mRNA_E_fasciculatus_S2_contig8630.16752.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8630.16752.1
Unique NamemRNA_E_fasciculatus_S2_contig8630.16752.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: TFIID (and SAGA subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT3_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 3.900e-142
Identity = 243/312 (77.88%), Postives = 252/312 (80.77%), Query Frame = 1 
Query:    1 QVERKKLEEKKARLLAGRDDGEXXXXXXXXXXDDVRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQDGRDEMYLMKVVRCGPDDAFPAALRPRLSDEDKTKEGSEPARDAPPSKGAKEPAXXXXXXXXXXXXXXXXXXXARGRVEEEDLKWAAAPPMEVALLKQTEREVSI 936
            +VERKKLEEKKARLLAG DDGEXXXXXXX   DDVRAFARRQGMDAAVRDGD+VMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMF+HGAEAR LMRAWGGEHEERF DEMTLLKMVTA+EHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFV+EERSPLPFAQ             VVRCGPDDAFPAALRPR SD                 K  KEPA                    RG V+EEDLKWAAAPPMEVAL+KQTER+VS+
Sbjct:   40 EVERKKLEEKKARLLAGGDDGEXXXXXXXEGGDDVRAFARRQGMDAAVRDGDSVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDHGAEARGLMRAWGGEHEERFKDEMTLLKMVTAREHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVLEERSPLPFAQ-------------VVRCGPDDAFPAALRPRSSDXXXXXXXXXXXXXXXXXKATKEPAAPATTAGRGG---------GRG-VQEEDLKWAAAPPMEVALMKQTERDVSL 328
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: TFIID_NTD2 (domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL6_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 3.840e-85
Identity = 135/153 (88.24%), Postives = 140/153 (91.50%), Query Frame = 1 
Query:    1 QVERKKLEEKKARLLAGRDDGEXXXXXXXXXXDDVRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLV 459
            +VERK+LEEKKARLLAG DDGE     X    DDVRAFA RQGMDAAVRDGD+VMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMF+HGAEAR LMRAWGGEHEERF DEMTLLKMVTA+EHAEASDYCKLV
Sbjct:   40 EVERKRLEEKKARLLAGGDDGEDGSPGXGEGGDDVRAFAIRQGMDAAVRDGDSVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDHGAEARGLMRAWGGEHEERFKDEMTLLKMVTAREHAEASDYCKLV 192
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH71_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.740e-22
Identity = 72/95 (75.79%), Postives = 77/95 (81.05%), Query Frame = 1 
Query:  649 KVVRCGPDDAFPAALRPRLSDEDKTKEGSEPARDAPPSKGAKEPAXXXXXXXXXXXXXXXXXXXARGRVEEEDLKWAAAPPMEVALLKQTEREVS 933
            +VVRCGPDDAFPAALRPR SDEDK+KE SE ARD+PPSK  KEP  XXXXXXXXXXXX          VEEEDLKWAAAPPMEVALLKQTER+ +
Sbjct:   41 QVVRCGPDDAFPAALRPRSSDEDKSKEESEAARDSPPSKATKEPVAXXXXXXXXXXXX----------VEEEDLKWAAAPPMEVALLKQTERDAA 125
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: TFIID_NTD2 (domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A244_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.200e-21
Identity = 57/174 (32.76%), Postives = 95/174 (54.60%), Query Frame = 1 
Query:  103 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQD 624
            +  FAR+ G+       ++++ +G+  G+PE  ++AY  L +++  S ++YR EL AV FP+FVHCYL L+        RS    +  +H     +E+  L +V + +H   +DY + VL  KF V++ L + +LLN FL  + L L++ I+N R+  V+    P    Q  QD
Sbjct:  103 IDTFARQLGLSTEACTANHLLFYGLTGGNPEAYDEAYGKLLDWICNSLDMYRNELHAVAFPIFVHCYLELLSKGFVEAGRSFFHKYSADHTRLHLEELRTLSLVFSPQHLRENDYVREVLHSKFNVEMSLLSFELLNTFLSQERLFLLLSIVNERINLVVTSNQPGVQIQQLQD 276
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: Transcription (initiation factor TFIID subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WVH9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.110e-21
Identity = 53/165 (32.12%), Postives = 93/165 (56.36%), Query Frame = 1 
Query:  103 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSP 597
            +  +AR+ G+       ++++ +G+  G+PE  ++AY  L +++  S ++YR EL AV FPVFVHC+L L+        RS    +  +H     +E+ +L +V + +H   ++Y + VL  KF V++ L + +LLN FL  + L L++ I+N RV  V+    P
Sbjct:   95 IDKYARQLGLTTEACTANHLLFYGLTGGNPEAYDEAYEKLLDWICNSLDMYRNELHAVAFPVFVHCFLELLSKGFVEAGRSFFHRYATDHTRLHLEELRMLSIVFSPQHLRENEYVREVLHSKFNVEMSLLSFELLNTFLSQERLFLLLSIVNERVNLVVTSNQP 259
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: TFIID_NTD2 (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMW3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.000e-20
Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = 1 
Query:  103 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSP 597
            V  +A   G++      ++++ +G+  G P   E AY  L E++  S ++Y+ EL AV FP+FVHC+L LV       A + +R    +H      E+ LL MV    H  AS+Y + VL  KF V++ L + +LLNAFL ++ L L++ ILN RV  ++    P
Sbjct:  112 VEQYAHSLGLNTESCAANHILFYGMTGGDPSTYEHAYTQLMEWICNSLDMYKYELHAVAFPMFVHCFLELVAKGFAEHASAFLRRHAADHTRLHLAELRLLSMVLTPAHVRASEYAQQVLHSKFNVQMSLLSFELLNAFLGHEQLFLLLAILNERVNLIVTANQP 276
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: TFIID_NTD2 (domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2QFQ5_PHYPN)

HSP 1 Score: 99.8 bits (247), Expect = 1.480e-19
Identity = 53/182 (29.12%), Postives = 99/182 (54.40%), Query Frame = 1 
Query:  103 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQDGRDEMYLM 648
            +  +A++ G+       ++++ +G+  G+PE  ++AY  L +++  S ++YR EL AV FP+FVHC+L L+        RS    +  +H     +E+  L +V + +H   ++Y + VL  KF +++ L + +LLN FL  + L L++ I+N RV  V+    P    Q  QD  + + ++
Sbjct:   98 IDKYAQQMGLTTEACTANHLLFYGLTGGNPEAYDEAYGKLLDWICNSLDMYRNELHAVAFPIFVHCFLELLAKGFVEAGRSFFHRYASDHTRLHLEELRTLSLVFSPQHLRENEYVREVLHSKFNIEMSLLSFELLNTFLSQERLFLLLSIVNERVNLVVTSNQPGIQIQQLQDASNPVEVL 279
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: TFIID_NTD2 (domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRE8_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.360e-19
Identity = 54/175 (30.86%), Postives = 97/175 (55.43%), Query Frame = 1 
Query:  100 DVRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQD 624
            D+ +FAR+ G+       ++++ +G+  G P   ++AY  L +++  S ++YR EL AV FP+FVHC+L L+   +    +   + +  +H     +E+  L +V A +H   ++Y + VL  KF V++ L + +LLN FL  + L L++ ++N+RV  V+    P    Q  QD
Sbjct:  102 DLDSFARQLGLTTEACTANHLLFYGLTGGDPTAYDEAYGKLLDWICNSLDMYRSELHAVAFPLFVHCFLELLAKGYTEAGKRFFQRYATDHARLHLEELRTLSLVFAPQHLRENEYVREVLHSKFNVELSLLSFELLNTFLSQERLFLLLAMVNSRVNLVVTSNQPGLQIQQLQD 276
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: TFIID_NTD2 (domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5F6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.610e-19
Identity = 54/174 (31.03%), Postives = 94/174 (54.02%), Query Frame = 1 
Query:  103 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQD 624
            +  +AR+ G+       ++++ +G+  G P   ++AY  L +++  S ++YR EL AV FPVF+HC+L L+   +   AR   + +  +H     +E+  L +V +  H   ++Y + VL  KF V++ L + +LLN FL  + L L++ I+N RV  V+    P    Q  QD
Sbjct:   49 IDKYARQLGLTTEACTANHLLFYGLTGGDPVAYDEAYGKLLDWICNSLDMYRSELHAVAFPVFLHCFLELISKGYSEPARKFYQKYAADHTRLHLEELRTLSLVFSPHHLRENEYVREVLHSKFNVEMSLLSFELLNTFLSQEKLFLLLAIVNERVNLVVASNQPGIQIQQLQD 222
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BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Match: TFIID_NTD2 (domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CL81_SAPPC)

HSP 1 Score: 97.4 bits (241), Expect = 8.370e-19
Identity = 55/165 (33.33%), Postives = 89/165 (53.94%), Query Frame = 1 
Query:  103 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSP 597
            ++ FAR  G+       ++V+  G+ +  P   E AY  L +++  + ++Y+ EL A+ FP+FVHCYL LV       A++  R    +HE     E+  L  V  +EH   ++Y K VL  KF+VK+ L T +LL+ FL +  + L+++ILN RV   +    P
Sbjct:   39 LQEFARNMGLSMDACAANHVLFHGMNKADPNAYEHAYSKLLQWIGNALDMYKLELHAIAFPLFVHCYLELVAKGFTEPAKAFFRRHAKDHERLHRLELRQLGCVLTREHLTLNEYAKQVLHAKFQVKLSLLTFQLLHTFLSDYQMFLLLYILNERVNIAVTSNHP 203
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TFIID3.900e-14277.88and SAGA subunit n=1 Tax=Ectocarpus siliculosus Ta... [more]
TFIID_NTD23.840e-8588.24domain-containing protein (Fragment) n=1 Tax=Ectoc... [more]
Uncharacterized2.740e-2275.79protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
TFIID_NTD22.200e-2132.76domain-containing protein n=4 Tax=Phytophthora Tax... [more]
Transcription3.110e-2132.12initiation factor TFIID subunit (Fragment) n=1 Tax... [more]
TFIID_NTD21.000e-2035.15domain-containing protein n=1 Tax=Pythium brassicu... [more]
TFIID_NTD21.480e-1929.12domain-containing protein n=19 Tax=Phytophthora Ta... [more]
TFIID_NTD22.360e-1930.86domain-containing protein (Fragment) n=1 Tax=Notho... [more]
TFIID_NTD23.610e-1931.03domain-containing protein n=3 Tax=Phytophthora ker... [more]
TFIID_NTD28.370e-1933.33domain-containing protein n=2 Tax=Saprolegnia TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8630contigE_fasciculatus_S2_contig8630:262..4899 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score430.6
Seed ortholog evalue6.1e-118
Seed eggNOG ortholog2880.D7FXT3
Model size936
KEGG koko:K03130
KEGG Pathwayko03022,ko05168,map03022,map05168
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000280,GO:0000428,GO:0001673,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005730,GO:0006139,GO:0006351,GO:0006352,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007127,GO:0007140,GO:0007141,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016070,GO:0016591,GO:0018130,GO:0019222,GO:0019438,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0030154,GO:0030880,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0043073,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044798,GO:0046483,GO:0048232,GO:0048285,GO:0048468,GO:0048515,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0051321,GO:0051704,GO:0055029,GO:0060255,GO:0061695,GO:0061982,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090575,GO:0097659,GO:0140013,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1903046,GO:1990234
Exons5
EggNOG free text desc.transcription initiation from RNA polymerase II promoter
EggNOG OGsCOG2319@1,KOG0263@2759
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-03_001560.1
Cds size936
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842520.9955673-CDS-E_fasciculatus_S2_contig8630:261..5461696842520.9955673-CDS-E_fasciculatus_S2_contig8630:261..546Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8630 262..546 -
1696842521.0169516-CDS-E_fasciculatus_S2_contig8630:1375..15701696842521.0169516-CDS-E_fasciculatus_S2_contig8630:1375..1570Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8630 1376..1570 -
1696842521.0291011-CDS-E_fasciculatus_S2_contig8630:1982..21021696842521.0291011-CDS-E_fasciculatus_S2_contig8630:1982..2102Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8630 1983..2102 -
1696842521.0391505-CDS-E_fasciculatus_S2_contig8630:3430..35681696842521.0391505-CDS-E_fasciculatus_S2_contig8630:3430..3568Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8630 3431..3568 -
1696842521.0493486-CDS-E_fasciculatus_S2_contig8630:4701..48991696842521.0493486-CDS-E_fasciculatus_S2_contig8630:4701..4899Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8630 4702..4899 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8630.16752.1prot_E_fasciculatus_S2_contig8630.16752.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8630 262..4899 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8630.16752.1

>prot_E_fasciculatus_S2_contig8630.16752.1 ID=prot_E_fasciculatus_S2_contig8630.16752.1|Name=mRNA_E_fasciculatus_S2_contig8630.16752.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=312bp
QVERKKLEEKKARLLAGRDDGEDGSPGGGGGGDDVRAFARRQGMDAAVRD
GDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHC
YLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYC
KLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPL
PFAQASQDGRDEMYLMKVVRCGPDDAFPAALRPRLSDEDKTKEGSEPARD
APPSKGAKEPAAAAAAAAAAAAAAAAAGGGARGRVEEEDLKWAAAPPMEV
ALLKQTEREVSI
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mRNA from alignment at E_fasciculatus_S2_contig8630:262..4899-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8630.16752.1 ID=mRNA_E_fasciculatus_S2_contig8630.16752.1|Name=mRNA_E_fasciculatus_S2_contig8630.16752.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4638bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8630:262..4899- (Ectocarpus fasciculatus EfasUO2)
CAGGTGGAGAGAAAAAAGCTGGAAGAGAAGAAGGCTCGGCTGCTGGCTGG
AAGAGATGACGGCGAGGATGGGTCCCCCGGAGGGGGGGGAGGGGGGGATG
ACGTGCGGGCTTTCGCGAGACGGCAGGGCATGGACGCCGCCGTCCGAGAC
GGAGACAATGTGATGGCCTGGGGTATCCTCGAGGGCAGCCCAGAGAAGGT
GAAGAAGGGTGTTCTGGAAGCGCTGCCGTTTTCTTGGCAGTAGTAGGCTT
CGCGAGGGAGGACCCTAAGCTTGGTTTTGAGAAGGGTAGTCTTGAAGCCT
TGGGCAATGTGGTAGTTCCTATTCCCGAGGAATTTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTCCTCACATGAAAAACGGTTCCGATCTCTCTAC
CCTGTACCTTCATCTGTCCGTGCTGACCTAACACTTGACGCGGTCGATTT
CCGTGGTCACAGGCTAACGTACCCTACTAAATGTATACTGTATACTGTAC
TCAAATATACCCGAGTAATGGTAAGCTTGGCTTTAGCAGGGGTTACGGGG
TGGGGCTAGGGGTTTGGGCAAGGGTTGCGAACCCCCCCTCTCTGTTTCAT
GTATTCCATCCTTGCACAGGCGGCCCCTTTCTGGGGGAGGTTTCAGGCCA
CATAAACCATGTGCATATCGCTCTGTTGGAATTGTAGGGACAATTTGGGA
TTATTTTCACTGTTGTATACTCGAATGGCCCTAATAGTGCCTACACAGCA
GTCCGGCTGCGCCGAAATCCGGTGTTGCTTTCGGCCGTGCCAAAGTCCAG
GCATCGACAGCGTCGTACGTCCATATCAGTGTCATGGCAGCTGTTGATCG
TTGGACGGCAAGAATCCCCGCTCTGGATTCGACTCTCTAAAATCCACCTG
CTGAGACGGGGAGCGGGATTGATTTCCGACTACTACCGCGGCACTCTATC
TCTCTCTCTGTCTCTTCCGAGACCATTCCCCTTGCCAGAATCTCACGATA
GAGCACTGCCAGCCTCCGGTAGTGGATGGATGCTGACACCACGCGACTGA
CCGGGTGTCATTGTCCTTCCAACGAGGGTACCACTGTAGCCTGTGTCCTG
TCCTGTTGGGAGAAGCTGAAAGAGGCATTGCCGACATCGCTCGAGCCGAT
TCCAAACCAGGTCACATTTAGTAGTAATAGAACAAAACAACCACCACGTG
GTCCATCGTCGAACGCGCGTAGCTAGAGCTGACGCCACACAACAAACAAC
GGCGGTGGCAACACCATCCACTATTTAAGAGTCCTTGACGCTTCTTCTTA
AGCTGATGGCCGCCACCGCTGTCGTCGACAGGTGGAGCAAGCGTACCGGG
GCCTGAGCGAGTTCGTGGCGGCGTCGTGGGAGCTTTACAGGCCGGAGCTG
GAGGCGGTCATGTTTCCCGTGTTCGTGCACTGCTACCTCACGCTCGTCAT
GTTCAATCATGGAGCTGAGGTGCGACGCGAATGGATATCTGGGGGGGGGG
GGGGGGGGGGGGGACCTTGGATCAAGCCCAGCGGCGGGGATACGACATTT
TTTTCTTTTTTTTTTTTTTTTCTAACTTCACAGGGTTGTGNNNNNNNNNN
CCTCTGTGCTGGTGTGGGGGTGGGGGGGGGGGGGGGGGGGGGGAGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTACTCATGTGAAGCG
CATGCCGTAGTCGGCAGACTATTCATCTATTTATCTATTTATCTCACATA
CTGCCGGGATGGAGCGATCTGCTGCGTTTTCGCCGGCCCAAGCTACTTTT
CACAAGGGTGAACCAATAGCTGATTATCATCCTTGCGTTTTCGCTGGGTG
GGGGTATCTGACTTGCTTACGAGTGATTGGGTCGCACGTAGGGTATTCGC
CACCTTCCTCAGACACAGCAGCGGGTATGGACATGCGTTCCACAACAGTG
CTAAAAAATACGAGACGGTGACACCGTAAAGCGTTGGCGCGGCTCTGCTA
GCTCCTCGATTTTGGAAGTGCGCGCGTTACTCATCCGGCAGCTAGTTGCG
ATGTCACCAACGTCCGAAGTAGTTTTGAAGGGAGGCGGAGTAAGCCCCGT
TGGGTAAGTCGAGAAAATGTCGCGAGCCAGCCAGGCTCACAGCTGATATT
ATTTTTCGTCTTTTATATCATGGGGCCAAGAGTGTGTGTCAAGCAGAGGA
AATACCGTATTGTAGCCAATAACGTCACGTGTTGCTGGGATCCATGTTTC
CTTCGTTCATTCATTCGTTCGTTCGGTGTGTTTTACTTGTCGATGAGGTG
TGTTTTTGGAAAACCCACCGCATTTGTCAACGAAGAAAAGGCAGCAGTTG
TTGACTGGCTGCAGTACCTGGGCGGCGAACCGGGGGCACAGCGCTGAGAG
GGTGCCGTGGGTGTCTCAAATGTCCTCACACTGCATCGCTAGAGGCGATA
ACAACCGCAGCAACAACAAAACCACAACAACAGCAACAGCAACATCAGTC
ACCATGGCATGGGACTGATGTCGTGGGGGGGATGAATCCCGTACAAGCCC
CTACTATAGTGTTATATCGGAGGCGTTCCCATGGGCAGGGGGCGTGTTTT
TGTGTGTGTATGAGAGAGAGAGAGAGGGAGAGCTTGACCGCGCAACCTCC
CCCTCACGGTCACAGAATAGTGGGCTTCTTGAATCCCTCACCCCTCCTCG
AAGACCAAACGGGCATTCCGCTTTCCGATCATGGACAACGTGAGGCCTGA
TATTTGCGACCGACATGCGCGTTTTTTTGTTTAAATGCGAAACGCAGGCT
AGAAGCTTGATGCGAGCGTGGGGGGGCGAGCACGAGGAGAGGTTCAACGA
CGAGATGACGCTTCTCAAGATGGTCACGGCTAAGGAGCACGCCGAAGCCT
CGGACTACTGCAAGCTGGTGAAGTACTTACAGTAGTGTTTAGCAGGCAAC
CTAGATGCACCTATTTGATATGCTTCTGCACAAGTGTTGGTTGCCGTGTG
TAATGCTGTGGAGTTGCTCGTGCTGGGACTATTCTTTTGCTTGCCTTGAT
GGAGCTGGATGTGTGTATCGGTCGAATCCGGACGTGCGGGGAGCGCACAA
GTCTCCAATGACAACTGAAAATCTCAACAGCAGCAGCAGATGTAGCATAC
CGGTAAGGTAAAGACGAATCATGGGAGACTGAAGAGCTTGGGTAGCAACA
ACAGAGCCGGCGGCAGCAACGACGACGCACAATCATATGCCGACCACATC
GACACGAGAAGTGGCATCAACAACGCCGACGGCACCAACAAACAATGCCC
CCACCCAAAAAACGAAAAACACCGCACAGGTTCTCACGCACAAGTTTCGA
GTGAAGATCTGCCTGGCGACGTCTAAGCTCCTCAACGCCTTCCTGGTGAA
CAAGGGACTGCTTCTCGTCATGCACATCCTCAACACCCGGGTGCAGTTCG
TGATGGAGGAGCGGTCTCCTCTGCCCTTCGCGCAGGCAAGCCAAGACGGA
CGAGACGAGATGTACCTTATGAAAGTATTCTTAACATTCAATATCATGGA
TAGACTTTACTGAATCGCAGATAAGACTAGTAGGCGTTCGACATGGCGCA
TACCTGAATGGGAGGGATTCGTTGAAGTCTTTGCGGTGAGGTTTGTTTCG
TGCGAGGAGAAGCTCGTGCCTAGCTTAAGGACTTGGCCTGAGAAAACAGC
CCTGTGGTTTTCTGTATTTTCCCGTTGTGTACGTCAAAGTTCAAGGGTCT
CTTTGCCGGGAAAGCGGACATGTTGTTTTTTCGCCGAAGCTGCTGTCCTT
GTACGCATAGTAGCGATCCCCAAATGTCCTGGCGAGCGTTGCGGAATCTC
TGTTCCTCGATCGAGAACTTGTACGTGAGAAAAGGTGGAGAAAAGTTATT
TAGAAGAAAGGTACACCTCTGATGGTGTTGTTCTTTGCCGTCGTGGGAGA
CCCTTTCCCCTCTACACGAGTACCGTCCATACCGTCCAATCCGTCTAGGA
AAACAGAGGAGCCACATTGAGATATGATAGGGTCGTTGCCTTTGCTGCCC
CCCTTGCCGCTGCGTTACACGGACAACAGACGGGTAACCTCTTTTGTCTG
TTGTCGTCATTGTGTGTAGTCGGTGTTACCTACACCTATCTATCCTACGA
TGCTGGTATCTACCGTTGTTGCCGCCACCGCCACCGCCGTGTTGCCAAAC
AATACACGAAAACCCTGCGCACACACACAAAAGCGCCTTCTGTTTTCAGC
CGTAACTGGGGACCGACGTCTTTCTATTGTCCATACGGTTAGCGCGGTCG
GTCGATGCTACTAACAGCGAAACCATTACACACACGCACACAAACGCACA
CAGGTTGTGCGATGCGGACCAGACGATGCCTTTCCGGCCGCCCTCAGACC
TCGCTTGTCCGATGAGGACAAGACCAAAGAGGGGTCCGAACCGGCACGCG
ATGCGCCGCCATCGAAGGGGGCTAAGGAGCCCGCCGCTGCCGCCGCTGCC
GCCGCGGCCGCCGCCGCCGCCGCCGCCGCCGCTGGGGGAGGGGCGAGGGG
GAGGGTAGAGGAGGAGGACCTCAAGTGGGCCGCCGCGCCTCCGATGGAAG
TGGCGCTGTTGAAACAAACGGAGCGGGAAGTAAGTATT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8630:262..4899-

>mRNA_E_fasciculatus_S2_contig8630.16752.1 ID=mRNA_E_fasciculatus_S2_contig8630.16752.1|Name=mRNA_E_fasciculatus_S2_contig8630.16752.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=936bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8630:262..4899- (Ectocarpus fasciculatus EfasUO2)
CAGGTGGAGAGAAAAAAGCTGGAAGAGAAGAAGGCTCGGCTGCTGGCTGG
AAGAGATGACGGCGAGGATGGGTCCCCCGGAGGGGGGGGAGGGGGGGATG
ACGTGCGGGCTTTCGCGAGACGGCAGGGCATGGACGCCGCCGTCCGAGAC
GGAGACAATGTGATGGCCTGGGGTATCCTCGAGGGCAGCCCAGAGAAGGT
GGAGCAAGCGTACCGGGGCCTGAGCGAGTTCGTGGCGGCGTCGTGGGAGC
TTTACAGGCCGGAGCTGGAGGCGGTCATGTTTCCCGTGTTCGTGCACTGC
TACCTCACGCTCGTCATGTTCAATCATGGAGCTGAGGCTAGAAGCTTGAT
GCGAGCGTGGGGGGGCGAGCACGAGGAGAGGTTCAACGACGAGATGACGC
TTCTCAAGATGGTCACGGCTAAGGAGCACGCCGAAGCCTCGGACTACTGC
AAGCTGGTTCTCACGCACAAGTTTCGAGTGAAGATCTGCCTGGCGACGTC
TAAGCTCCTCAACGCCTTCCTGGTGAACAAGGGACTGCTTCTCGTCATGC
ACATCCTCAACACCCGGGTGCAGTTCGTGATGGAGGAGCGGTCTCCTCTG
CCCTTCGCGCAGGCAAGCCAAGACGGACGAGACGAGATGTACCTTATGAA
AGTTGTGCGATGCGGACCAGACGATGCCTTTCCGGCCGCCCTCAGACCTC
GCTTGTCCGATGAGGACAAGACCAAAGAGGGGTCCGAACCGGCACGCGAT
GCGCCGCCATCGAAGGGGGCTAAGGAGCCCGCCGCTGCCGCCGCTGCCGC
CGCGGCCGCCGCCGCCGCCGCCGCCGCCGCTGGGGGAGGGGCGAGGGGGA
GGGTAGAGGAGGAGGACCTCAAGTGGGCCGCCGCGCCTCCGATGGAAGTG
GCGCTGTTGAAACAAACGGAGCGGGAAGTAAGTATT
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