prot_E_fasciculatus_S2_contig8668.16780.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8668.16780.1
Unique Nameprot_E_fasciculatus_S2_contig8668.16780.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length159
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8668.16780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 64..88
e-value: 4.8
score: 15.9
coord: 132..155
e-value: 41.0
score: 8.2
coord: 10..34
e-value: 320.0
score: 1.0
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 66..86
e-value: 1.7
score: 9.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..154
e-value: 5.1E-26
score: 93.0
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 1..111
coord: 46..152
NoneNo IPR availablePANTHERPTHR27000:SF673LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDRcoord: 1..111
coord: 46..152
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8668contigE_fasciculatus_S2_contig8668:254..6165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8668.16780.1mRNA_E_fasciculatus_S2_contig8668.16780.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8668 254..6165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8668.16780.1 ID=prot_E_fasciculatus_S2_contig8668.16780.1|Name=mRNA_E_fasciculatus_S2_contig8668.16780.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=159bp
GEIPATLGQLGGLQVLYLQSNQLSGEWLQAKYDLSLGRVGVMHVEDVSAR
RLLGPWIPATLGQLGSLRQLYLDRNQLSGEIPATLGQLGSLERLLLSANK
LSGEWLQAENNLSSGRVGAKHVEDIPATLGQLGNLEVLYLESNQLSGEWL
QAEYGLCRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp