mRNA_E_fasciculatus_S2_contig863.16751.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB36_ECTSI) HSP 1 Score: 321 bits (822), Expect = 4.370e-105 Identity = 213/306 (69.61%), Postives = 229/306 (74.84%), Query Frame = 1
Query: 1 MSPLMFAAEKGSSSVVKILLKYGASVSIKENSGFTALHLSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADPQLQRTATSGNTCVPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVML-TDAGVVDTGGALIAAADYGGVVSVKHLLQRQRHTSAERKAYVNTPGLFGATPLLWSIQACRPCSSRIARLLIDAGADTISTVAMADVLASGRMAYTPMEITMRRIRRKKVEGTQDI 915
MSPLMFAAEKGS SVVKILLKYGA+VSIKEN GFTALHLS+Q XXXXXXXXXXXXXXXXXXXXXXXXXXX K DPQLQ+ TSGN VPL++LA RGD+DAVREL RHVDI+GCGGPSRGV+AL AARDKHVDI+V+L TDAGVVDTGGALI AA YGGVVSV+HLLQRQ+ T+AERKAYVN PGLFGATPLLWSIQACRPCSSRIARLL+DAGADT STV MADV G MAYTP EI +RRIRRKKVEG +DI
Sbjct: 1 MSPLMFAAEKGSCSVVKILLKYGANVSIKENGGFTALHLSAQHGHPALTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLIASTQGYKDASKVLLRA-----------------------KVDPQLQQN-TSGNLFVPLNMLATRGDSDAVRELFRHVDIDGCGGPSRGVNALVTAARDKHVDIMVLLLTDAGVVDTGGALITAAHYGGVVSVEHLLQRQKQTAAERKAYVNAPGLFGATPLLWSIQACRPCSSRIARLLVDAGADTTSTVTMADVQGFGLMAYTPKEIAIRRIRRKKVEGKEDI 282
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 202 bits (514), Expect = 1.210e-57 Identity = 121/240 (50.42%), Postives = 155/240 (64.58%), Query Frame = 1
Query: 364 KADPQLQRTAT-SGNTCVPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAGVVDTGGALIAAADYGGVVSVKHLLQRQR-HTSAERKAYVNTPGLFGATPLLWSIQACRPCSSRIARLLIDAGADTISTVAMADVLASGRMAYTPMEITMRRIRRK-KVEGTQDITDEQLRSVEAIRRLLFQVEAVHAISWLWPGNNPSVAHAAGGGTGRTSASIVAV 1074
KADP L SG T +PLD A G + V ELIR V I+GCGG S GV AL AA+ K+++I+V+LT+AGVVDTG AL+ AA YGG +K LL++ R + + AYVNT G TPLLW IQ RP R+ RLL++AGADT S VA+ + L ++ TP+ +TM +R K KV G + EQL +EAIRRLL +VEAVHA+SWLWP + ++ AA GT RT+A AV
Sbjct: 171 KADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRP---RVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAV 407
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 183 bits (465), Expect = 2.830e-50 Identity = 109/238 (45.80%), Postives = 146/238 (61.34%), Query Frame = 1
Query: 364 KADPQLQRTATSGNT-CVPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAGVVDTGGALIAAADYGGVVSVKHLLQRQR-HTSAERKAYVNTPGLFGATPLLWSIQACRPCSSRIARLLIDAGADTISTVAMADVLASGRMAYTPMEITMRRIRRKKVEGTQDITDEQLRSVEAIRRLLFQVEAVHAISWLWPGNNPSVAHAAGGGTGRTSASIVA 1071
KADP L + SG +PLD+ A+ G + V ELIR V I+GCGG S G +AL AA +DI+ +LTDAGVVDTG AL+ AA YGG +K LL++ R S +R AY+NT G T LL IQ CRP R+ +LL++AGADT S V + + TP+ +TM + + + +T E+ +E IRRLL + EAVHA+SWLWP + P++ HA GTGRT+A+ A
Sbjct: 171 KADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRP---RVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR---SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTA 402
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: EsV-1-1 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.330e-46 Identity = 137/348 (39.37%), Postives = 177/348 (50.86%), Query Frame = 1
Query: 4 SPLMFAAEKGSSSVVKILLKYGASVSIKENSGFTALHL--SSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADPQLQRTATSGNTC-VPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAGVVDTGGALIAAADYGGVVSVKHLLQRQRHTSAE---RKAYVNTPGLFGATPLLWSIQACRPCSSRIARLLIDAGADTISTVAMADVLASGRMAYTPMEITMRRIRRKKVEGTQDITDEQLRSVEAIRRLLFQVEAVHAISWLWPGNNPSVAHA 1029
+PLM A G S + K+L+K GA+VSI + GFTALH + + XXXXXXXXXXXXX A+P L +T+ GNT VPLD+ A+ G TD VRELI+ + IEGC S G AL AA ++H+DI+ +LT+AGVVDTG AL AA G SVK LL R RH AY+N + G TPL+ Q C + RI R+L+DAGADT S V + ++ TP+ T R+R+K V + T E L+ +EAI RLL +V+AVHA+SWLWP P + A
Sbjct: 141 TPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLL-RHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRA 487
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 163 bits (413), Expect = 4.930e-43 Identity = 106/229 (46.29%), Postives = 140/229 (61.14%), Query Frame = 1
Query: 391 ATSGNTCVPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAGVVDTGGALIAAADYGGVVSVKHLLQRQRHTSAERKAYVN-TPGLFGATPLLWSIQACRPCSSRIARLLIDAGADTISTVAMADVLASGRMAY---TPMEITMRRIRRKKVEGTQDITDEQLRSVEAIRRLLFQVEAVHAISWLWPGNNPSVAHAAGGGTGRTSASI 1065
A SG T VPLD+ + G ++ VREL + + GCGG S GV++L A ++ VDI+ +LT GVVDTG AL+ AA+ SVK LLQ Q A YVN T FG TPL+ +I+AC S RIAR LIDA ADT STV V SG+ TP+ +R+ KV G ++ T+EQLRS++AI RLL QV+AVHA+SWLW ++ ++A G + R +I
Sbjct: 165 APSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVL---VTKSGQWTTSRDTPLGFATHSLRQNKV-GRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTI 386
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: EsV-1-199 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 163 bits (413), Expect = 7.540e-43 Identity = 106/242 (43.80%), Postives = 151/242 (62.40%), Query Frame = 1
Query: 364 KADPQLQRTATSGNTCVPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAG-VVDTGGALIAAADYGGVVSVKHLLQRQRHTSAERKAYVN-TPGLFGATPLLWSIQ--ACRPCSSRIARLLIDAGADTISTVAMADVLASG-RMAYTPMEITMRRIRRKKVEGTQDITDEQLRSVEAIRRLLFQVEAVHAISWLWP-GNNPSVAHAAGGGTGRTSASIVA 1071
KA+P L G + VPL++ A G+ D RE+IR V I GCGGPS GV+AL AA ++H++ + +L DAG VVDTG ALI AA+ G V+VK LL+R++ A+ AYVN T +G TP++ ++ A R CS +I RLL+DAGA+T V + + + + TP+ T R +R +V+G + T EQL+ ++ R LL + EAVHA+SWLW G P +A AAG T+++ VA
Sbjct: 168 KANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQ---ADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDG-EAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVA 405
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 163 bits (413), Expect = 7.990e-43 Identity = 101/210 (48.10%), Postives = 134/210 (63.81%), Query Frame = 1
Query: 433 RRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAGVVDTGGALIAAADYGGVVSVKHLLQRQRHTSAERKAYVN-TPGLFGATPLLWSIQACRPCSSRIARLLIDAGADTISTVAMADVLASGRMAY---TPMEITMRRIRRKKVEGTQDITDEQLRSVEAIRRLLFQVEAVHAISWLWPGNNPSVAHAAGGGTGR 1050
+ G ++ VRELI+ + + GCGG S GV++L AA +++VDI+ +LT GVVDTG AL+ AA+Y SVK LLQ H + YVN T FG TPL+ +I+AC S RIAR LID GADT STV V SG TP+ R +R+ KV G ++ T+EQLRS++AI RLL Q+EAVHA+SWLW ++ + HA G + R
Sbjct: 189 QHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQ---HQAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVL---VTRSGEWTTSRDTPLGFATRSLRQNKVGG-KNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSR 391
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: EsV-1-199 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.370e-39 Identity = 103/221 (46.61%), Postives = 125/221 (56.56%), Query Frame = 1
Query: 367 ADPQLQRTATS-GNTC-VPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAGVVDTGGALIAAADYGGVVSVKHLL-QRQRHTSAERKAYVNTPGLFGATPLLWSIQACRPCSSRIARLLIDAGADTISTVAMADVLASGRMAYTPMEITMRRIRRKKVEGTQDITDEQLRSVEAIRRLLFQVEAVHAISWLWPGNNPSV 1020
ADP L S G C +PLD+ + VREL++ + IE CGG SRGVDAL A +HV IV ML AGVVD G AL AAA G SVK LL Q + SA R AYVN FG TPLL +I C CS+RI RLL+DAGADT + + A T + + KK +G T E+ +++A RLL QVEA HAISW+WP + SV
Sbjct: 172 ADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLTPLLENI-TCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGD---TGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSV 388
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 154 bits (389), Expect = 2.500e-39 Identity = 99/228 (43.42%), Postives = 132/228 (57.89%), Query Frame = 1
Query: 364 KADPQLQRTATSGNTCVPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAGVVDTGGALIAAADYGGVVSVKHLLQRQRHTSAERKAYVNTP-GLFGATPLLWSIQAC--RPCSSRIARLLIDAGADTISTVAMADVLASGRMAYTPMEITMRRIRRKKVEGTQDITDEQLRSVEAIRRLLFQVEAVHAISWLWPGNNPSVAHAAGG 1038
KA+P L R + +PLD A+ G V EL++ I GCGG + GV AL AA H+D+++ LT AGVVDTG AL+ A +G + VK LLQ+Q T +E+ AYV+ P G TPL+ +I + CS ++ RLL+DAGADT S V + + TP+ + +R K + + I DE LR +E IRRLL +VEAVHA SWLW P V AGG
Sbjct: 170 KANPLLTRVNLAWQH-LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIK-IAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGG 395
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 154 bits (388), Expect = 2.650e-39 Identity = 99/215 (46.05%), Postives = 129/215 (60.00%), Query Frame = 1
Query: 373 PQLQRTATSGNTCVPLDILARRGDTDAVRELIRHVDIEGCGGPSRGVDALTPAARDKHVDIVVMLTDAGVVDTGGALIAAADYGGVVSVKHLLQRQRHTSAERKAYVNTP-GLFGATPLLWSIQACRPCSSRIARLLIDAGADTISTVAMADVLASGRMA-YTPMEITMRRIRRKKVEGTQDI-TDEQLRSVEAIRRLLFQVEAVHAISWLWPGN 1008
P L +SGNT VPLD A G REL++ I GC G S GVDAL AA D+H+D++ +L DAGVVDTG AL+A G ++K LL+++ +A R Y +TP G TPLL ++ PCS R+ RLL+DAGAD V + D GR YTP++ R + K V+ +D T +QLR++ A RRLL QVE VHA SWLW G+
Sbjct: 170 PLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTA-RTTYASTPRDGRGHTPLLSAVTT-GPCSPRVVRLLVDAGADATLAVRVPD--GFGRSTKYTPLDCATRCLAEKVVD--EDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGH 378 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig863.16751.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig863.16751.1 >prot_E_fasciculatus_S2_contig863.16751.1 ID=prot_E_fasciculatus_S2_contig863.16751.1|Name=mRNA_E_fasciculatus_S2_contig863.16751.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=360bp MSPLMFAAEKGSSSVVKILLKYGASVSIKENSGFTALHLSSQHGHPAVTRback to top mRNA from alignment at E_fasciculatus_S2_contig863:10926..12005- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig863.16751.1 ID=mRNA_E_fasciculatus_S2_contig863.16751.1|Name=mRNA_E_fasciculatus_S2_contig863.16751.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1080bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig863:10926..12005- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig863:10926..12005- >mRNA_E_fasciculatus_S2_contig863.16751.1 ID=mRNA_E_fasciculatus_S2_contig863.16751.1|Name=mRNA_E_fasciculatus_S2_contig863.16751.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1080bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig863:10926..12005- (Ectocarpus fasciculatus EfasUO2)back to top |