prot_E_fasciculatus_S2_contig8691.16800.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8691.16800.1
Unique Nameprot_E_fasciculatus_S2_contig8691.16800.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length297
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8691.16800.1 vs. uniprot
Match: D8LJP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP4_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 7.770e-57
Identity = 175/307 (57.00%), Postives = 194/307 (63.19%), Query Frame = 0 
Query:    1 RSSPRADRVGGQKKRRGAGAATPASTVFGPTA---PASGKPPIAPPPMRRPQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVXXXXXXXXXXXXXXXXXXMPPTAASLXAAVAVMPAAVPSG-RLSYGSLAVAVNAAVAXXXXXXXXPP------PTPPGQLFGAPTSLPFLFQSQALARDEMDVDPSKSERVSTAKAMMANALASVAQVKLNLAGR-AVTKAEEEARVLQSVIADADLARAVAAMEELREAEWAANRMDVDDEDDFEGPWPMEVDG 296
            R SPRADRVGGQKKRRGAGA TPASTV GPT    PAS KPPIAPPP+RRP H                                     XXXXXXXXXXXX       A          XXXXXXXX  MPP A S  A             + S GS+A A  AA  XXXXXXXX        P PPGQLFGA +S    FQ+Q LARD+MDVDPSK ER+STA A+MA ALASV Q KL+LAGR +++KAEEEA + QSVIADADLARA AAMEELREAEWA+N+MDVDD++++EGPWPMEVDG
Sbjct:   42 RCSPRADRVGGQKKRRGAGAGTPASTVVGPTTMPVPASTKPPIAPPPVRRPLHARKSAFIGFPAHPSPVTTAGPAVRLSILSSPSMPRVGXXXXXXXXXXXXTA-----ASRSTVGPAAVXXXXXXXXAVMPPAAPSFQAXXXXXXXXXXXXXQPSQGSMAAARYAAAVXXXXXXXXXXXXXMSSPAPPGQLFGAASSWSSAFQTQQLARDDMDVDPSKLERISTATAVMARALASVLQAKLSLAGRPSMSKAEEEALLWQSVIADADLARAQAAMEELREAEWASNQMDVDDDEEYEGPWPMEVDG 343
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BLAST of mRNA_E_fasciculatus_S2_contig8691.16800.1 vs. uniprot
Match: A0A6H5JUB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB7_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 9.600e-46
Identity = 95/156 (60.90%), Postives = 116/156 (74.36%), Query Frame = 0 
Query:  142 MPAAVPSGRLSYGSLAVAVNAAVAXXXXXXXXPPPTPPGQLFGAPTSLPFLFQSQALARDEMDVDPSKSERVSTAKAMMANALASVAQVKLNLAGRA-VTKAEEEARVLQSVIADADLARAVAAMEELREAEWAANRMDVDDEDDFEGPWPMEVDG 296
            MP+AVPSG+ SYGS+A A   A A          P PPGQL GA +S   +FQ+Q LARD+MDVDPSK ER+  A AM+ +ALASV Q KL+LA R  +TK EE A +LQSVI DADLA A AAM+ELR AEWA+N+M+VDD++++EGPWPMEVDG
Sbjct:    1 MPSAVPSGQSSYGSMA-ATRYAAAAVSNAAAMSAPAPPGQLLGAASSWSSVFQTQHLARDDMDVDPSKRERMCRATAMIPSALASVVQAKLSLASRPFLTKVEEAALLLQSVIGDADLASAQAAMKELRAAEWASNQMEVDDDEEYEGPWPMEVDG 155
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8691.16800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJP4_ECTSI7.770e-5757.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUB7_9PHAE9.600e-4660.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8691contigE_fasciculatus_S2_contig8691:1558..3069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8691.16800.1mRNA_E_fasciculatus_S2_contig8691.16800.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8691 1558..3069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8691.16800.1 ID=prot_E_fasciculatus_S2_contig8691.16800.1|Name=mRNA_E_fasciculatus_S2_contig8691.16800.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=297bp
RSSPRADRVGGQKKRRGAGAATPASTVFGPTAPASGKPPIAPPPMRRPQH
ARKPAFGGFPATPSPATTAGPTTRPSVLNSPSVRRAGGARGAAAAGASAS
TSAVGPAVVVAATGATGATGVTGVTAVMPPTAASLPAAVAVMPAAVPSGR
LSYGSLAVAVNAAVAAAAATAVRPPPTPPGQLFGAPTSLPFLFQSQALAR
DEMDVDPSKSERVSTAKAMMANALASVAQVKLNLAGRAVTKAEEEARVLQ
SVIADADLARAVAAMEELREAEWAANRMDVDDEDDFEGPWPMEVDG*
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