mRNA_E_fasciculatus_S2_contig873.16833.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: N/a (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ6_ECTSI) HSP 1 Score: 289 bits (740), Expect = 1.280e-91 Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 2
Query: 809 PGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRHGQPGRVFTTDEMDTLRESFATFDRSREGLVSVSVLVEILEHAGISDIEPEEVHALLEELQADPDTAISLPEMTEIVALLL 1267
PGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRH QPGRVFTTDEMDTLRESFATFD+S EGLVSV LV+ILEHAGI+DIEPEEVHALLEELQADPDTAISLPEMTEIVALLL
Sbjct: 193 PGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRHSQPGRVFTTDEMDTLRESFATFDQSGEGLVSVLALVDILEHAGITDIEPEEVHALLEELQADPDTAISLPEMTEIVALLL 345
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ5_9STRA) HSP 1 Score: 135 bits (341), Expect = 9.790e-33 Identity = 73/156 (46.79%), Postives = 100/156 (64.10%), Query Frame = 2
Query: 800 KEGPGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRS-VPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRHGQPGRVFTTDEMDTLRESFATFDRSREGLVSVSVLVEILEHAGISDIEPEEVHALLEELQADPDTAISLPEMTEIVALL 1264
KEGPGRY+Y ST KVYEGEWV G+P CGEY+D PA + PD +F LPEL L R+ AVLN+A+A I NERA R Q GR T +E++ L+ F D +G + + L +L+ AG+ ++E E + LL ELQA + PE+ +I+++L
Sbjct: 180 KEGPGRYMYRSTGKVYEGEWVRGSPWCGEYKDAPAPPGPAAGEPDEAFVLPELKLMRAGAVLNQAIARIHNERAARFHQGGRACTPEELERLQRLFDEADAEGQGQLPIGALRGLLQRAGV-EVEEEVIGQLLAELQAAETAVVLFPELLDILSIL 334
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBB9_PHYRM) HSP 1 Score: 133 bits (334), Expect = 9.860e-33 Identity = 83/216 (38.43%), Postives = 114/216 (52.78%), Query Frame = 2
Query: 701 VYDGGWLDGQRSGTGSLRLPGGDIFEGLWLKDKKEGPGRYLYMSTRKVYEGEWVEGTPKCGEYQD-MPAALVDRSVPDG----SFPLPELTLKRSSAVLNEAVAVIRNERAKRHG-----QPGRVFTTDEM-DTLRESFATF----------------DRSREGLVSVSVLVEILEHAGISDIEPEEVHALLEELQADPDTAISLPEMTEIVALLL 1267
VYDG W+ +RSG G+L L GD +EG WL D+KEGPGRY Y +TRK+YEGEWV+G PKCG Y D D DG +F LPEL L VL+E VA IR + + PG V ++M ++ FA ++R G + S L +L+ + D+ E++ LLEE+ A DT +S E +I++LL+
Sbjct: 9 VYDGEWVRNERSGRGTLVLATGDRYEGHWLNDRKEGPGRYFYKATRKMYEGEWVDGAPKCGTYHDDTEYNAQDDDFDDGEGHTAFQLPELELAHPDQVLSEGVAGIRQDPRRSSMTATELDPGAVVFDEQMLHAIQSEFAALLAAQSALLAESPDSPSIKTRSGCIPCSQLFHLLDVLQL-DVHEEQLSELLEEINASHDTLVSFAECVDILSLLM 223
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHE2_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.430e-23 Identity = 66/170 (38.82%), Postives = 95/170 (55.88%), Query Frame = 2
Query: 812 GRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVD-----------------RSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRHGQPG-RVFTTDEMDTLRESFATFDRSREGLVSVSVLVEILEHAGISDIEPEEVHALLEELQADPDTAISLPEMTEIVALLL 1267
GRY Y ST KVYEGEWV+ PKCGE+++ P D S G F LP+L L + +V+ EAVA IR +RAK G PG +VF + E+ +L++ FA +D G V+ L+ +L+ AG++ + P V L+ L+AD T ++ E +I ALL+
Sbjct: 194 GRYFYRSTSKVYEGEWVDDIPKCGEFKEAPPGSFDDFPVGGQADANPFAGVAASNSAGVFALPDLKLIQPDSVVTEAVATIRQQRAKDLGAPGLKVFESKEIQSLKKIFAAYDERDTGFVTCGDLLGLLQAAGVN-VTPSTVEDLVLSLEADSATQLTFAEFVDIAALLM 362
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZK6_9STRA) HSP 1 Score: 100 bits (248), Expect = 9.900e-20 Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 2
Query: 815 RYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVP--DGSFPLPELTLKRSSAVLNEAVAVIRNERAKRHGQPGRVFTTDEMDTLRESFATFDRSREGLVSVSVLVEILEHAGISDIEPEEVHALLEELQADPDTAISLPEMTEIVALLLT 1270
RY Y ST K+YEGEWV+G P+CG ++D + ++P D F LP L+L A+L + VA +R RA R F+ DE+ LR F D+ + GLV + +LE + ++ V LL EL AD DT ++L E ++ ALL++
Sbjct: 196 RYFYASTGKIYEGEWVDGAPRCGSFRDATPEEANGTLPSADEQFSLPALSLLEPEALLAKRVAELRQLRANATEDVVRAFSEDELAVLRHVFTLEDKQKAGLVPAVRVGYLLERCRLP-VDAVSVERLLGELGADDDTRVTLAEFVDMAALLMS 348
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A4F6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 3.200e-18 Identity = 66/166 (39.76%), Postives = 85/166 (51.20%), Query Frame = 2
Query: 809 PGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRH----GQPGRVFTTDEMDTLR---ESFATFDRSREGLVSVSVLVEIL------EHAGISDIEPEEVHALLEELQADPDTAISLPEMTEIVALLL 1267
PGR+ Y ST KVYE EW T KCG Y D A D + +F LPEL L +VLN+ + +R R K P V T +T R + F D +R+G++ +V+IL E SD+ V ALL EL A DTAI+LPE +IVALL+
Sbjct: 71 PGRFYYKSTGKVYEAEWQNDTAKCGTYHDSGDAEWDPTATTEAFTLPELELAAPESVLNDTILRLREARLKDQVTSSQSPTSVVFTLSQETQRRVHDEFHAIDFNRKGVIRCVDVVQILTSLVGEEEEASSDLHVR-VEALLGELGASYDTAITLPECMDIVALLM 235
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZB05_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 4.620e-17 Identity = 76/217 (35.02%), Postives = 98/217 (45.16%), Query Frame = 2
Query: 692 QDKVYDGGWLDGQRSGTGSLRLPGGDIFEGLW------------------LKDKKEGPGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRHGQPGRVFTTDE--MDTLRESFATFDRSREGLVSVSVLVEILEHAGISDIEPE-----EVHALLEELQADPDTAISLPEMTEIVALLL 1267
Q Y G W + + G G+ + G+ +EG W L DKKEGPGR+ Y ST KVYE EW T KCG A + + D L E LK V RN R++ VFT E ++E F D R G++ +V+IL+ G+ D E V ALL EL A DTAI+LPE +IVALL+
Sbjct: 192 QAAKYTGDWQNDMKCGYGTQQCASGNKYEGEWKDGLRHGKANXXXXXXXXLHDKKEGPGRFYYKSTGKVYEAEWQNDTAKCG------LAAPESVLNDTILQLREARLKDQ---------VRRNSRSQ-SAPSSVVFTLSEAVQRRVQEEFHAIDYHRRGVIRCVDVVQILQ--GVVDQHDETNYHVRVEALLHELGASYDTAITLPECMDIVALLM 390
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GCT7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 6.980e-17 Identity = 65/165 (39.39%), Postives = 85/165 (51.52%), Query Frame = 2
Query: 809 PGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRH----GQPGRVFTTDEMDTLR---ESFATFDRSREGLVSVSVLVEILEH-AGISDIEPEEVH----ALLEELQADPDTAISLPEMTEIVALLL 1267
PGR+ Y ST KVYE EW T KCG Y D A D + +F LPEL L +VLN+ + +R R K P V T +T R + F D +R G++ +V+IL G + E ++H ALL EL A DTAI+LPE +IVALL+
Sbjct: 204 PGRFYYKSTGKVYEAEWQNDTAKCGTYHDSGDAEWDPTAMTEAFTLPELELAAPESVLNDTILRLREARLKDQVTSSQSPTSVVFTLSQETQRRVHDEFHAIDFNRNGVIRCVDVVQILTLLVGEEEEESSDLHVRVEALLGELGASYDTAITLPECMDIVALLM 368
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: EF-hand (domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7X1T2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 9.270e-17 Identity = 74/222 (33.33%), Postives = 97/222 (43.69%), Query Frame = 2
Query: 692 QDKVYDGGWLDGQRSGTGSLRLPGGDIFEGLW------------------LKDKKEGPGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRH----GQPGRVFTTDEMDTLR---ESFATFDRSREGLVSVSVLVEILEH-AGISDIEPEEVH----ALLEELQADPDTAISLPEMTEIVALLL 1267
Q Y G W D +SG G+ G+ +EG W L D+KEGPGR+ Y ST KVYE EW T KCG L L +VLN+ + +R R K P V T +T R + F D +R G++ +V+IL G + E ++H ALL EL A DTAI+LPE +IVALL+
Sbjct: 69 QAAKYTGDWHDDVKSGYGTQLCASGNKYEGEWKDGCRHGKANXXXXXXXXLHDQKEGPGRFYYKSTGKVYEAEWQNDTAKCG-----------------------LELAAPESVLNDTILRLREARLKDQVTSSQSPTSVVFTLSQETQRRVHDEFHAIDFNRNGVIRCVDVVQILTLLVGEEEEESSDLHVRVEALLGELGASYDTAITLPECMDIVALLM 267
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8B3_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.710e-16 Identity = 63/167 (37.72%), Postives = 81/167 (48.50%), Query Frame = 2
Query: 809 PGRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRHGQPGR---------VFTTDE--MDTLRESFATFDRSREGLVSVSVLVEILEHAGISDIEPE---EVHALLEELQADPDTAISLPEMTEIVALLL 1267
PGR+ Y ST KVYE EW T KCG Y D D + +F LPEL L +VLN+ + +R R K + VFT E ++E F D R G++ +V+IL+ E V ALL EL A DTAI+LPE +IVALL+
Sbjct: 385 PGRFYYKSTGKVYEAEWQNDTAKCGTYHDSGDTEWDSAATTEAFTLPELELAAPESVLNDTILQLREARLKEQVRRNSRSPSAPSSVVFTLSEAVQRRVQEEFHAIDYHRRGVIRCVDIVQILQDVVDQHDETNYHVRVEALLHELGASYDTAITLPECMDIVALLM 551 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig873.16833.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig873.16833.1 >prot_E_fasciculatus_S2_contig873.16833.1 ID=prot_E_fasciculatus_S2_contig873.16833.1|Name=mRNA_E_fasciculatus_S2_contig873.16833.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=233bp MISEMGWASSSMRTGEGTRGAGWQTAAAAREDCLSPMERQDKVYDGGWLDback to top mRNA from alignment at E_fasciculatus_S2_contig873:10126..15097+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig873.16833.1 ID=mRNA_E_fasciculatus_S2_contig873.16833.1|Name=mRNA_E_fasciculatus_S2_contig873.16833.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4972bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig873:10126..15097+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig873:10126..15097+ >mRNA_E_fasciculatus_S2_contig873.16833.1 ID=mRNA_E_fasciculatus_S2_contig873.16833.1|Name=mRNA_E_fasciculatus_S2_contig873.16833.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=699bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig873:10126..15097+ (Ectocarpus fasciculatus EfasUO2)back to top |