mRNA_E_fasciculatus_S2_contig8680.16790.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8680.16790.1
Unique NamemRNA_E_fasciculatus_S2_contig8680.16790.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: N-acetyltransferase (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD73_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 9.310e-21
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RRKGLAKRLVK CED CR WGYDEVLLLVEENNKRARRLYSKLGYK
Sbjct:  223 RRKGLAKRLVKQCEDVCREWGYDEVLLLVEENNKRARRLYSKLGYK 268
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: N-acetyltransferase (domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D5J2_EMIHU)

HSP 1 Score: 63.5 bits (153), Expect = 2.550e-12
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RR+GLA+RL +  E   R WGYDEVLL VE +N+RAR+LY KLGY+
Sbjct:   13 RRRGLAQRLCREAEGLAREWGYDEVLLKVERDNRRARKLYRKLGYR 58
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: Hypothetical (protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RU52_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 1.160e-11
Identity = 27/46 (58.70%), Postives = 38/46 (82.61%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RR+GLA +L++ CE+ C+ WGY+E+LL VE  N +AR+LYSKLGY+
Sbjct:  208 RRRGLAVQLMRECEEQCKEWGYEEILLFVEATNPKARKLYSKLGYR 253
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: Hypothetical (protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CH37_9CHLO)

HSP 1 Score: 65.5 bits (158), Expect = 2.570e-11
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RR+G+AK+L+  CE  C  WGY E+ LLVE++N +ARRLY KLGYK
Sbjct:  190 RRRGIAKKLMSRCERVCAEWGYQEIWLLVEKDNPKARRLYRKLGYK 235
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: Acyl-CoA (N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB41_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.450e-10
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RRKG+ ++LV+ CE   + WGY E+LLLV E N  ARRLYSKLGYK
Sbjct:  194 RRKGIGQKLVRACEAKVKSWGYAELLLLVNETNSPARRLYSKLGYK 239
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NCK5_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 1.470e-9
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RRKG+AKRL +  E + R WGY EVLL VE  NK+AR LY  LGY+
Sbjct:  141 RRKGIAKRLCRAAEQSARSWGYTEVLLKVEAENKKARNLYRSLGYR 186
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: N-acetyltransferase (domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCI5_DIALT)

HSP 1 Score: 59.3 bits (142), Expect = 2.020e-9
Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RR+G+A++LV+ CED  R WG+D++ L VE  N  AR+LY KLGY+
Sbjct:  116 RRRGIARKLVRKCEDEVRAWGFDKLYLKVEAPNSPARKLYEKLGYR 161
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0T8_CHRCT)

HSP 1 Score: 59.3 bits (142), Expect = 4.250e-9
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RRKG+AKRL K  E     WG DE+LL VE +N+RA++LY KLGY+
Sbjct:  191 RRKGIAKRLCKEAEKAAISWGCDEILLKVENSNRRAQKLYRKLGYR 236
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: N-acetyltransferase (domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MRL4_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 1.100e-8
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK 138
            RRKG+AK+L++  E+  + WGY E+ LLVE++N +AR+LY  LG+K
Sbjct:  195 RRKGIAKKLMREAEEVAKAWGYQELWLLVEKDNPKARKLYGGLGFK 240
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BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Match: N-acetyltransferase (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYN2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.190e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 1 
Query:    1 RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGY 135
            RR+G+ +RLV  CE+  R WGYDE++L VE++N+ AR LY  +GY
Sbjct:  437 RRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQHARNLYRDMGY 481
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8680.16790.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
N-acetyltransferase9.310e-2193.48domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
N-acetyltransferase2.550e-1263.04domain-containing protein (Fragment) n=1 Tax=Emili... [more]
Hypothetical1.160e-1158.70protein n=1 Tax=Pyramimonas obovata TaxID=1411642 ... [more]
Hypothetical2.570e-1160.87protein n=1 Tax=Chloropicon roscoffensis TaxID=146... [more]
Acyl-CoA1.450e-1063.04N-acyltransferase n=1 Tax=Tribonema minus TaxID=30... [more]
Hypothetical1.470e-960.87protein n=1 Tax=Phaeocystis antarctica TaxID=33657... [more]
N-acetyltransferase2.020e-954.35domain-containing protein n=1 Tax=Diacronema luthe... [more]
Hypothetical4.250e-958.70protein n=1 Tax=Chrysotila carterae TaxID=13221 Re... [more]
N-acetyltransferase1.100e-852.17domain-containing protein n=1 Tax=Chloropicon prim... [more]
N-acetyltransferase1.190e-853.33domain-containing protein n=1 Tax=Nannochloropsis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8680contigE_fasciculatus_S2_contig8680:5179..5704 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score98.2
Seed ortholog evalue1.1e-18
Seed eggNOG ortholog2880.D7FR70
Model size138
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
EggNOG free text desc.Acetyltransferase (GNAT) family
EggNOG OGs2CZ1H@1,2S7TP@2759
Cds size138
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842524.9667308-CDS-E_fasciculatus_S2_contig8680:5178..52321696842524.9667308-CDS-E_fasciculatus_S2_contig8680:5178..5232Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8680 5179..5232 +
1696842524.9862366-CDS-E_fasciculatus_S2_contig8680:5620..57041696842524.9862366-CDS-E_fasciculatus_S2_contig8680:5620..5704Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8680 5621..5704 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8680.16790.1prot_E_fasciculatus_S2_contig8680.16790.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8680 5179..5704 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8680.16790.1

>prot_E_fasciculatus_S2_contig8680.16790.1 ID=prot_E_fasciculatus_S2_contig8680.16790.1|Name=mRNA_E_fasciculatus_S2_contig8680.16790.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=46bp
RRKGLAKRLVKHCEDTCRGWGYDEVLLLVEENNKRARRLYSKLGYK
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mRNA from alignment at E_fasciculatus_S2_contig8680:5179..5704+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8680.16790.1 ID=mRNA_E_fasciculatus_S2_contig8680.16790.1|Name=mRNA_E_fasciculatus_S2_contig8680.16790.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=526bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8680:5179..5704+ (Ectocarpus fasciculatus EfasUO2)
AGGAGAAAAGGGTTGGCGAAACGGCTGGTGAAGCACTGTGAAGACACTTG
TAGGGTAAGAGCGCAAACGCGGCAGCAAGTACAATGCAATGACACTTCTT
TCTCGTTTTTCTCTCACGAACTACAACAGAGGACGGCATCGTGATTCTCT
CTTGCTCAGCATCCTGATTTTTTTGTTGCTCAGAAAACTCGACAAAATAG
TATTTCGCCAGAAGAGTAACATTCCATCTCCCCAACGAGCAAGCGCTTGA
AGTAATGAAAAGGCAACTTTTTTCAAGGAGTCTGAAAGCCTTGCAGGGTC
GGCTTCGGTCCCTCGGCTAGACGGCTAACGGGGAAAACCGTTACAAAACG
CGCTGTGCGGAACGGGACCCCATGCACCAACGGGTACGGAGTAGACTAAT
ACTGACTCGACTCATGCACCAACCGATACCGAACGTTCCCAGGGATGGGG
CTATGACGAAGTTCTTTTGCTGGTAGAAGAAAACAACAAGCGGGCGAGAA
GACTCTACTCGAAGCTGGGGTACAAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8680:5179..5704+

>mRNA_E_fasciculatus_S2_contig8680.16790.1 ID=mRNA_E_fasciculatus_S2_contig8680.16790.1|Name=mRNA_E_fasciculatus_S2_contig8680.16790.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=138bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8680:5179..5704+ (Ectocarpus fasciculatus EfasUO2)
AGGAGAAAAGGGTTGGCGAAACGGCTGGTGAAGCACTGTGAAGACACTTG
TAGGGGATGGGGCTATGACGAAGTTCTTTTGCTGGTAGAAGAAAACAACA
AGCGGGCGAGAAGACTCTACTCGAAGCTGGGGTACAAG
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