mRNA_E_fasciculatus_S2_contig8672.16785.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: N/a ((Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ41_ECTSI) HSP 1 Score: 458 bits (1179), Expect = 7.620e-160 Identity = 256/329 (77.81%), Postives = 267/329 (81.16%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTG-----VRRRCMAILRLPIFFWIAAEGQRHVGLGTSAPRGGLETPRDPQALQRTPRIRDHAPTSALHGLRQRRCSSPRKPPRRATSTASEWW 972
GGDTS ++ERVL+EEVHDAVSDLVELI T+QNKSKLAQVLTS+LFKRRQDELNAVMDRAIWGLHLGLQVQVGH VA L+ ++STAEAQA ESLAE RRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAA KVQHITHGLGKPGE DIP +GPR SNALRE AERKAFLRELD MIRLRNPH VNVYGAITSLP RLVLVMELL G RRRCMA L LP FFW+AAEGQR LGTSA RGGL TPRDPQAL P+IRD PTSALHGL QR C SP KPPRRATSTA WW
Sbjct: 13 GGDTSEEDERVLIEEVHDAVSDLVELIKTFQNKSKLAQVLTSSLFKRRQDELNAVMDRAIWGLHLGLQVQVGHNVAXXXXXXXXXXXXXAHLV-----ERSTAEAQA--ESLAEARRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAA-KVQHITHGLGKPGESDIPLSGPRMGESNALREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPGRLVLVMELLAGGDFGPSRRRCMATLSLPTFFWMAAEGQR---LGTSASRGGLRTPRDPQALPPPPQIRDQVPTSALHGLPQR-CWSPVKPPRRATSTALGWW 329
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L067_9PHAE) HSP 1 Score: 339 bits (870), Expect = 1.760e-111 Identity = 190/281 (67.62%), Postives = 210/281 (74.73%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVG---HGVAHL----------SSSFGRLCLVMCPLLLER------------------------IYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
GGDTST+EERVLMEEVHDAVSDLVELI T+QNKSKL +VLTSTLFKRRQDELNAV+DRA+WGLH+ + VG H VAHL S+ F ++ LL R +YQ+STA+AQAQ ESLA+ RRSRRQ KLDQIEIPEDHVSITNE+LGKGGFGVVYLADYNGHNAAAKVQH THGLGKPG + IP +GPRT+ SNALR+ AERKAFLRELD MIRLRNPH VNVYGAITS PDRLVLVMEL G RC+
Sbjct: 135 GGDTSTEEERVLMEEVHDAVSDLVELIKTFQNKSKLGRVLTSTLFKRRQDELNAVIDRAVWGLHVQVGHDVGQVQHDVAHLVKGPSRGHSVSTIFTESPHLLIESLLWREGSVKQLRTGVFWPCASWCFSFVSMYQRSTADAQAQVESLAQARRSRRQHKLDQIEIPEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHTTHGLGKPGGNGIPLSGPRTIESNALRDKAERKAFLRELDAMIRLRNPHTVNVYGAITSRPDRLVLVMELQAGDHPRCL 415
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG3_9PHAE) HSP 1 Score: 340 bits (873), Expect = 1.090e-107 Identity = 191/275 (69.45%), Postives = 208/275 (75.64%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVG---HGVAHLSSSFGRLCLVM------CPLLLER----------------------------IYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTG 714
GGDTST+EERVLMEEVHDAVSDLVELI T+QNKSKL ++LTSTLFKRRQDELNAV+DRA+WGLH+ + VG H VAHL R V LL+E IYQ+STA+AQAQ ESLA+ RRSRRQ KLDQIEIPEDHVSITNE+LGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGE+ I +GPRT+ NALR+ AERKAFLRELDTMIRLRNPH VNVYGAITSLPDRLVLVMELL G
Sbjct: 512 GGDTSTEEERVLMEEVHDAVSDLVELIKTFQNKSKLGKMLTSTLFKRRQDELNAVIDRAVWGLHVQVGHDVGQIQHDVAHLVKGASRGHSVSTFFTDSAHLLIESLLWSGGFSEAAQDVFFWPCASWCFSFVSIYQRSTADAQAQVESLAQARRSRRQHKLDQIEIPEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGENGISLSGPRTIEFNALRDKAERKAFLRELDTMIRLRNPHTVNVYGAITSLPDRLVLVMELLAG 786
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: TKL (family protein kinase protein kinase/ putative CTR1-like protein kinase/ leucine rich repeat pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ2_ECTSI) HSP 1 Score: 295 bits (754), Expect = 1.020e-87 Identity = 172/244 (70.49%), Postives = 178/244 (72.95%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
GGDTST+EERVLMEEVHDAVSDL ELI TYQNKSKLAQ+LTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGH VAHL ++STAEAQA ESLAE RRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK AERKAFLRELD MIRLR+PH VNVYGAITSLPD LV+VMELL G R M
Sbjct: 782 GGDTSTEEERVLMEEVHDAVSDLNELIKTYQNKSKLAQLLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHDVAHL-------------------VKRSTAEAQA--ESLAEARRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKK-------------------------------AERKAFLRELDAMIRLRSPHTVNVYGAITSLPDGLVMVMELLAGGDLRAM 973
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Similar (to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI) HSP 1 Score: 287 bits (735), Expect = 3.650e-86 Identity = 166/244 (68.03%), Postives = 176/244 (72.13%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
GGDTST+E RVLMEEVH AVSDLVELI TY+NKSKLAQ+LTSTLFKRRQDELNAV+DRAIWGLHLGLQVQVGH VAHL ++STAEAQ QAES+AE RR RR+RKLDQ EIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK AERKAFLREL+ MIRLRNPH VNVYGAITS P+RLVLVMELL G R M
Sbjct: 562 GGDTSTEEGRVLMEEVHGAVSDLVELIKTYENKSKLAQMLTSTLFKRRQDELNAVLDRAIWGLHLGLQVQVGHDVAHL-------------------VKRSTAEAQDQAESVAEARRLRRRRKLDQNEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKK-------------------------------AERKAFLRELEAMIRLRNPHTVNVYGAITSQPNRLVLVMELLAGGDLRAM 755
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE) HSP 1 Score: 286 bits (732), Expect = 4.220e-85 Identity = 159/244 (65.16%), Postives = 191/244 (78.28%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
GGDT+++ ER L+EEVHDAVSDLV+LI TYQNK+KL++VL STLFKRRQ+EL+AV+D+AI LHLGLQVQVG VA ++++STAEA+A ESLAE RR+RRQRKLDQ+EIP+DHV IT EMLG+GGFG VYLADYNGHNAAAKVQ+I HG G+ DD+ NGP++ +A+RE +RKAFLRELD MIRLR+PH VNVYGAITSLPDRL+LV+ELL G R M
Sbjct: 639 GGDTNSEVERALIEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLD----------------LHKRSTAEAKA--ESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGR--RDDV-LNGPKSGQPDAVREKVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTM 861
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Leucine (rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI) HSP 1 Score: 281 bits (719), Expect = 4.970e-83 Identity = 166/254 (65.35%), Postives = 175/254 (68.90%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVR----------RSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
GGDTST+EERVLMEEVHDAVSDLVELIT+YQNKSKL +VLTSTLFKRRQDELNAV+DRAIWGLHLGLQVQVGH VAHL ++STAEAQAQA RSRRQRKLDQIEIPE+HVSIT E+LGKGGFGVVYLADYNGHNAAAK AERKAFLRELD M+RLRNPH VNVYGAITSLPDRLVLVMELL G R M
Sbjct: 714 GGDTSTEEERVLMEEVHDAVSDLVELITSYQNKSKLGKVLTSTLFKRRQDELNAVIDRAIWGLHLGLQVQVGHDVAHL-------------------VKRSTAEAQAQAXXXXXXXXXXXXXXXTLRSRRQRKLDQIEIPEEHVSITTEVLGKGGFGVVYLADYNGHNAAAKK-------------------------------AERKAFLRELDAMVRLRNPHTVNVYGAITSLPDRLVLVMELLAGGDLRAM 917
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN5_ECTSI) HSP 1 Score: 258 bits (660), Expect = 1.460e-78 Identity = 144/244 (59.02%), Postives = 176/244 (72.13%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
GGDT+ + + LME+VHDAV DLVELI TYQ+K++L+ VL STLFKRRQDEL+AV+DRAI LHLGLQVQVGH V+ E ++ + +A +E LAE R +RRQR+LDQ+ IPEDHV IT+E+LGKGGFG V++ADYNG NAAAKVQH+ HG G+ GEDD+ NG S+ L+ +RKAFL ELD M+RLR+PH VNVYGAITSL +R VLVMELL G R M
Sbjct: 175 GGDTNGEAAQALMEDVHDAVCDLVELIKTYQSKNRLSNVLMSTLFKRRQDELDAVVDRAILRLHLGLQVQVGHDVSEAK---------------EVTHRHKGSMEEAMSEPLAEARSARRQRRLDQLAIPEDHVLITDEVLGKGGFGEVFIADYNGRNAAAKVQHVAHGFGRLGEDDL-LNGASKGESHTLQLQKQRKAFLHELDAMVRLRSPHTVNVYGAITSLLNRPVLVMELLAGGDLRSM 402
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X9_ECTSI) HSP 1 Score: 268 bits (685), Expect = 1.340e-77 Identity = 160/245 (65.31%), Postives = 170/245 (69.39%), Query Frame = 1
Query: 28 RVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVR----------RSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
RVLMEEVHDAVSDLVELI TYQNKSK+ +VLTSTLFKRRQ ELNAV+DRAIWGLHLGLQVQVGH VAHL ++STAEAQ ESLA+VR RSRRQRKLDQIEIPEDHVSIT+EMLGKGGFGVVYLADYNGHNAAAK AERKAFLRELD MIRLR+PHIVN+YGAITSLPDRL+LVMELL G R M
Sbjct: 1008 RVLMEEVHDAVSDLVELIKTYQNKSKVGKVLTSTLFKRRQGELNAVIDRAIWGLHLGLQVQVGHDVAHL-------------------VKRSTAEAQT--ESLAQVRAXXXXXXEARRSRRQRKLDQIEIPEDHVSITDEMLGKGGFGVVYLADYNGHNAAAKK-------------------------------AERKAFLRELDAMIRLRSPHIVNIYGAITSLPDRLILVMELLAGGDLRAM 1200
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Match: Putative (CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI) HSP 1 Score: 250 bits (639), Expect = 1.180e-71 Identity = 148/244 (60.66%), Postives = 173/244 (70.90%), Query Frame = 1
Query: 1 GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHGVAHLSSSFGRLCLVMCPLLLERIYQKSTAEAQAQAESLAEVRRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKPGEDDIPRNGPRTVGSNALRENAERKAFLRELDTMIRLRNPHIVNVYGAITSLPDRLVLVMELLTGVRRRCM 732
GGDT+++ ER L+EEVHDAVSDLV+LI TYQNK+KL++VL STLFKRRQ+EL+AV+D+AI LHLGLQVQVG VA ++++STAEA+A ESLAE RR+RRQRKLDQ+EIP+DHV IT EMLG+GGFG VYLADYNGHNAAAKV GK +RKAFLRELD MIRLR+PH VNVYGAITSLPDRL+LV+ELL G R M
Sbjct: 782 GGDTNSEVERALLEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLD----------------LHKRSTAEAKA--ESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKV-------GKK---------------------IQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTM 979 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8672.16785.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8672.16785.1 >prot_E_fasciculatus_S2_contig8672.16785.1 ID=prot_E_fasciculatus_S2_contig8672.16785.1|Name=mRNA_E_fasciculatus_S2_contig8672.16785.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=329bp GGDTSTKEERVLMEEVHDAVSDLVELITTYQNKSKLAQVLTSTLFKRRQDback to top mRNA from alignment at E_fasciculatus_S2_contig8672:1817..6091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8672.16785.1 ID=mRNA_E_fasciculatus_S2_contig8672.16785.1|Name=mRNA_E_fasciculatus_S2_contig8672.16785.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4275bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8672:1817..6091- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8672:1817..6091- >mRNA_E_fasciculatus_S2_contig8672.16785.1 ID=mRNA_E_fasciculatus_S2_contig8672.16785.1|Name=mRNA_E_fasciculatus_S2_contig8672.16785.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=987bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8672:1817..6091- (Ectocarpus fasciculatus EfasUO2)back to top |