mRNA_E_fasciculatus_S2_contig8671.16784.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: PRA-CH (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R7_9PHAE) HSP 1 Score: 316 bits (810), Expect = 2.020e-96 Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGAGRKAQVASLV 480
QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGAGRK QVASLV
Sbjct: 284 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGAGRKTQVASLV 443
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: Phosphoribosyl-AMP (cyclohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR4_ECTSI) HSP 1 Score: 254 bits (648), Expect = 1.340e-72 Identity = 133/160 (83.12%), Postives = 133/160 (83.12%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGAGRKAQVASLV 480
QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRK AQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGAGRK QVASLV
Sbjct: 328 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRK--------------------------AQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGAGRKTQVASLV 461
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB2_HETAK) HSP 1 Score: 195 bits (496), Expect = 8.270e-55 Identity = 98/145 (67.59%), Postives = 113/145 (77.93%), Query Frame = 1
Query: 13 GITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILG 447
GI +DCDSDA+ FTV QHG P AFCH NRR+CW +RGLG LER L R AP GSYTKRLF+DP LLRNKL+EEAQEL EAET +HVA EAAD+ YF+M RCAAAGV +EK+LD +S KLKRRPGNAKA RIA + ++G
Sbjct: 1 GIGLDCDSDALCFTVAQHGDPAAFCHLNRRDCWTGDRGLGKLERTLAARLRSAPAGSYTKRLFDDPALLRNKLLEEAQELVEAETPEHVASEAADLLYFLMARCAAAGVGVGAIEKDLDLKSRKLKRRPGNAKAHRIAAAEAVVG 145
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4U4_9STRA) HSP 1 Score: 197 bits (502), Expect = 3.590e-52 Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILG 447
QEL+GI++DCDSDA+ F V Q G PPAFCH NRR CW+ RG+G LER L +R AP GSYTKRLF+DP LLRNKL+EE QEL EAET VA EAADV YFMMVRC AAGV D+E++LD +SLK+KRRPGNAK RI +K++G
Sbjct: 286 QELKGISIDCDSDALCFRVDQKGDPPAFCHLNRRTCWDAGRGIGKLERTLTQRLANAPAGSYTKRLFDDPALLRNKLLEEVQELVEAETVGDVAAEAADVMYFMMVRCVAAGVKLADIERDLDAKSLKVKRRPGNAKRHRIEAAEKVVG 434
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: PRA-CH (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8I2_9STRA) HSP 1 Score: 194 bits (494), Expect = 6.830e-51 Identity = 99/150 (66.00%), Postives = 119/150 (79.33%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGA 450
QEL G+ VDCDSDA++F V Q G PPAFCH NRR+CW+E+RGLG L+R L R QA EGSYT++LF DP LLR+KLVEEAQEL+EA+ + VA EAADV YF MVRC AAGV+ ED+E+ LD R+LKL+RRPGNAKA RI +KIL +
Sbjct: 300 QELVGLDVDCDSDALRFVVRQRGKPPAFCHLNRRSCWQEDRGLGALQRTLEDRLHQAVEGSYTQKLFRDPDLLRHKLVEEAQELSEAKECEDVAAEAADVFYFAMVRCVAAGVTLEDIERHLDARTLKLQRRPGNAKAHRIDAAEKILSS 449
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: PRA-CH (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKL0_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.000e-49 Identity = 100/150 (66.67%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGA 450
Q L +++DCDSDA++F V QHG+PPAFCHFNRR CW E GLG LER L R+ AP GSYT RLF D LLRNKLVEEAQELAEA+ VA EAADV YF +VRCAAAGV +V LD+R+LKL+RRPGNAKA RIA GD IL A
Sbjct: 312 QALLALSMDCDSDALRFLVVQHGAPPAFCHFNRRACWAGEGGLGALERTLAARRASAPAGSYTARLFSDAALLRNKLVEEAQELAEAQAPDDVASEAADVLYFALVRCAAAGVGLREVGDWLDRRALKLRRRPGNAKAHRIAAGDAILKA 461
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIY7_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.020e-48 Identity = 97/148 (65.54%), Postives = 112/148 (75.68%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKIL 444
Q+L I DCDSDA++FTV QHGSPPAFCH N R CW GL LE+ L +R+ AP GSYTKRLFEDP LLRNKL+EEAQEL EAE HVA EAADV YF +VRCAAAGV+ +E L++R+LKLKRRPGNAKA RIA ++ L
Sbjct: 274 QDLFLIQADCDSDALRFTVHQHGSPPAFCHRNCRTCWGPHGGLTELEQTLAERRASAPAGSYTKRLFEDPELLRNKLLEEAQELIEAEEPDHVAAEAADVMYFALVRCAAAGVTIPQIEAHLNRRALKLKRRPGNAKAYRIAAAEEAL 421
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: PRA-CH (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3I1_GLOUD) HSP 1 Score: 184 bits (466), Expect = 7.730e-47 Identity = 99/148 (66.89%), Postives = 113/148 (76.35%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKIL 444
Q L + VDCDSDA++FTV Q G+ FCH N R CW E RGL HL++MLV R + APEGSYTKRLF DPVLLRNKLVEEAQELAEAET VA EAADV YF + RC AAG + +DVEK LDKR+LK+KRRPGN+KA RI +IL
Sbjct: 328 QALVQLDVDCDSDALRFTVEQTGA--GFCHLNTRTCWGEARGLQHLQQMLVSRLQDAPEGSYTKRLFNDPVLLRNKLVEEAQELAEAETISDVAGEAADVMYFAITRCVAAGATLKDVEKYLDKRALKVKRRPGNSKAYRIEAAAEIL 473
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: Probable (phosphoribosyl-amp cyclohydrolase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUA9_THAPS) HSP 1 Score: 177 bits (448), Expect = 1.510e-46 Identity = 95/150 (63.33%), Postives = 111/150 (74.00%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSP-PAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILG 447
Q L + VDCD DA++FTV Q G AFCH N CW E RGL HLE L +R + AP GSYTKRLFED +LLR+KLVEEAQEL+EA+TKQHVAEE ADV YF MVR A AGVS +D +ELD+R+ K+ RR G++K ERI GDKILG
Sbjct: 120 QTLHRLDVDCDGDALRFTVTQRGDDIRAFCHLNTLTCWGEPRGLRHLEGTLQQRLKDAPVGSYTKRLFEDEILLRDKLVEEAQELSEADTKQHVAEELADVLYFAMVRAAKAGVSIDDAVEELDRRTRKVTRRQGDSKVERIKAGDKILG 269
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE40_9STRA) HSP 1 Score: 176 bits (445), Expect = 5.360e-46 Identity = 98/152 (64.47%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 1 QELRGITVDCDSDAIKFTVWQHGSP-PAFCHFNRRNCWEEERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAADVTYFMMVRCAAAGVSWEDVEKELDKRSLKLKRRPGNAKAERIAEGDKILGAG 453
Q L I VDCDSDA++FTV Q G AFCH N CW E GL HLE L +R + APEGSYTKRLF+D LLR+KLVEEAQEL+EAE+KQHVAEE ADV YF MVR A AGVS +D ELDKR+ K+ RR G++KA RIA GD ILG G
Sbjct: 128 QVLHRIDVDCDSDALRFTVTQRGDDVAAFCHLNTFTCWGEPCGLRHLEATLKQRLKSAPEGSYTKRLFDDEQLLRDKLVEEAQELSEAESKQHVAEELADVIYFAMVRAAKAGVSIDDAAVELDKRARKVTRRKGDSKAFRIAAGDAILGKG 279 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8671.16784.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8671.16784.1 >prot_E_fasciculatus_S2_contig8671.16784.1 ID=prot_E_fasciculatus_S2_contig8671.16784.1|Name=mRNA_E_fasciculatus_S2_contig8671.16784.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=113bp MLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEEAAback to top mRNA from alignment at E_fasciculatus_S2_contig8671:629..6449+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8671.16784.1 ID=mRNA_E_fasciculatus_S2_contig8671.16784.1|Name=mRNA_E_fasciculatus_S2_contig8671.16784.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5821bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8671:629..6449+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8671:629..6449+ >mRNA_E_fasciculatus_S2_contig8671.16784.1 ID=mRNA_E_fasciculatus_S2_contig8671.16784.1|Name=mRNA_E_fasciculatus_S2_contig8671.16784.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=339bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8671:629..6449+ (Ectocarpus fasciculatus EfasUO2)back to top |