGA GGAA G GVGRITRVGVPIGSEG GAGAG ARP GADIEAHDV
Sbjct: 51 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIKEAKARQEAAKQASLPHPPKRSMEKLMTDIAITSGDNDSAAPGTKGA--AGGAAVAGTGGRTATGAGVGRITRVGVPIGSEGSSXXXXXXXXXGAGAGPPARPVGADIEAHDV 423
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW9_9STRA) HSP 1 Score: 419 bits (1077), Expect = 9.830e-140 Identity = 212/295 (71.86%), Postives = 249/295 (84.41%), Query Frame = 1
Query: 151 KKKPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDD---LEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAISSGE 1026
++KPVVCIV+GMAGSGKTTLLQR+NL + Y+INLDPAV QVPFGA+IDIRDTVNYKEVM+QYGLGPNG I TSLNLFATRFDQV+ L+E RSD L+YVF+DTPGQIEVFTWSASGQIITE+LASAFPT L+YV+DTPRT++PTTFMSNMLYACS+LY++RLP+VLA NKSD+ SP FA EWMSDFEK QEALD + DESYM SLNRSL+LVLDEFY+ L VGVSAA+G+G+ LF++LD A EF RDYLPDLQ R+ AR + AK+R M KLM D+A++ G+
Sbjct: 38 RRKPVVCIVLGMAGSGKTTLLQRINLQMNSSDKQGYYINLDPAVTQVPFGANIDIRDTVNYKEVMAQYGLGPNGGIMTSLNLFATRFDQVIGLMEARSDSAEGLDYVFVDTPGQIEVFTWSASGQIITESLASAFPTCLIYVIDTPRTTSPTTFMSNMLYACSILYRTRLPMVLAFNKSDVTSPDFAAEWMSDFEKFQEALDETADESYMGSLNRSLSLVLDEFYSTLKHVGVSAATGEGIDQLFQSLDAAGDEFIRDYLPDLQARMAAVAARTQAAKEREMTKLMADVAVTRGD 332
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Q0_9STRA) HSP 1 Score: 389 bits (1000), Expect = 1.300e-127 Identity = 198/289 (68.51%), Postives = 235/289 (81.31%), Query Frame = 1
Query: 151 KKKPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDE-SYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAI 1014
+KKP+V + MGMAGSGKTTL+QRLNL +G KSY++NLDPAVK VPF A+IDIRDTVNYKEVM QY LGPNGAI TSLNLFATRFDQVL +LEKR+ DLEYV +DTPGQIEVFTWSASG IITE LAS+FPT LVYVVDTPRTS+PTTFMSNMLYACS+LYK+RLP+VL NK+DILS FA++WM DFEK QE LD G++ YM++L RS++LVLDEFY L VGVSAASGDG+ F+A+D AA EF RDYLPD+ R E+ ++ + + M +LM D+ +
Sbjct: 60 RKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRM 348
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=3 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5H0_BRELC) HSP 1 Score: 373 bits (958), Expect = 7.190e-122 Identity = 186/308 (60.39%), Postives = 243/308 (78.90%), Query Frame = 1
Query: 115 ATPAGEKGEARTKKKPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAISSGENDST 1038
A A E G + KPV +V+GMAGSGKTTL+QRL Y + G+++Y INLDPAV++ + A++DIRDTV+YK+VMS+YGLGPNGAI TSLNLFATRFDQV+DLL KRS +L+Y +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRT+NP TFMSNMLYACS+LYK +LP V+ NK D+L FA+EWM+DFE Q ALD D++YM SL+RSL+LVL+EFYN LT VGVSAA+G+G+P F A+D AA+++E++ LPDL RI+ ++++ ++ S+ +M D+ ISS +++T
Sbjct: 22 ARAAAEPGLPQIYPKPVTILVIGMAGSGKTTLMQRLTAYGVDAGLRNYVINLDPAVRKTGYTANVDIRDTVDYKKVMSEYGLGPNGAIMTSLNLFATRFDQVVDLLAKRSSNLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSIIVYVVDTPRTANPNTFMSNMLYACSILYKLKLPFVVVFNKIDVLRHDFAIEWMTDFEAFQTALDDVQDDNYMGSLSRSLSLVLEEFYNNLTCVGVSAATGEGIPEFFAAVDQAAIQYEKECLPDLLDRIKRQQSKKNAHEEASLSSVMQDMEISSQRDENT 329
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=12 Tax=Phytophthora TaxID=4783 RepID=D0NWP2_PHYIT) HSP 1 Score: 372 bits (955), Expect = 1.960e-121 Identity = 186/306 (60.78%), Postives = 242/306 (79.08%), Query Frame = 1
Query: 157 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAISSGENDSTAPGTKGAPRPGG 1074
KPV +V+GMAGSGKTTL+QRL Y + G+++Y INLDPAV++ + A++DIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DLL KRS DL+Y +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRT++P TFMSNMLYACS+LYK +LP V+ NK D++ FA EWM+DFE Q ALD D+SYM SL+RSL+LVL+EFYN LT+VGVSAA+G+GMP LF A+D AA ++E +YLPDL RI++ + ++ ++ ++ +M D+ IS+ +++ G AP P G
Sbjct: 37 KPVTVLVIGMAGSGKTTLMQRLAAYGVDSGLRNYIINLDPAVRKTGYTANVDIRDTVDYKQVMTEYGLGPNGAIMTSLNLFATRFDQVIDLLGKRSSDLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVMRHDFATEWMTDFEAFQTALDEVQDDSYMGSLSRSLSLVLEEFYNNLTSVGVSAATGEGMPELFAAVDEAAKQYENEYLPDLLERIKQQQKKKHEQEEATLSNVMQDMEISAHRDENLPAGD--APMPNG 340
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A421F4K2_9STRA) HSP 1 Score: 370 bits (950), Expect = 1.310e-120 Identity = 182/301 (60.47%), Postives = 238/301 (79.07%), Query Frame = 1
Query: 115 ATPAGEKGEARTKKKPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAIS 1017
AT A + + KPV +V+GMAGSGKTTL+QRL Y + G+++Y +NLDPAV++ + A++DIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DLL KRS DL+Y +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRT++P TFMSNMLYACS+LYK +LP V+A NK D++ FA EWM+DFE Q ALD D+SYM SL+RSL+LVL+EFYN L++VGVSAA+G+GM F A+D AA ++E +YLPDL RI++ + +Q+ ++ ++ +M D+ IS
Sbjct: 25 ATAAADPSMPKIYPKPVSVLVIGMAGSGKTTLMQRLAAYGVDNGLRNYIVNLDPAVRKTGYTANVDIRDTVDYKQVMTEYGLGPNGAIMTSLNLFATRFDQVIDLLGKRSSDLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVAFNKIDVMRHDFATEWMTDFESFQTALDQVQDDSYMGSLSRSLSLVLEEFYNNLSSVGVSAATGEGMAEFFAAIDEAAKQYEEEYLPDLLERIKQKQKKQDDEQESTLSNVMQDMEIS 325
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5B9_HYAAE) HSP 1 Score: 369 bits (946), Expect = 2.840e-120 Identity = 180/288 (62.50%), Postives = 235/288 (81.60%), Query Frame = 1
Query: 157 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAISS 1020
KPV +++GMAGSGKTTL+QRL +Y + G+++Y INLDPAV++ + A+IDIRDTV+YK+VM +YGLGPNGAI TSLNLFATRFDQV+DLL KRS+ L+Y +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRT++P TFMSNMLYACS+LYK +LP V+ NK D+L FA EWM+DFE Q+ALD D+SYM SL+RSL+LVL+EFYN LT+VGVSAA+G+GMP F A+D AA ++E +YLPDL R+++ + ++ ++ ++ +M D+AI+S
Sbjct: 30 KPVTVLIIGMAGSGKTTLMQRLAVYGMDSGLRNYVINLDPAVRKTGYTANIDIRDTVDYKQVMKEYGLGPNGAIMTSLNLFATRFDQVIDLLAKRSNVLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVLRHDFATEWMTDFEAFQKALDDVQDDSYMGSLSRSLSLVLEEFYNNLTSVGVSAATGEGMPEFFAAVDQAAKQYENEYLPDLLARVKKQQTKKHEQEEAALSNVMQDMAITS 317
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLJ6_9STRA) HSP 1 Score: 369 bits (946), Expect = 4.430e-120 Identity = 186/303 (61.39%), Postives = 235/303 (77.56%), Query Frame = 1
Query: 157 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAISSGENDSTAPGTKGAPR 1065
KPV +V+GMAGSGKTTL+QR+ Y E G+++Y +NLDPAV++ + A+IDIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DL+ KRSD ++Y +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRT++P TFMSNMLYACS+LYK RLP V+A NK D+L FA EWM+DFE Q ALD + DESYM SL+RSL+LVL+EFYN L +VGVSAA+G+GM LF A+D AA ++E +YLPDL R++E R+ + + K+M D+ IS+ P PR
Sbjct: 40 KPVTVMVIGMAGSGKTTLMQRIATYGLETGMRNYIVNLDPAVRKTGYTANIDIRDTVDYKQVMTEYGLGPNGAIMTSLNLFATRFDQVIDLIAKRSDSIDYAVVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLRLPFVVAFNKIDVLRHDFAQEWMTDFEAFQAALDQAQDESYMGSLSRSLSLVLEEFYNNLRSVGVSAATGEGMAELFAAVDAAAQQYEAEYLPDLLARVREQHTRKAQQQDADLTKVMQDMDISAAMGGHAKPTVPSGPR 342
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNA5_GLOUD) HSP 1 Score: 369 bits (946), Expect = 6.010e-120 Identity = 186/307 (60.59%), Postives = 241/307 (78.50%), Query Frame = 1
Query: 157 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAISSGENDSTAPGTKGAPRPGGA 1077
KPV +V+GMAGSGKTTL+QR+ Y E G+++Y +NLDPAV++ + A+IDIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DL+ KRS DL+Y +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRT++P TFMSNMLYACS+LYK RLP V+A NK D+L FA EWM+DFE Q ALD D+SYM +L+RSL+LVL+EFYN L++VGVSAA+G+GM F A+D+AA +E++YLPDL RI+E +A++E + ++ ++M D+ IS+ AP+ G A
Sbjct: 39 KPVTMLVIGMAGSGKTTLMQRIATYGLENGMRNYIVNLDPAVRKTGYTANIDIRDTVDYKQVMTEYGLGPNGAIMTSLNLFATRFDQVIDLIGKRSKDLDYAVVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLRLPFVIAFNKIDVLRHDFAQEWMTDFEAFQTALDQVQDDSYMGNLSRSLSLVLEEFYNNLSSVGVSAATGEGMDKFFLAIDDAAKRYEQEYLPDLIERIREQQAQREEQQDTNLTRVMQDMDISAAMGVDDGGSAAAAPKTGAA 345
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATF5_PLAHL) HSP 1 Score: 367 bits (942), Expect = 1.710e-119 Identity = 180/293 (61.43%), Postives = 235/293 (80.20%), Query Frame = 1
Query: 157 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTSNPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIQEAKARQETAKQRSMEKLMTDIAISSGENDS 1035
KPV +V+GMAGSGKTTL+QRL Y + G+++Y INLDPAV++ + A++DIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DL+ KRS DL+Y +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRT++P TFMSNMLYACS+LYK +LP V+ NK D++ FA+EWM+DFE Q ALD D+SYM +L+RSL+LVL+EFYN LT+VGVSAA+G+GMP F A+D AA ++E +YLPDL RI++ + ++ + S+ +M D+ IS+ + S
Sbjct: 35 KPVTILVIGMAGSGKTTLMQRLAAYGVDSGLRNYVINLDPAVRKTGYTANVDIRDTVDYKKVMTEYGLGPNGAIMTSLNLFATRFDQVIDLVGKRSSDLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVMRHDFAVEWMTDFEAFQTALDEVQDDSYMGNLSRSLSLVLEEFYNNLTSVGVSAATGEGMPEFFAAIDEAAKQYENEYLPDLLGRIKQQQKTKQVRAEASLSSVMQDMEISARDKTS 327 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig882.16915.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig882.16915.1 >prot_E_fasciculatus_S2_contig882.16915.1 ID=prot_E_fasciculatus_S2_contig882.16915.1|Name=mRNA_E_fasciculatus_S2_contig882.16915.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=414bp MEFLQKMEEEARRGGDDGASPAASSDPTGEGGGGSSSSATPAGEKGEARTback to top mRNA from alignment at E_fasciculatus_S2_contig882:7347..13367- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig882.16915.1 ID=mRNA_E_fasciculatus_S2_contig882.16915.1|Name=mRNA_E_fasciculatus_S2_contig882.16915.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6021bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig882:7347..13367- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig882:7347..13367- >mRNA_E_fasciculatus_S2_contig882.16915.1 ID=mRNA_E_fasciculatus_S2_contig882.16915.1|Name=mRNA_E_fasciculatus_S2_contig882.16915.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1242bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig882:7347..13367- (Ectocarpus fasciculatus EfasUO2)back to top |