|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: MABP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD9_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 2.580e-146 Identity = 278/337 (82.49%), Postives = 284/337 (84.27%), Query Frame = 1
Query: 466 PMAVGGNIVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQVRGRGGRGCGGLDAHAAEPAPKAAEAEDADGSNNDKAAVVVPTGNGSPPRTLRRLGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAGDGRPPSLNVLGGADVLSQTFSEPPSPTNEHDEDADVLDASGLGGDGWETRRACHSRRNTFGQGLGDLGGXXXXXXXXXXXGMLGEEDIFADE 1476
P+A GNIVDVIVVHGSDPV PGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQA GDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV RGGRGCGGLDA AEPA K AEA+D DG NDK+AVVVP GSPPRTLRRLGRE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DGRPPSL VLGG+ +S+TFSEPPSPTNEHDEDADVLDASGLG DGWETRRACHSRR TFGQGLGDLG GML EEDIFADE
Sbjct: 267 PVAGRGNIVDVIVVHGSDPVLPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAGGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQVCRRGGRGCGGLDARTAEPAAKPAEADDGDG--NDKSAVVVPAVLGSPPRTLRRLGREVSPAVAAGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------DGRPPSLEVLGGSGGVSETFSEPPSPTNEHDEDADVLDASGLGDDGWETRRACHSRRTTFGQGLGDLGAGGGGDGGM---GMLSEEDIFADE 589
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: MABP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS2_9PHAE) HSP 1 Score: 170 bits (431), Expect = 6.700e-45 Identity = 104/189 (55.03%), Postives = 109/189 (57.67%), Query Frame = 1
Query: 55 DVSPVPNGGGAGEEEGASFFPGWSVPASSTFSGTGPAGGGAASRNVVDLGSIGGDMGHRALPLAG-DGGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWTSTATGGAPMAVGGNIVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAV 618
D SPVPNGG GE+EGASFFPGWSVP SSTFSG GP VVDLGSIGGDMGHRALPL G GG+RGS P + AT P+A GNIVDVIVVHGSDPVPPGYSKLERSSGG+RADLNTGARGQYVYLAV
Sbjct: 190 DYSPVPNGGVGGEKEGASFFPGWSVPTSSTFSGAGPG-------KVVDLGSIGGDMGHRALPLTGGSGGTRGSGGVGLRARASTETTSLPDSDRKRSFSLTGRGE-----------------------PEAAAATSAPPVAGRGNIVDVIVVHGSDPVPPGYSKLERSSGGRRADLNTGARGQYVYLAV 348
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: Brefeldin (a-inhibited guanine nucleotide-exchange n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C9_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.640e-30 Identity = 73/142 (51.41%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 448 TATGGAPMAVGGNIVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV 873
+A+ GAP+ V++ V GSD VP G+ ++ + G++ADLN GA G Y+YLAV++D +PG R P VVALA+IFPDR E VPP F VRR+G PVD NAGT+GER +LCYKRG NPITDIQV
Sbjct: 204 SASPGAPL------VEIQAVFGSDAVPEGFKRVSNTPCGRKADLNAGAGGHYIYLAVRKD-------------NPGRRR----PPVVALAVIFPDRQEFVPPTFSVVRRQGEPVDFNAGTHGERVYLCYKRGAGNPITDIQV 322
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI0_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.070e-25 Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 487 IVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV 873
IV + +VHG+DPVP GY K+ + G++ADLN GA GQY+YL V+RD S P + +A++FPDRGE++PP + RR+ PVDLN GTNGER +LC ++G NPI+DI +
Sbjct: 464 IVAITLVHGNDPVPEGYDKVGLTIAGRKADLNAGAGGQYLYLCVQRDR-----------SWPRT-------CITGIAVVFPDRGESIPPGYSITRRKSKPVDLNNGTNGERVYLCARQGIGNPISDIVI 574
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: MABP (domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FN15_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.650e-23 Identity = 54/129 (41.86%), Postives = 73/129 (56.59%), Query Frame = 1
Query: 487 IVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV 873
I D+ V+ D VP G++KLERS G+RADLN G RG +VYL +D + G + + IFP+RGE VP ++ VRRRG P ++N GT GE +LC+KR TT+ I D+ V
Sbjct: 14 ITDLTVIFRGDSVPDGFTKLERSQSGQRADLNKGGRGTFVYLCHSKD------------------QSSGKAPISEIIAIFPERGEFVPSDYEVVRRRGVPANINTGTQGEIIYLCFKRSTTSEIIDLVV 124
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: MABP (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY6_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.450e-23 Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 487 IVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV 873
I D+ V+ D +P G++KLERSS G RADLN G RG ++YL +RD + G + + +IFP+RGE VP ++ V+RRG P +LN GT GE+ +LCYKR T+ I D+ V
Sbjct: 192 ITDLAVIFTGDTLPDGFTKLERSSSGLRADLNKGGRGVFMYLCQRRD------------------QFAGKLPISEIIVIFPERGEFVPTDYEVVQRRGAPANLNTGTQGEKVYLCYKRSVTSSIVDVMV 302
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: MABP (domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YQE4_PHYSP) HSP 1 Score: 107 bits (267), Expect = 8.910e-23 Identity = 54/129 (41.86%), Postives = 73/129 (56.59%), Query Frame = 1
Query: 487 IVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV 873
I D+ V+ D VP G++KLERS G+RADLN G RG +VYL +D + G + + IFP+RGE VP ++ VRRRG P ++N GT GE+ FLC+KR T+ I D+ V
Sbjct: 131 ITDLTVIFRGDSVPDGFTKLERSQSGQRADLNKGGRGTFVYLCHCKD------------------QSSGKAPISEIIAIFPERGEFVPSDYEVVRRRGVPANINTGTQGEKIFLCFKRSATSAIVDLVV 241
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: MABP (domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJU7_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.540e-22 Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 1
Query: 487 IVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV 873
I D+ V+ D VP G++KLERS G+RADLN G RG ++YL +D + G + + IFP+RGE VP ++ VRRRG P ++N GT GE+ +LC+KR T + I DI V
Sbjct: 159 ITDITVIFRGDSVPEGFTKLERSPSGQRADLNKGGRGSFIYLCHSKD------------------QSSGKAPISEIIAIFPERGEFVPSDYEVVRRRGAPANINTGTQGEKIYLCFKRSTISAIVDIVV 269
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: MABP (domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MX14_PHYIT) HSP 1 Score: 106 bits (264), Expect = 1.650e-22 Identity = 53/131 (40.46%), Postives = 73/131 (55.73%), Query Frame = 1
Query: 481 GNIVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV 873
G I D+ V D VP G++KLERS G+RADLN G RG +YL +D + G + + IFP+RGE VP ++ VRRRG P ++N GT GE+ +LC+KR +T+ I D+ V
Sbjct: 114 GPITDITVNFRGDSVPEGFTKLERSPSGQRADLNKGGRGSAIYLCQSKD------------------QSSGKAPISEIIAIFPERGEFVPTNYEVVRRRGVPANINTGTQGEKIYLCFKRSSTSAIVDLAV 226
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3P6_PYTOL) HSP 1 Score: 110 bits (275), Expect = 8.000e-22 Identity = 56/129 (43.41%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 487 IVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQYVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVPPMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQV 873
I D+ ++ D VP G++K+ERS G+RADLN G G +VYL V RDT D P + +A IFPDRGE +P ++ ++RRG P +LN GT GE+ FLCYKR + I DI V
Sbjct: 158 ITDIAIMFTGDGVPDGFTKIERSPSGQRADLNKGGGGVFVYLCVSRDTT--------DNKVP----------ISEIAAIFPDRGEFIPTDYEVIQRRGVPANLNTGTQGEKIFLCYKRSANSSIQDIAV 268
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8730.16835.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
| Match Name | E-value | Identity | Description | |
|---|
| MABP | 2.580e-146 | 82.49 | domain-containing protein n=1 Tax=Ectocarpus silic... | [more] |
| MABP | 6.700e-45 | 55.03 | domain-containing protein n=1 Tax=Ectocarpus sp. C... | [more] |
| Brefeldin | 1.640e-30 | 51.41 | a-inhibited guanine nucleotide-exchange n=3 Tax=Mo... | [more] |
| Uncharacterized | 2.070e-25 | 45.74 | protein n=1 Tax=Tribonema minus TaxID=303371 RepID... | [more] |
| MABP | 1.650e-23 | 41.86 | domain-containing protein n=1 Tax=Phytophthora rub... | [more] |
| MABP | 2.450e-23 | 41.86 | domain-containing protein n=1 Tax=Pythium brassicu... | [more] |
| MABP | 8.910e-23 | 41.86 | domain-containing protein n=1 Tax=Phytophthora soj... | [more] |
| MABP | 1.540e-22 | 41.09 | domain-containing protein (Fragment) n=1 Tax=Phyto... | [more] |
| MABP | 1.650e-22 | 40.46 | domain-containing protein n=1 Tax=Phytophthora inf... | [more] |
| Uncharacterized | 8.000e-22 | 43.41 | protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 112.1 |
| Seed ortholog evalue | 7.5e-22 |
| Seed eggNOG ortholog | 157072.XP_008867825.1 |
| Preferred name | FGD5 |
| Model size | 1476 |
| KEGG ko | ko:K05724,ko:K12494,ko:K17362,ko:K18442,ko:K20163 |
| KEGG Pathway | ko04144,map04144 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000139,GO:0001558,GO:0001726,GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005794,GO:0005933,GO:0005934,GO:0005935,GO:0005938,GO:0006810,GO:0006886,GO:0006887,GO:0006950,GO:0006996,GO:0007010,GO:0007163,GO:0008104,GO:0008150,GO:0008289,GO:0008360,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010511,GO:0010513,GO:0010562,GO:0010646,GO:0010647,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0019216,GO:0019220,GO:0019222,GO:0019899,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030010,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030427,GO:0031090,GO:0031252,GO:0031267,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0032012,GO:0032014,GO:0032153,GO:0032940,GO:0033036,GO:0033554,GO:0034613,GO:0034976,GO:0035091,GO:0040008,GO:0042886,GO:0042995,GO:0043087,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045184,GO:0045834,GO:0045937,GO:0046578,GO:0046579,GO:0046847,GO:0046889,GO:0046890,GO:0046903,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051056,GO:0051057,GO:0051128,GO:0051174,GO:0051179,GO:0051234,GO:0051285,GO:0051286,GO:0051336,GO:0051523,GO:0051641,GO:0051649,GO:0051666,GO:0051716,GO:0061171,GO:0061389,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0071071,GO:0071073,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0098588,GO:0098772,GO:0098791,GO:0099568,GO:0099738,GO:0120025,GO:0120031,GO:0120036,GO:1901981,GO:1902531,GO:1902533,GO:1903725,GO:1903727 |
| Exons | 6 |
| EggNOG free text desc. | regulation of ARF protein signal transduction |
| EggNOG OGs | COG5307@1,KOG0929@2759,KOG1729@1,KOG1729@2759,KOG2127@1,KOG2127@2759 |
| Cds size | 1476 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01004,ko04131 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842529.514027-CDS-E_fasciculatus_S2_contig8730:17..263 | 1696842529.514027-CDS-E_fasciculatus_S2_contig8730:17..263 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8730 18..263 - |
| 1696842529.5283968-CDS-E_fasciculatus_S2_contig8730:1098..1409 | 1696842529.5283968-CDS-E_fasciculatus_S2_contig8730:1098..1409 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8730 1099..1409 - |
| 1696842529.5386877-CDS-E_fasciculatus_S2_contig8730:1455..1504 | 1696842529.5386877-CDS-E_fasciculatus_S2_contig8730:1455..1504 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8730 1456..1504 - |
| 1696842529.5487876-CDS-E_fasciculatus_S2_contig8730:3889..3994 | 1696842529.5487876-CDS-E_fasciculatus_S2_contig8730:3889..3994 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8730 3890..3994 - |
| 1696842529.5603251-CDS-E_fasciculatus_S2_contig8730:4283..4433 | 1696842529.5603251-CDS-E_fasciculatus_S2_contig8730:4283..4433 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8730 4284..4433 - |
| 1696842529.5724092-CDS-E_fasciculatus_S2_contig8730:5398..6013 | 1696842529.5724092-CDS-E_fasciculatus_S2_contig8730:5398..6013 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8730 5399..6013 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8730.16835.1 >prot_E_fasciculatus_S2_contig8730.16835.1 ID=prot_E_fasciculatus_S2_contig8730.16835.1|Name=mRNA_E_fasciculatus_S2_contig8730.16835.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=492bp
SSGARGGGGGGGGLGANADVSPVPNGGGAGEEEGASFFPGWSVPASSTFS
GTGPAGGGAASRNVVDLGSIGGDMGHRALPLAGDGGSRGSGGGGGGGGGG
VGQRARATTETTSLPDSGRKRSFSLSARGEPEAAAAAAAAAAAGAPWTST
ATGGAPMAVGGNIVDVIVVHGSDPVPPGYSKLERSSGGKRADLNTGARGQ
YVYLAVKRDTPLVDQAEGDDVSHPGGGRMVGVPAVVALALIFPDRGETVP
PMFQKVRRRGTPVDLNAGTNGERSFLCYKRGTTNPITDIQVRGRGGRGCG
GLDAHAAEPAPKAAEAEDADGSNNDKAAVVVPTGNGSPPRTLRRLGREAS
SSAAAAAAGAAAGTGTAENGGGSGGGVVEEAVTPPRAGGGGGGGGRGEAG
DGRPPSLNVLGGADVLSQTFSEPPSPTNEHDEDADVLDASGLGGDGWETR
RACHSRRNTFGQGLGDLGGGGGGGGGDGGMGMLGEEDIFADE back to topmRNA from alignment at E_fasciculatus_S2_contig8730:18..6013- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8730.16835.1 ID=mRNA_E_fasciculatus_S2_contig8730.16835.1|Name=mRNA_E_fasciculatus_S2_contig8730.16835.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5996bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8730:18..6013- (Ectocarpus fasciculatus EfasUO2)
TCCAGCGGCGCCCGCGGCGGGGGCGGCGGGGGCGGCGGCCTGGGTGCCAA
CGCCGATGTTTCTCCGGTGCCCAACGGCGGCGGTGCCGGCGAAGAAGAAG
GCGCTTCTTTCTTCCCGGGTTGGTCGGTCCCGGCCAGCTCCACCTTCTCC
GGCACCGGGCCCGCGGGGGGAGGCGCGGCCAGCAGGAACGTGGTGGACTT
GGGAAGCATTGGCGGCGACATGGGGCACCGTGCGTTGCCGCTGGCGGGAG
ATGGGGGGTCGAGGGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GTCGGGCAGCGCGCCCGAGCCACAACGGAGACGACGTCGCTGCCGGACAG
CGGTAGGAAGCGGTCGTTCAGCCTGTCGGCGAGGGGGGAGCCGGAGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGCGCCGTGGACTTCGACT
GCGACTGGGGGGGCACCGATGGCGGTGGGAGGTAACATCGTGGACGTAAT
CGTGGTGCACGGGTCGGACCCCGTTCCTCCCGGGTACTCGAAGCTGGAGC
GATCGTCGGGGGGGAAGCGAGCGGACCTGAACACGGGGGCACGGGGGCAG
TACGTCTATCTCGCGGTGAGCAGTACTACACCACAGGACGATATGTAGCG
GAATATCACCGTAGGTGACACAAGATACCACACCCCCTGGACCATTTTCA
AAGCTCTTATCGATTACATTACTCCACGACGAAGAGGATGCCAAGTCAAA
TGAAACGATACGTTTTCGGGAAGACCTCGACGAGACGCCACCAATTGCGA
CGCTGCCACTCTTTTTGCTGTGGAGGAATCGAGCTTTGAAAGTCGCTCCG
GGGGGTGTGGTGTTTTGCGTCACCACCGGTATTTAATGGCGCATTGGAAT
GTCGGTAGACAACGCGTGTGTGGCCTATCGATAGGTACCGCCGTTGTTTG
AAAAGGCTATTTATGTCCGGTCGATACCTTTGGTTTTTTTCGATGGGTTT
GGGGATGCCAATAGAATGTCATACAGAACGCGCTACCACTTAAGAACCCA
GGAGCTAAGAAATTGAGCCTATAAAAAATCAAAATTTAAGAACTTGAGCA
CCGCTTCCGAGCCAGGTTAAGAACCCCCACTCTAAAACCTATATAGTGCC
CATTGAAGCATATCCTTAGGAACTAAGAATAAGAACTCCAGCCTCGGCCG
AAATAAACGGTTCTTAAGTTCTTAAGTAGTGGCGCGTTCTGTACGGTGGT
TGTTCCATTAAAATACTTGGAGATCGATTGATCGATTGATCGATAGCTAT
TGCATCGATCAATAGGCTGAAGGTAGTTTTGTCGAACGGACCTGAACGCA
GACAGGACGTCTATCTCGCGTATGAATTGCTTGTGTGTGTGCCGCTTCGC
CTCTCGTTGTTGCGGTTCAACTTCAACTAAAGAATGTCCAATTCCACCCC
GCTTGCTGAAGCATCAACAACATCAGATGTACCGCCCACGTTTTCCCCTA
GCACGCCCGGCCTTCAGGCAGGGTGTACCGCCCCCTCGCTTTAACCGCCG
ACTCCCCAACCTCTCCTGATGGACGCTTAGGTAAAGCGAGATACGCCTCT
TGTGGACCAGGCGGAAGGGGATGACGTGTCTCATCCGGGGGGGGGTAGGA
TGGTGGGCGTCCCCGCTGTGGTTGCGCTGGCACTGATTTTTCCCGACCGA
GGGGAGACTGTTCCCCCCATGTTCCAGAAGGTATGTACGCCGTGGTGTCC
GCTTTGATTGGAGTGGTGGTGGATGATGGTCGTTGTTGTTGTTGTTGTTG
TTGTTGTTGGTGGTGGTGGTGGTGGTGGTGGTGCTGCTGCTGCTACTGCT
GTTGCTACTGTTGCTTGCCGTCGCGGTTGTTTGTTGTTTGCCAAGTACCG
TCATGCCGTGGGCATGTTGGCCTCCTGAACATCAGCTACACGCCGTTGTG
TGGGATGAAATGTAACAAGAATGCGGATGTGCACTTCGTTTTTTTTGTTT
TTGCCTCTTGTCTCGAAAGGTACGACGGCGAGGCACGCCGGTCGACCTTA
ACGCGGGGACGAATGGAGAAAGATCATTTCTCTGCTACAAGAGGGGCACC
ACCAACCCCATCACCGATATACAGGTACTGTAACGACTGTTGCTGTTGGC
GGTTGTGGTTTTGTTGCTGCGCCCGAGATTTGTGGAAAATTGTCAATCGA
TATGCGCCGTCCCCTCTCTCTGACTCTACCTCTGTCTGCCTGTCTGTCTG
TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC
TGTCTGTCTGTCTCTGTCTCTGTCTATTGTGTGTATCTCACTGTGTGTAT
CTCTCATTCTCTCCCTCTCTCTCATTCTCCACGTCTTTCTCGTTCTCTCT
CTCTTTCTCTCTCTCTCTCTGTCCCTCCTCCTCCTCTTGTGTATCGCTCT
CCCAACTCCCTCTCCCGTCCCCCCGCCGCCCACCGGTGTGTGTGTGTGTG
TGTGTTTGTGTGTGTGCCTCCCACCCGCGCCGCGCCGCGTGTTCCGAGAG
ATCAGATCTACTTCCCCCGAAAACGAGAATTCCCACCCCACGCCTACAAC
CGCCTGGAGACCACCCCCTCCGGCCACGCCGCGGACCTCAACTCCGGCTC
GGGCGGAGCACCCATCTTCTTGGCCTACAAGCAGGAGCTTGTGCGGCTCC
GCGGGTTGCGCTCGGGCCTTTCGTACAGCTCGGGCGGGGGGGTGGCGGCG
ACGGCGACGGCGTCGGGGGGGGAGGGGGAGAGGGGGGTGAAGGAGGGGGG
TGACGCTAATGGCGACTCTGCGGGTCCTCTCTCGGCGGCGGAGTCGAGGA
CGACCAATTCTTCGACCGGTTTTCTGGCGGCAGGCAAGCGTTGTATGTAT
CGTGAGGCTTCGGCATGTAGAACAAGTAAGGGGTCGGTCGGTCGGTCGTT
TGTGTGTGTGTGTGTTTGTGCGTGTGTCTTTATTGTTAGTATCTCTCGAC
CAGGCGACCGATGAAATGAGCGTCAGTGTCAATTGTGGCTGATGTTGTCG
AGTGGCTCTTCTTCTCTGTGGCAACACCCTGGAGGTAGATCTCCGACAGT
TCGTCTGACGTCACAATCTACGAGACAGTCTTGAGGTGGCATTCCCCAGC
AGTGCCCTGTCTTGTCTTTGTTGATGGCATTGGTCATCGATCGTGCTAAC
CGGCTGACGAATGAAAAACGTCAGTCTCAAGTTTAGATGGAAAACAGCAG
AAAGCGATTCTGAAGGCCATGACTTGGGACCACGTGAGGGGGATACCTGG
AGAGGCTAGGGTATTCTCCGGATTAAAAAACAGAATTGGTAGAATAGCAG
ACGAAGAGAATGCACCTGCTGTGTGTGTGTTGTCTTCCACATTTACCCCG
TTCCGTCCTCCGCTCAGTTCCGACGAGGTTGGTTGTGGTGGAGAGTAATC
GTATGCTACAGCAATTGACATCTTCGTGACTGCTGGCTGTTGTATTTGTC
TCTTTGTCTTGACAATATTTGTGACTGTGTCGTTGTTGATGTATTTTAGC
ATATCTCGTTGGCATGAAGACGGCTCACAACAAGCCAATACCTTTTGTCT
CCACAGCGTCCGACCGCTGCCGCCCTCCTGTGCACCTCTCCCACTACCAC
CACTACCACCACCACCACCACCATGTAACAGGCATCGACGCCCTTGCCGA
CGAAGGCGACGGCAGCCGCCACGTGTCACCGCCACCGCCGCCGCCGCTGT
CCCCACCACCGCCGCCAAAACGAGAGCGAAAAGAGGGAGAAGGAGCAGTT
GCAAGGGGCGCTGACGAGGGCGCTGATGCAGCGGGGGCCACGGAAACGGT
CGATGAAAATGGACCACCTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTG
CTTCTCCCGATGATGCTGCCGCTGCGGCCGGCAGACACGCGAGGCGTGAG
ATTCACAGGTGATCGTTAAGCGGGAGTGGAAGGTGGAGGGGGGACTTGTG
TGCTTTTCATCGAGCGGGATTTCCAAGCGGGCGGTGGGGGGGGGCGTATG
GACGACATGGAGGCCACCATTTTCGACCCAAGAGTCGTAAGCACTAGTAG
ATACCGCCTGTTGAATGGAATCGACGGTTAATTATTCCGATTATATGGAG
GAGGCCCCCGTCTGTTCTCTACCCCAAAGTCATAGACAAGGCTGTTGCAG
GTAATTATTTCTTTGTGGTTCGTTGAGTTACGCTGGGCTCTTGAGTCAAA
AACACGTCAGCTGTGTGAGCTGTTCGAGCTTGGGTACCGTCACTGGTGGC
AACTACTGGCAGCTGATTCCCACCAACACGTCCTTTACTTTCATCTTGCG
TCATGCCCTTGATGACGTCACGTCCTTGATGACGCTACATACTACCATGC
TCTCATGAACCCCCTCCCGAGGCGCGCCTTGTGGGCACCATTGAACATAT
TGCCGCGTGTTGAATCGAATCGCCAAAAATCGCCCTCCCGCCTCGTCCCC
ACTCCTCAGGTCCGCGGAAGAGGCGGCCGCGGCTGCGGCGGCCTGGATGC
CCATGCAGGTACGCCCCTCCACAGCGCCCTCGCCCCCTCTTCCTCGCCCA
CCAGCCGAGCCCGCCCCTAAGGCCGCCGAAGCCGAGGATGCCGACGGCAG
CAACAACGATAAGGCGGCGGTGGTTGTGCCCACGGGTAACGGGAGTCCCC
CGCGAACGTTACGGCGCTTGGGGAGGGAGGCATCGTCATCGGCGGCGGCG
GCGGCGGCGGGGGCGGCGGCGGGGACGGGGACGGCGGAGAACGGGGGGGG
TTCTGGTGGAGGCGTTGTCGAGGAGGCCGTGACGCCGCCGCGGGCAGGAG
GAGGAGGAGGAGGAGGAGGGAGGGGGGAGGCTGGCGACGGTCGGCCCCCG
AGCCTGAACGTTCTGGTATGCATACGGGATTTGTTTTTGTCTTGTTTGTT
GGGCGGGGGCTTTGTTGACTTGACGGGCTGACCCTGGTGGTGTGTTTTTT
TTTCGCCTCTTGTCGCTGTCGCTGTTGGCGGCGGCCGCTTTGTTTACTTG
TTGACCTTCGTGTCGTGCTGCTGCTGTGTGCCGCCATAGGTGACGTGTAG
ATACCATACCACACCCCTTGGGCCGGTTGTTCAAAGCTCGATTATTCTCC
ACAGCAGAGCCAATAAATATATATATGAAGAAGAATGCCGGTGCCGAAAA
TAGCCGCGTTAGAACCGTAACCGTCGTATCGTTGAGAGAGAGCTTTCTTT
TCAAGGGAAATGTACAAAATGGTTTCAATTTTTTCGTCCTCTTACGGCAT
GTGGTAATCGAGCTTTGACAATCGGTCCAGGGGGTGTGGTAATCATCCAT
CACCTACAGCAACGTTAACATTCACGCGTCCCTCCGTGTCCTTTGAAACT
GGCTGGTTGTGAAGGAATCGAGAGCCTTGAAAGTCGATCTACAGGGGGAT
GGCATGATAGCGCTGGCGATCTCTCGCATGTTCTGGAGCACTGCTGGTTC
ATCGTGACGGCATAAGCACGTTCAACCCCCATGCCCTCCTCTCCCTTCTC
TTCTGTCTTTTTTTCCGAAACACAACAAGGAATTCATCTCTCTCCAGACA
TTATTTAGAGTCGAGGAAAAATAAGAAATACATTCTTTCGTCTGTATTTG
TGTTCATACGTACATAGCTTCACGATTCGCGGAAATCATATCATGTTCAT
GACGTACCCCGTCGTCTTTTTTGCTCCATCCAACACAGGGGGGGGGGCAG
GGGGGGGCGGATGTATTGTCCCAAACATTCTCGGAGCCCCCATCGCCGAC
CAACGAACACGACGAAGATGCCGACGTGCTGGACGCTTCGGGGCTAGGGG
GAGACGGGTGGGAGACGAGAAGAGCATGTCACTCGCGGAGGAACACCTTC
GGGCAGGGGCTGGGAGACTTGGGGGGAGGAGGAGGAGGGGGCGGAGGGGA
TGGCGGGATGGGGATGCTGGGCGAAGAAGACATCTTTGCAGACGAG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8730:18..6013- >mRNA_E_fasciculatus_S2_contig8730.16835.1 ID=mRNA_E_fasciculatus_S2_contig8730.16835.1|Name=mRNA_E_fasciculatus_S2_contig8730.16835.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1476bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8730:18..6013- (Ectocarpus fasciculatus EfasUO2)
TCCAGCGGCGCCCGCGGCGGGGGCGGCGGGGGCGGCGGCCTGGGTGCCAA
CGCCGATGTTTCTCCGGTGCCCAACGGCGGCGGTGCCGGCGAAGAAGAAG
GCGCTTCTTTCTTCCCGGGTTGGTCGGTCCCGGCCAGCTCCACCTTCTCC
GGCACCGGGCCCGCGGGGGGAGGCGCGGCCAGCAGGAACGTGGTGGACTT
GGGAAGCATTGGCGGCGACATGGGGCACCGTGCGTTGCCGCTGGCGGGAG
ATGGGGGGTCGAGGGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GTCGGGCAGCGCGCCCGAGCCACAACGGAGACGACGTCGCTGCCGGACAG
CGGTAGGAAGCGGTCGTTCAGCCTGTCGGCGAGGGGGGAGCCGGAGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGCGCCGTGGACTTCGACT
GCGACTGGGGGGGCACCGATGGCGGTGGGAGGTAACATCGTGGACGTAAT
CGTGGTGCACGGGTCGGACCCCGTTCCTCCCGGGTACTCGAAGCTGGAGC
GATCGTCGGGGGGGAAGCGAGCGGACCTGAACACGGGGGCACGGGGGCAG
TACGTCTATCTCGCGGTAAAGCGAGATACGCCTCTTGTGGACCAGGCGGA
AGGGGATGACGTGTCTCATCCGGGGGGGGGTAGGATGGTGGGCGTCCCCG
CTGTGGTTGCGCTGGCACTGATTTTTCCCGACCGAGGGGAGACTGTTCCC
CCCATGTTCCAGAAGGTACGACGGCGAGGCACGCCGGTCGACCTTAACGC
GGGGACGAATGGAGAAAGATCATTTCTCTGCTACAAGAGGGGCACCACCA
ACCCCATCACCGATATACAGGTCCGCGGAAGAGGCGGCCGCGGCTGCGGC
GGCCTGGATGCCCATGCAGCCGAGCCCGCCCCTAAGGCCGCCGAAGCCGA
GGATGCCGACGGCAGCAACAACGATAAGGCGGCGGTGGTTGTGCCCACGG
GTAACGGGAGTCCCCCGCGAACGTTACGGCGCTTGGGGAGGGAGGCATCG
TCATCGGCGGCGGCGGCGGCGGCGGGGGCGGCGGCGGGGACGGGGACGGC
GGAGAACGGGGGGGGTTCTGGTGGAGGCGTTGTCGAGGAGGCCGTGACGC
CGCCGCGGGCAGGAGGAGGAGGAGGAGGAGGAGGGAGGGGGGAGGCTGGC
GACGGTCGGCCCCCGAGCCTGAACGTTCTGGGGGGGGCGGATGTATTGTC
CCAAACATTCTCGGAGCCCCCATCGCCGACCAACGAACACGACGAAGATG
CCGACGTGCTGGACGCTTCGGGGCTAGGGGGAGACGGGTGGGAGACGAGA
AGAGCATGTCACTCGCGGAGGAACACCTTCGGGCAGGGGCTGGGAGACTT
GGGGGGAGGAGGAGGAGGGGGCGGAGGGGATGGCGGGATGGGGATGCTGG
GCGAAGAAGACATCTTTGCAGACGAG back to top
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