mRNA_E_fasciculatus_S2_contig8672.16785.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8672.16785.1
Unique NamemRNA_E_fasciculatus_S2_contig8672.16785.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: N/a ((Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ41_ECTSI)

HSP 1 Score: 458 bits (1179), Expect = 7.620e-160
Identity = 256/329 (77.81%), Postives = 267/329 (81.16%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTG-----VRRRCMAILRLPIFFWIAAEGQRHVGLGTSAPRGGLETPRDPQALQRTPRIRDHAPTSALHGLRQRRCSSPRKPPRRATSTASEWW 972
            GGDTS ++ERVL+EEVHDAVSDLVELI T+QNKSKLAQVLTS+LFKRRQDELNAVMDRAIWGLHLGLQVQVGH VA               L+     ++STAEAQA  ESLAE RRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAA KVQHITHGLGKPGE DIP +GPR   SNALRE AERKAFLRELD MIRLRNPH VNVYGAITSLP RLVLVMELL G      RRRCMA L LP FFW+AAEGQR   LGTSA RGGL TPRDPQAL   P+IRD  PTSALHGL QR C SP KPPRRATSTA  WW
Sbjct:   13 GGDTSEEDERVLIEEVHDAVSDLVELIKTFQNKSKLAQVLTSSLFKRRQDELNAVMDRAIWGLHLGLQVQVGHNVAXXXXXXXXXXXXXAHLV-----ERSTAEAQA--ESLAEARRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAA-KVQHITHGLGKPGESDIPLSGPRMGESNALREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPGRLVLVMELLAGGDFGPSRRRCMATLSLPTFFWMAAEGQR---LGTSASRGGLRTPRDPQALPPPPQIRDQVPTSALHGLPQR-CWSPVKPPRRATSTALGWW 329          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L067_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 1.760e-111
Identity = 190/281 (67.62%), Postives = 210/281 (74.73%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVG---HGVAHL----------SSSFGRLCLVMCPLLLER------------------------IYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
            GGDTST+EERVLMEEVHDAVSDLVELI T+QNKSKL +VLTSTLFKRRQDELNAV+DRA+WGLH+ +   VG   H VAHL          S+ F     ++   LL R                        +YQ+STA+AQAQ ESLA+ RRSRRQ KLDQIEIPEDHVSITNE+LGKGGFGVVYLADYNGHNAAAKVQH THGLGKPG + IP +GPRT+ SNALR+ AERKAFLRELD MIRLRNPH VNVYGAITS PDRLVLVMEL  G   RC+
Sbjct:  135 GGDTSTEEERVLMEEVHDAVSDLVELIKTFQNKSKLGRVLTSTLFKRRQDELNAVIDRAVWGLHVQVGHDVGQVQHDVAHLVKGPSRGHSVSTIFTESPHLLIESLLWREGSVKQLRTGVFWPCASWCFSFVSMYQRSTADAQAQVESLAQARRSRRQHKLDQIEIPEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHTTHGLGKPGGNGIPLSGPRTIESNALRDKAERKAFLRELDAMIRLRNPHTVNVYGAITSRPDRLVLVMELQAGDHPRCL 415          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG3_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 1.090e-107
Identity = 191/275 (69.45%), Postives = 208/275 (75.64%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVG---HGVAHLSSSFGRLCLVM------CPLLLER----------------------------IYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTG 714
            GGDTST+EERVLMEEVHDAVSDLVELI T+QNKSKL ++LTSTLFKRRQDELNAV+DRA+WGLH+ +   VG   H VAHL     R   V         LL+E                             IYQ+STA+AQAQ ESLA+ RRSRRQ KLDQIEIPEDHVSITNE+LGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGE+ I  +GPRT+  NALR+ AERKAFLRELDTMIRLRNPH VNVYGAITSLPDRLVLVMELL G
Sbjct:  512 GGDTSTEEERVLMEEVHDAVSDLVELIKTFQNKSKLGKMLTSTLFKRRQDELNAVIDRAVWGLHVQVGHDVGQIQHDVAHLVKGASRGHSVSTFFTDSAHLLIESLLWSGGFSEAAQDVFFWPCASWCFSFVSIYQRSTADAQAQVESLAQARRSRRQHKLDQIEIPEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGENGISLSGPRTIEFNALRDKAERKAFLRELDTMIRLRNPHTVNVYGAITSLPDRLVLVMELLAG 786          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: TKL (family protein kinase protein kinase/ putative CTR1-like protein kinase/ leucine rich repeat pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ2_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 1.020e-87
Identity = 172/244 (70.49%), Postives = 178/244 (72.95%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
            GGDTST+EERVLMEEVHDAVSDL ELI TYQNKSKLAQ+LTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGH VAHL                    ++STAEAQA  ESLAE RRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK                                AERKAFLRELD MIRLR+PH VNVYGAITSLPD LV+VMELL G   R M
Sbjct:  782 GGDTSTEEERVLMEEVHDAVSDLNELIKTYQNKSKLAQLLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHDVAHL-------------------VKRSTAEAQA--ESLAEARRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKK-------------------------------AERKAFLRELDAMIRLRSPHTVNVYGAITSLPDGLVMVMELLAGGDLRAM 973          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Similar (to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 3.650e-86
Identity = 166/244 (68.03%), Postives = 176/244 (72.13%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
            GGDTST+E RVLMEEVH AVSDLVELI TY+NKSKLAQ+LTSTLFKRRQDELNAV+DRAIWGLHLGLQVQVGH VAHL                    ++STAEAQ QAES+AE RR RR+RKLDQ EIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK                                AERKAFLREL+ MIRLRNPH VNVYGAITS P+RLVLVMELL G   R M
Sbjct:  562 GGDTSTEEGRVLMEEVHGAVSDLVELIKTYENKSKLAQMLTSTLFKRRQDELNAVLDRAIWGLHLGLQVQVGHDVAHL-------------------VKRSTAEAQDQAESVAEARRLRRRRKLDQNEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKK-------------------------------AERKAFLRELEAMIRLRNPHTVNVYGAITSQPNRLVLVMELLAGGDLRAM 755          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 4.220e-85
Identity = 159/244 (65.16%), Postives = 191/244 (78.28%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
            GGDT+++ ER L+EEVHDAVSDLV+LI TYQNK+KL++VL STLFKRRQ+EL+AV+D+AI  LHLGLQVQVG  VA                    ++++STAEA+A  ESLAE RR+RRQRKLDQ+EIP+DHV IT EMLG+GGFG VYLADYNGHNAAAKVQ+I HG G+   DD+  NGP++   +A+RE  +RKAFLRELD MIRLR+PH VNVYGAITSLPDRL+LV+ELL G   R M
Sbjct:  639 GGDTNSEVERALIEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLD----------------LHKRSTAEAKA--ESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGR--RDDV-LNGPKSGQPDAVREKVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTM 861          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Leucine (rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 4.970e-83
Identity = 166/254 (65.35%), Postives = 175/254 (68.90%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVR----------RSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
            GGDTST+EERVLMEEVHDAVSDLVELIT+YQNKSKL +VLTSTLFKRRQDELNAV+DRAIWGLHLGLQVQVGH VAHL                    ++STAEAQAQA                 RSRRQRKLDQIEIPE+HVSIT E+LGKGGFGVVYLADYNGHNAAAK                                AERKAFLRELD M+RLRNPH VNVYGAITSLPDRLVLVMELL G   R M
Sbjct:  714 GGDTSTEEERVLMEEVHDAVSDLVELITSYQNKSKLGKVLTSTLFKRRQDELNAVIDRAIWGLHLGLQVQVGHDVAHL-------------------VKRSTAEAQAQAXXXXXXXXXXXXXXXTLRSRRQRKLDQIEIPEEHVSITTEVLGKGGFGVVYLADYNGHNAAAKK-------------------------------AERKAFLRELDAMVRLRNPHTVNVYGAITSLPDRLVLVMELLAGGDLRAM 917          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN5_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.460e-78
Identity = 144/244 (59.02%), Postives = 176/244 (72.13%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
            GGDT+ +  + LME+VHDAV DLVELI TYQ+K++L+ VL STLFKRRQDEL+AV+DRAI  LHLGLQVQVGH V+                  E  ++   +  +A +E LAE R +RRQR+LDQ+ IPEDHV IT+E+LGKGGFG V++ADYNG NAAAKVQH+ HG G+ GEDD+  NG     S+ L+   +RKAFL ELD M+RLR+PH VNVYGAITSL +R VLVMELL G   R M
Sbjct:  175 GGDTNGEAAQALMEDVHDAVCDLVELIKTYQSKNRLSNVLMSTLFKRRQDELDAVVDRAILRLHLGLQVQVGHDVSEAK---------------EVTHRHKGSMEEAMSEPLAEARSARRQRRLDQLAIPEDHVLITDEVLGKGGFGEVFIADYNGRNAAAKVQHVAHGFGRLGEDDL-LNGASKGESHTLQLQKQRKAFLHELDAMVRLRSPHTVNVYGAITSLLNRPVLVMELLAGGDLRSM 402          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X9_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.340e-77
Identity = 160/245 (65.31%), Postives = 170/245 (69.39%), Query Frame = 1
Query:   28 RVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVR----------RSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
            RVLMEEVHDAVSDLVELI TYQNKSK+ +VLTSTLFKRRQ ELNAV+DRAIWGLHLGLQVQVGH VAHL                    ++STAEAQ   ESLA+VR          RSRRQRKLDQIEIPEDHVSIT+EMLGKGGFGVVYLADYNGHNAAAK                                AERKAFLRELD MIRLR+PHIVN+YGAITSLPDRL+LVMELL G   R M
Sbjct: 1008 RVLMEEVHDAVSDLVELIKTYQNKSKVGKVLTSTLFKRRQGELNAVIDRAIWGLHLGLQVQVGHDVAHL-------------------VKRSTAEAQT--ESLAQVRAXXXXXXEARRSRRQRKLDQIEIPEDHVSITDEMLGKGGFGVVYLADYNGHNAAAKK-------------------------------AERKAFLRELDAMIRLRSPHIVNIYGAITSLPDRLILVMELLAGGDLRAM 1200          
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Putative (CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 1.180e-71
Identity = 148/244 (60.66%), Postives = 173/244 (70.90%), Query Frame = 1
Query:    1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
            GGDT+++ ER L+EEVHDAVSDLV+LI TYQNK+KL++VL STLFKRRQ+EL+AV+D+AI  LHLGLQVQVG  VA                    ++++STAEA+A  ESLAE RR+RRQRKLDQ+EIP+DHV IT EMLG+GGFG VYLADYNGHNAAAKV       GK                       +RKAFLRELD MIRLR+PH VNVYGAITSLPDRL+LV+ELL G   R M
Sbjct:  782 GGDTNSEVERALLEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLD----------------LHKRSTAEAKA--ESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKV-------GKK---------------------IQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTM 979          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
N/a7.620e-16077.81(Partial) (Fragment) n=1 Tax=Ectocarpus siliculosu... [more]
Protein1.760e-11167.62kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein1.090e-10769.45kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
TKL1.020e-8770.49family protein kinase protein kinase/ putative CTR... [more]
Similar3.650e-8668.03to CG1848-PA, isoform A/ leucine rich repeat prote... [more]
Protein4.220e-8565.16kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Leucine4.970e-8365.35rich repeat tyrosine kinase n=1 Tax=Ectocarpus sil... [more]
Protein1.460e-7859.02kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
Protein1.340e-7765.31kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Putative1.180e-7160.66CTR1-like protein kinase/ leucine rich repeat-cont... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8672contigE_fasciculatus_S2_contig8672:1817..6091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score266.2
Seed ortholog evalue2.1e-68
Seed eggNOG ortholog2880.D7G7X9
Preferred nameRIPK4
Model size987
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K14767,ko:K16175,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04390,ko04391,ko04530,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05165,ko05169,ko05203,map04064,map04210,map04217,map04390,map04391,map04530,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05165,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
Exons7
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG0515@1,COG4886@1,KOG0192@2759,KOG0619@2759
Ec32 ortholog descriptionProtein kinase
Ec32 orthologEc-02_004670.1
EC2.7.11.1
Cds size987
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8672.16785.1prot_E_fasciculatus_S2_contig8672.16785.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8672 1817..6091 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842524.4493058-CDS-E_fasciculatus_S2_contig8672:1816..18921696842524.4493058-CDS-E_fasciculatus_S2_contig8672:1816..1892Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8672 1817..1892 -
1696842524.46005-CDS-E_fasciculatus_S2_contig8672:3867..39871696842524.46005-CDS-E_fasciculatus_S2_contig8672:3867..3987Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8672 3868..3987 -
1696842524.4689205-CDS-E_fasciculatus_S2_contig8672:4342..44181696842524.4689205-CDS-E_fasciculatus_S2_contig8672:4342..4418Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8672 4343..4418 -
1696842524.4801333-CDS-E_fasciculatus_S2_contig8672:4521..47501696842524.4801333-CDS-E_fasciculatus_S2_contig8672:4521..4750Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8672 4522..4750 -
1696842524.4886246-CDS-E_fasciculatus_S2_contig8672:4967..52191696842524.4886246-CDS-E_fasciculatus_S2_contig8672:4967..5219Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8672 4968..5219 -
1696842524.497117-CDS-E_fasciculatus_S2_contig8672:5480..55221696842524.497117-CDS-E_fasciculatus_S2_contig8672:5480..5522Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8672 5481..5522 -
1696842524.5055404-CDS-E_fasciculatus_S2_contig8672:5899..60911696842524.5055404-CDS-E_fasciculatus_S2_contig8672:5899..6091Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8672 5900..6091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8672.16785.1

>prot_E_fasciculatus_S2_contig8672.16785.1 ID=prot_E_fasciculatus_S2_contig8672.16785.1|Name=mRNA_E_fasciculatus_S2_contig8672.16785.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=329bp
GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQD
ELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQK
STAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVY
LADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAF
LRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCMAILRLP
IFFWIAAEGQRHVGLGTSAPRGGLETPRDPQALQRTPRIRDHAPTSALHG
LRQRRCSSPRKPPRRATSTASEWWRGRC*
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mRNA from alignment at E_fasciculatus_S2_contig8672:1817..6091-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8672.16785.1 ID=mRNA_E_fasciculatus_S2_contig8672.16785.1|Name=mRNA_E_fasciculatus_S2_contig8672.16785.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4275bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8672:1817..6091- (Ectocarpus fasciculatus EfasUO2)
GGTGGCGACACGAGCACGAAGGAGGAGCGCGTTTTGATGGAAGAAGTGCA CGACGCCGTCTCCGATCTCGTCGAGCTGATCACAACTTACCAGAACAAGA GTAAGCTCGCCCAGGTGTTGACATCGACCCTGTTCAAACGGCGCCAAGAC GAGTTGAACGCGGTTATGGACAGGGCCATCTGGGGCCTGCACGTGAGTGC CGTATGCCACAAGCAACTTTTTCAGTATGGATTTGTACCTCGACTGCGCA GCCATCCGCGCTAAAACTTGCGCTGTTGACTCTCAATGCCTAGTTTCTGC TAAGAGCTCACTCTGTATGCGTCGTTCATTGCTTTGAATTATCTCTGCGG GGTACCGTTTCACAAAGCGATGTTGCTTTTGGTAACGCGGGGTACACCTA ATGGGAACCTCGCAGAGTGGTCGGGCACGGCTGCAATCAGACGAGCATAG GGCTGCCTCATGATGCTGCTCACGTCGACCGAACTGTACAGGCAGGTAAT ACAGTAGGACTCCTACGGTTTCGCCTTACCTCCTGCCTTTTTCCATGTTG CCTGTTCGGTGTCGTCCAGTTGGGCTTGCAGGTGCAGGTGGGACACGGCG TTGCGCACCTTGTAAAGGTGAGGGGGTGCCACGGAGATAACGCAAGCTCT TATAAAAATCCTTCGATTTCCAACGCTGTTGCAACTGCAGCCCGCCGTAG GTTGTGCCTCGGTGGCTTTTACTAGCCACAGGCCAATCCGGGCTATACGC ATAGATACATAGGCCGGAACGCGGATGTACAGGACACCCTCTCGAGGACA CCCTGTTTCCACCTTCTTCACAGACTCGCCTCACGTTTTGACCGCATCGC TTCTGTGGTGTGGAGGGTTCAGTCAAGCAGCTTTGGACGTTTGTGTTTGG TCATGTGCCCCTTGCTGCTCGAACGTATATACCAGAAGTCAACGGCGGAA GCTCAGGCTCAGGCAGAATCTCTGGCGGAAGTCCGCAGGTCGAGGCGGCA GCGCAAGCTTGACCAGATCGAAATCCCGGAGGATCACGTGTCGATCACGA ACGAGATGCTGGGAAAGGGGGGCTTTGGCGTGGTATACCTCGCAGACTAC AACGGCCACAACGCGGCGGCCAAGGTATGAGTAAGCCATTCTCGACCTGT AGGCGGAGCATCTGCGAGTACAGCATAACCGCCGAGCGAGCGAGTAGGGC CTGCCTGGGGAGCGGAAGGACAAGCCCCAACCACTGGCAGGAGTCATTTT TCACGCCCTTTTCGTTTCCCGCTGTGGTGCCCTGTCTGACTCGTTTGTGT GTGGTTGTCGACGTCGGTACATTTATCACTGAATGATATAGGTACAGCAC ATCACCCACGGCCTCGGCAAGCCGGGAGAGGACGACATACCACGCAATGG GCCAAGGACGGTGGGGTCCAATGCACTGCGGGAGAATGCCGAGCGCAAGG CATTCCTGCGCGAACTGGACACCATGATTCGCCTGAGAAATCCTCATATC GTCAATGTCTACGGGGCGATCACCTCGCTGCCGGACCGCCTGGTTCTGGT CATGGAGCTGCTGACGGGCGGTGACCTTCGGGCCATGCTTAGGAACTCTG AGCACCCCGTTCCCGAGGACAAGTGCCGACAGATCATTCAGGACGTCTGC GCAGGGATGGCCTTTCTGCACAGTAAGGCGACGGTGCATGGCGATCTTAA GGCTGCCAATATTCTTCTGGATAGCCGCGGAAGGGCAAAGGCATGTTGGG TGTCTGGGGGTTGTCTTGTGCTGCACGCAGATCGTGTCGTATTTCCGCGC TGGATATGATCCTGGCTGTCTATGGAAGGGTTGTGGACTTACCCCGAGTT CCTGTCGCCGCGACTCTGATGATTAACGTGCTGGAGACCTGGCTCTGCAA GACGGCTCCCATGTATTTGCTTGTCGGTGGTGATGGTGTTGAATTCGGCC GAAGAACGAGCCGATTGTACCCATTTCCTCACTTTTCTGTGCATTTAACA TGAGCTCCGTTGTCACAGTACGCAATGTTCAAACCCACTATATCGCCCAG AATATATCTAAACATTGTTTTGCGTCCTGCTGATTTGTCGTGTAATCCCT CCAGATTGGGGACTTCGGCACCTCGAGGTGGGCTCGAAACACCGAGAGAT CCACAGGCCTTGCAACGTACACCACGAATCCGGGACCACGCACCCACATC AGCTTTGCATGGACTGCGCCAGAGGTAAGGAAACGGCCTGGGTTTTCTAT CGTTTTCCCTGCTTGGCTTGTACGGTTGATGCCAACAAGGCCGAGGTGCG GGGTATGCATACAAGCCTGGTGATGTGGAAAAATTCCCAACACGTCTGTT TAGAAACTAACGAATGCACGTTAGAAACGAACGAATGCACGTGGTCTAAT CATAGTAGTTGAGATGCACTTCAGCTGAATTCCCGCACTGCTTGCAGAAG TTAACATCATGTGATACATGCAGAGAAATCTAGACTGGACGGCGTACTCT AGAACTACGGCCAACGTAGGTTGCACTGAGCGTCTAGGCAAGCCGTCAGG CAACCTGCATGAATGCCTGTAGACTGAGGTTTGGAATTACTTCAGTTTAT CCGAGGGATTCGGAACACGTGCATCTTGTCAGCCAATTTGCGTATGTTGG CGTTTTTGTGAAACTCTTCGGTCTTGGAACCTCGACGTCTCTGTCGCCTT GGAAATCGTCCTCTCGGTGCTCTCCTTCTCTAACGAAGAACTAGTGTTGT GGTGACTGTTGTCTCGTGTGGTGCGGTGGCGAGCAAAAACCACAAACTTG TGCCAGCGGCTGCCGGCGCTGCAGCTAGAATTTTGCGATTCTCAAGAAAT CTTGGTCTACAGGTCCATGCGCACTTGTAGAGGAGAGTCTATATTCTTGG CACCGCCTCGCGCCTAACCGACTAGTTGTGCGCGTCGCGACGGTTTGAGG GATTTTGAACCCAAGTGTTAAGGGAAGATCAGCCTGACTCCAACAGGACT ACACGAGAGACCTTTGCCACACCCAAGTGTGAAACTACATCGTGCCCGTC GATGGTTGTGTAACTAAAGGACGGGTAGCTGACTTCTTTCCGTTAATCGG TGCAAAGCACACATCGCCAGAGTCATCTCGAACCACGACTCGTGCTTCAA AGCAAATGGCAGTGCCTCTGCGGTGTCAACACCGGCTGCACGAGCAGGGA GAGACGTAACCGGCGCCATTGGTGTTCTACGTGGGCGGTGGTTAGTTGGG CAGGCACACATCCGAAGTGGACCAAATGTGAAATTCACGGTGCTGTTCTC TCGTTGATAGCGCTTCAGCGATCCAGCGATCCTAGCGGGAGCAGTTCGTT GCTTTATCAGTAAAGGTGTACTTCTTCCGGTCCATCAGATAAACTCGTTT TGGAAAATCCGCCAGATGAGCTCACTACGAAAAGACGCATTTACACGGCC AAAAATTACTTATTTGACGGGAGACTGCTTATGCTTAGTCCGACGTACGT TTAGTATCACGATCGAGAAAAAAAACAGTTTTGGACCTGAGGTTAACAAG TTATCATCCTCGGGGCTATTCGTACTGGTTTGGCGAAAAAGCGGTGTAGC GCAATCCAGAAGTCAAATATTTCCCGAACGGTTGTTTTCACTGTTTTCCT GAGCTTATGGAGCAGACCACAATACCGAGATCGGTTCAGAGACCCCAACA CCGCACCACCTACACAGGGTCCTCTGCTTCCGTGGTTGGCCTGTTTGCTG TGGATGCTGTAGGTGCTGTGTTGGTCGGCTCGGCGACAAAAAACAAATAT TGTTTTGCGCCGTTCTCCGAAACGCCGTGGCCGTTTTTTTTTATTTATGT GACCGGAAGACCATCAGTCGGTGGATTGATTTTTTTCACGGCAGACTACC GCTGGTTACCATAGGTGTAGGTGGCTTCACCATAGAGGTATCGACAAAAA CCTCGGTCTTGAGTCCTTCTCCAGATCTTCACGAAAACAATGAAAAAACG TTTACATAGAAAAGGTCCCAAATGGGCACACGCTATTCGGCTTTTTGTGC TAAGTGGGCTTTTCTGATGGGCCGGAGGAAGAAGTACTTGCTACGTGCAA GTTGCGATTCGCATGTATATTGTCCTGGACCGGCGATCGAAGAGGCTTGT CCTCGGCGTTGTGATTGCGCGTCTGACATTGCTTTCATCTGCACGCGAGA AGGTGCTCGAGTCCAAGGAAACCTCCAAGGCGAGCGACGTCTACAGCTTC GGAATGGTGGCGTGGGAGGTGCTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8672:1817..6091-

>mRNA_E_fasciculatus_S2_contig8672.16785.1 ID=mRNA_E_fasciculatus_S2_contig8672.16785.1|Name=mRNA_E_fasciculatus_S2_contig8672.16785.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=987bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8672:1817..6091- (Ectocarpus fasciculatus EfasUO2)
GGTGGCGACACGAGCACGAAGGAGGAGCGCGTTTTGATGGAAGAAGTGCA
CGACGCCGTCTCCGATCTCGTCGAGCTGATCACAACTTACCAGAACAAGA
GTAAGCTCGCCCAGGTGTTGACATCGACCCTGTTCAAACGGCGCCAAGAC
GAGTTGAACGCGGTTATGGACAGGGCCATCTGGGGCCTGCACTTGGGCTT
GCAGGTGCAGGTGGGACACGGCGTTGCGCACCTTTCAAGCAGCTTTGGAC
GTTTGTGTTTGGTCATGTGCCCCTTGCTGCTCGAACGTATATACCAGAAG
TCAACGGCGGAAGCTCAGGCTCAGGCAGAATCTCTGGCGGAAGTCCGCAG
GTCGAGGCGGCAGCGCAAGCTTGACCAGATCGAAATCCCGGAGGATCACG
TGTCGATCACGAACGAGATGCTGGGAAAGGGGGGCTTTGGCGTGGTATAC
CTCGCAGACTACAACGGCCACAACGCGGCGGCCAAGGTACAGCACATCAC
CCACGGCCTCGGCAAGCCGGGAGAGGACGACATACCACGCAATGGGCCAA
GGACGGTGGGGTCCAATGCACTGCGGGAGAATGCCGAGCGCAAGGCATTC
CTGCGCGAACTGGACACCATGATTCGCCTGAGAAATCCTCATATCGTCAA
TGTCTACGGGGCGATCACCTCGCTGCCGGACCGCCTGGTTCTGGTCATGG
AGCTGCTGACGGGCGTAAGGCGACGGTGCATGGCGATCTTAAGGCTGCCA
ATATTCTTCTGGATAGCCGCGGAAGGGCAAAGGCATGTTGGATTGGGGAC
TTCGGCACCTCGAGGTGGGCTCGAAACACCGAGAGATCCACAGGCCTTGC
AACGTACACCACGAATCCGGGACCACGCACCCACATCAGCTTTGCATGGA
CTGCGCCAGAGAAGGTGCTCGAGTCCAAGGAAACCTCCAAGGCGAGCGAC
GTCTACAGCTTCGGAATGGTGGCGTGGGAGGTGCTGA
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