prot_E_fasciculatus_S2_contig863.16750.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig863.16750.1
Unique Nameprot_E_fasciculatus_S2_contig863.16750.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length277
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig863.16750.1 vs. uniprot
Match: D8LB37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB37_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 4.350e-188
Identity = 266/276 (96.38%), Postives = 270/276 (97.83%), Query Frame = 0 
Query:    1 MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQGTETEDDHERRTTTHREAALSGYVRSPARCGFYDEFGAIDEGRLAGLIPQGQRLAGYFVVRKGGSTRPSLRELEVFRGMVASSPASGQLPVLFVACLRLRDGAPTQSFQYQCLTAQGGVGGPQGTGRLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGVKGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVLLNRGGS 276
            MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQGTETEDDHERR TTHREAALSGYVRSPARCGFYDEFGAIDEGRLA LIPQGQRLAGYFVV KGGSTRPSLRE+EVFRGMVASS ASGQLPVL VACLRLRDGAPTQSFQYQCLTAQGGVGGPQG GRLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGV+GAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVL+NRGG+
Sbjct:    1 MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQGTETEDDHERRATTHREAALSGYVRSPARCGFYDEFGAIDEGRLALLIPQGQRLAGYFVVHKGGSTRPSLREIEVFRGMVASSSASGQLPVLLVACLRLRDGAPTQSFQYQCLTAQGGVGGPQGAGRLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGVEGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVLMNRGGT 276
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BLAST of mRNA_E_fasciculatus_S2_contig863.16750.1 vs. uniprot
Match: A0A835Z179_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z179_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.020e-44
Identity = 99/276 (35.87%), Postives = 149/276 (53.99%), Query Frame = 0 
Query:    2 YSLDGVALSGSLLASLLNEAASPYAGSEPR-KGTRYTDGLLFGSVNRRQGTETEDDHERRTTTHREAALSGYVRSPARCGFYDEFGAIDEGRLAGLIPQGQRLAGYFVVRKGGSTRPSLRELEVFRGMVASSPASGQLPVLFVACLRLRDGAPTQSFQYQCLTAQGGVGGPQGTGRLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGVKGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVLLNRGGS 276
            + +D V+  G LL SL +EA    A + PR     Y +GLL GS  RR  + T D+HE  T    E  L  ++ +  RC FYD  G + + +L G   Q +R AG+FVVR+GG  RPSLRELEV+R M A  P      VL +  + +  G+ TQSF+Y CL           +G+L+ LPCR+ NL  DS+ ++G   P+P+ P  V  A++  L +A+    PP++ + E L    + ++++ + E+   E  V +LQ E   ++  L   GG+
Sbjct:    1 FDVDAVSFPGPLLVSLFHEAG---AAATPRCPCLSYKEGLLVGSCTRRMVSSTADNHEAETKAQHELVLQQFITTGGRCSFYDGLGGVAQEKLKGATKQLERWAGFFVVRRGGGMRPSLRELEVYRNMRAL-PGVPHSFVLLLLTITIAPGSNTQSFKYYCLAED-------LSGKLKPLPCRVRNLLHDSATDFGRFYPTPLPPDLVSKAKECGLTDAYSGDMPPHLVQQEDLFKATMTSLQEALQEVAAAEARVRQLQAEEASLQEAL---GGT 262
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig863.16750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB37_ECTSI4.350e-18896.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z179_9STRA1.020e-4435.87Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
NoneNo IPR availablePANTHERPTHR31728:SF5coord: 5..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..276
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
IPR023238FAM175 familyPRINTSPR02051PROTEINF175coord: 80..99
score: 28.1
coord: 105..121
score: 30.81
coord: 181..195
score: 32.7
coord: 9..27
score: 27.82
IPR023238FAM175 familyPANTHERPTHR31728FAMILY NOT NAMEDcoord: 5..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig863contigE_fasciculatus_S2_contig863:3039..7516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig863.16750.1mRNA_E_fasciculatus_S2_contig863.16750.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig863 2991..9091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig863.16750.1 ID=prot_E_fasciculatus_S2_contig863.16750.1|Name=mRNA_E_fasciculatus_S2_contig863.16750.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=277bp
MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQG
TETEDDHERRTTTHREAALSGYVRSPARCGFYDEFGAIDEGRLAGLIPQG
QRLAGYFVVRKGGSTRPSLRELEVFRGMVASSPASGQLPVLFVACLRLRD
GAPTQSFQYQCLTAQGGVGGPQGTGRLEVLPCRINNLTMDSSAEYGHVRP
SPVVPLGVKGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELK
LVENTVVRLQLENRCMERVLLNRGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023238FAM175