prot_E_fasciculatus_S2_contig875.16849.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig875.16849.1
Unique Nameprot_E_fasciculatus_S2_contig875.16849.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length458
Homology
BLAST of mRNA_E_fasciculatus_S2_contig875.16849.1 vs. uniprot
Match: D7G4J1_ECTSI (Smr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4J1_ECTSI)

HSP 1 Score: 513 bits (1320), Expect = 1.530e-179
Identity = 256/299 (85.62%), Postives = 272/299 (90.97%), Query Frame = 0
Query:  158 MSREGEWESALEKLQCIRDKGLKPSMSTHMDVISVCRRALEWDQASKAFRAMIEAHLTDQPFEDMACQDYEDESNHVFARACGIVAGMQAGAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKTKLNLFSFDLLIATVAEQGYKEVSTMLYELGVVEADRALLETDGCGDGQG----EWPKWPLTVGRKGGAILELHDLTQSIALETVQVALLDVVRRPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKPAVVDLLENLGLKPEFQQHNEGCVELKPASLEAYIRRMKRPGAAA 452
            MSREG+WE ALE LQ IRDKG+KPSMSTHMDVISVCRRALEWDQASKA+R MIEAHLTD PF+DMACQDYEDESNHVFARACGIVAGMQA AGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSK KLNLFSFDLLI TVA+QGYKEVSTMLYELGVV+ADRALLET+G          EWPKWPL VGR GGAILELHDLTQ IALETVQVALLDV+RRPLRRPYWSGDKRWRI+TGMGNNSKD+EA+IKPAVV+LLE+LGL+PEFQQ NEGCVELKPA+LEAYIRR     +AA
Sbjct:    1 MSREGDWEGALEMLQRIRDKGMKPSMSTHMDVISVCRRALEWDQASKAYREMIEAHLTDHPFDDMACQDYEDESNHVFARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEGNXXXXXXXXVEWPKWPLKVGRTGGAILELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRIITGMGNNSKDREAIIKPAVVELLEDLGLRPEFQQRNEGCVELKPANLEAYIRRQVTKASAA 299          
BLAST of mRNA_E_fasciculatus_S2_contig875.16849.1 vs. uniprot
Match: D7G4I1_ECTSI (Predicted mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I1_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.470e-38
Identity = 93/283 (32.86%), Postives = 152/283 (53.71%), Query Frame = 0
Query:  162 GEWESALEKLQCIRDKGLKPSMSTHMDVISVCRRALEWDQASKAFRAMIEAHLTDQPFEDMACQDYEDESNHVFARACGIVAGMQAGAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKTKLNLFSFDLLIATVAEQGYKEVSTMLYELGVVEADRALLETDGCGDGQGEWPKWPLTVGRKGGAILELHDLTQSIALETVQVALLDVVRRPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKPAVVDLLENLGLKPEFQQHNEGCVELKPASLEAYIRR 444
            G+WE +++ ++ +RD    PS++ ++  I  CR+A E+D AS     M +  L +   +  A   + +       +    +A M     I+P   TYRA++ L   E  W+ ++LL+EH +R+      F +D + + + + G+ E++TM++E             D  GD   E   +           L+LH+ T S AL  V+V LLD+ R+P  R +    +   I+TGMGNNSKD EAVIKP V++LL ++GL+P   ++NEGC+ L+PA L+AY+ R
Sbjct:  167 GDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGEYDHASTLLSDMNKVCLPEDLIKAYAAP-HPNAPGVTQTQKVFCLAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFE-------------DALGDKIEELNSFAPPE-------LDLHNHTVSTALAAVRVVLLDMARKPATRTFHDPAQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLQAYMAR 428          
BLAST of mRNA_E_fasciculatus_S2_contig875.16849.1 vs. uniprot
Match: A0A835YUL6_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUL6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.920e-25
Identity = 93/337 (27.60%), Postives = 157/337 (46.59%), Query Frame = 0
Query:  139 PSVSRVDPAAAEEEAAIKRMSREGEWESALEKLQCIRDKGLKPSMSTHMDVISVCRRALEWDQASKAFRAMIEAHLTDQPFEDMACQDYEDESNH----VFA-----------RACGIVAGMQAGAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKTKLNLFSFDLLIATVAEQGYKEVSTMLYELGVVEADRALLETDGCGDGQGEWPKWPLTVGRKGGAILELHDLTQSIALETVQVALLDVVRRPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKPAVVDLLE-NLGLKPEF----------------QQHNEGCVELKPASLEAYIR 443
            P  +   P  A+   AIK+ +  GEW  A+  +  +R+  L PS+  + D I+  RR LE+D+A      M +A +    F   A  D  D S+     VFA               ++  M+    ++P+  TYRA++ +C  +  W  ++LLLEH R    +   F ++ +   +  +G  +++ ++YE       R+L        G+G +  W     +     ++LH  T + A   V+ AL D++R+P  RP+        I+TG+G  S++  AVIKPA++D+L   L +  E                 Q+HN GCVE++P  L+A+ R
Sbjct:   13 PPGAEAAPETAKYNDAIKKYASGGEWAKAVVLIDKMREINLSPSIEAYGDTITALRRGLEFDRADALLADMYDACMPADLFAKYAAADPSDASSTQTQCVFALENXXXXXXXXXXXXLLLCMRTDQ-LEPDVDTYRAVMGMCTKDRLWHLSLLLLEHMRLRGVQPGKFIYNEICTVLDMEGKHDLAEIVYE-------RSL--------GEGVFEPWIEDDNK-----VDLHSFTLNTARAAVRSALTDMLRQPSGRPFHDPAAPMHIITGVGRRSEEGVAVIKPAILDMLNVELQIPAEXXXXXXXXXXXXXXXXVQKHNPGCVEIQPQHLQAWAR 328          
BLAST of mRNA_E_fasciculatus_S2_contig875.16849.1 vs. uniprot
Match: A0A812I2Z0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812I2Z0_9DINO)

HSP 1 Score: 59.3 bits (142), Expect = 9.250e-6
Identity = 62/216 (28.70%), Postives = 99/216 (45.83%), Query Frame = 0
Query:  255 NGTYRALLQLCKDEGSWEAAILLLEHSRRSKTKLNLFSFDLLIATVAEQGYKEVSTMLYELGVVEADRALLETDGCGDGQG----------------EWPKWPLTVG-RKGGA----------ILELHDLTQSIALETVQVALLDVVR-RPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKPAVVDLLENLGLKPEFQQHNEGCVELKPASLEAYI 442
            +GT+ AL ++ +   SW++ + +LE +  +  +L+  +  ++++  A Q   +   +L  LG++EA   +L+      G                  E P   L +G RK GA           L+LH L    A   V  ALLD    +P   P W       +VTG GN+S+  E+V++PAV+ LL+ LGL      +NEG V L    L  +I
Sbjct:  322 DGTFNALCRVFEHNSSWQSCLQILEEASLAGPQLSQLTLSVVVS--ACQKSTKWHQVLQLLGMMEASGMVLDDVFQAAGMTSHVYMGDLATALAWYRERPLRGLRLGGRKAGAGWFEHGRRWGHLDLHGLQPEEARLAVCCALLDATMVKPGMLPSWG----LVLVTGRGNHSEG-ESVVRPAVLQLLKELGLAARVDPYNEGRVVLPARELLTFI 530          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig875.16849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G4J1_ECTSI1.530e-17985.62Smr domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G4I1_ECTSI3.470e-3832.86Predicted mitochondrial protein n=2 Tax=Ectocarpus... [more]
A0A835YUL6_9STRA1.920e-2527.60Smr domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A812I2Z0_9DINO9.250e-628.70Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableGENE3D3.30.1370.110coord: 344..434
e-value: 6.0E-10
score: 40.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 140..315
e-value: 1.8E-15
score: 58.8
IPR002625Smr domainPROSITEPS50828SMRcoord: 352..436
score: 12.543
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 351..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig875contigE_fasciculatus_S2_contig875:3534..10158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig875.16849.1mRNA_E_fasciculatus_S2_contig875.16849.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig875 1859..10158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig875.16849.1 ID=prot_E_fasciculatus_S2_contig875.16849.1|Name=mRNA_E_fasciculatus_S2_contig875.16849.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=458bp
MQLLLRRLALGVNSRKTLACVPTPPAPAASGSGSGGTRRAFTRFSARSAA
VPAAAPPAPRHQQQQRQQQQQHQRQELQRQSRTLASSGRQTQAPRAVPKD
VLRRRRSTASEATAAAAEAAERQGGSPAKAAGGASPPFPSVSRVDPAAAE
EEAAIKRMSREGEWESALEKLQCIRDKGLKPSMSTHMDVISVCRRALEWD
QASKAFRAMIEAHLTDQPFEDMACQDYEDESNHVFARACGIVAGMQAGAG
IKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKTKLNLFSFDLLIATV
AEQGYKEVSTMLYELGVVEADRALLETDGCGDGQGEWPKWPLTVGRKGGA
ILELHDLTQSIALETVQVALLDVVRRPLRRPYWSGDKRWRIVTGMGNNSK
DKEAVIKPAVVDLLENLGLKPEFQQHNEGCVELKPASLEAYIRRMKRPGA
AAAATPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036063Smr_dom_sf
IPR002625Smr_dom
IPR011990TPR-like_helical_dom_sf