mRNA_E_fasciculatus_S2_contig8624.16748.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI52_ECTSI) HSP 1 Score: 175 bits (443), Expect = 7.820e-53 Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 3
Query: 294 AHHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
AHHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRL+IKDQPVWGLTQEERELVKVAREKVNSC
Sbjct: 64 AHHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLKIKDQPVWGLTQEERELVKVAREKVNSC 156
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHU4_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.160e-24 Identity = 52/92 (56.52%), Postives = 71/92 (77.17%), Query Frame = 3
Query: 297 HHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
HHRPEA+A+ +DI RL+ M+ V ME EL + + ++ R+IE+K +KK LSSP M+ELL RLEI+ +PVWGLTQ+ER+LV+ AR KVN+C
Sbjct: 61 HHRPEAVASQEDIERLKAVMEDVMGMESELAK-ANSLNARTIEIKGNLKKTLSSPAMMELLNRLEIQSEPVWGLTQKERDLVRSARRKVNTC 151
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z526_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 6.960e-20 Identity = 48/92 (52.17%), Postives = 62/92 (67.39%), Query Frame = 3
Query: 297 HHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
HHRPEA+AA++DI RL A+ ++ +IE+KS +KK LSSP M+ELL RLEI +PVWGLTQ ERE+V+ AR KVN+C
Sbjct: 35 HHRPEAVAALEDIARL-SAIXXXXXXXXXXXXXXXTLNAHTIEIKSTLKKTLSSPAMIELLNRLEINAEPVWGLTQAEREMVRTARRKVNTC 125
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV18_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.800e-18 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 3
Query: 300 HRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
HRPEA+A DI+ LR M+ V E+E++L R D++ + I +KSAIKK+ S M ELL RLE+K QPVWGL+ ER+LVK AR + NSC
Sbjct: 74 HRPEAVAHAADIKSLRMLMEEVEELEVQL-RSADELP-KQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 162
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IEF3_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.030e-16 Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 294 AHHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
+ HRPE A +D+ +L M V +E L + +V+ RSIEL+ +IKK ++SP +++ L RLEI+ +PVWGLT EER+LVK AR KVN C
Sbjct: 65 SEHRPEMQAIAEDVTKLSSIMGEVETLE-HLLQSETEVTSRSIELRGSIKKLMTSPDVMDCLNRLEIQGEPVWGLTVEERDLVKFARSKVNEC 156
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K9H6_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.030e-16 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 3
Query: 303 RPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDK----VSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
RPE +A D+ +++ MQ V +E L R ++ ++GRSIEL+S+IKK + +P E L RLEI+ PVWGL+ EER+L+ AREKVN C
Sbjct: 63 RPEMLALAADVTKIQAVMQEVETLESLLDREKEESKGEITGRSIELRSSIKKLMVAPEFTECLNRLEIQGSPVWGLSSEERDLIHAAREKVNEC 156
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R7N6_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.940e-16 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 3
Query: 294 AHHRPEAIAAVDDIRRLREAMQHVSEMEIELGRL----GDKVSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
AHH PEAI + DIR L + M V+ +E +L G V+ +SIELK+AIK+++SS M +LL RLEI P WGL+ +ER+LV +AR+K N+C
Sbjct: 85 AHH-PEAIVELQDIRLLEQVMSEVATLEDQLATSMATHGSSVNEQSIELKAAIKRKMSSKAMAQLLDRLEINGTPRWGLSTKERKLVNLARDKFNAC 180
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Uncharacterized (protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRA7_FISSO) HSP 1 Score: 79.0 bits (193), Expect = 3.150e-15 Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 3
Query: 303 RPEAIAAVDDIRRLREAMQHVSEMEIEL-GRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
R IA D+ ++ + M V +E +L G V+ +SIELKSAIKK ++ P++LE L RLE++ QPVWGL+ EERE++ +AREKVN+C
Sbjct: 69 RGRMIALSQDVEKIEQVMTAVESLESQLLDNAG--VNSKSIELKSAIKKLMTDPSVLESLNRLELEGQPVWGLSTEEREMIIMAREKVNAC 157
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8IU12_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 4.260e-15 Identity = 40/95 (42.11%), Postives = 63/95 (66.32%), Query Frame = 3
Query: 303 RPEAIAAVDDIRRLREAMQHVSEME----IELGRLGDKV-SGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
RPE +A D++ + M V ++E E+ GD SG+SIEL+ +IKK ++ P ++E L RLE++ +PVWGL+ ER+L+++AR+KVN C
Sbjct: 7 RPEMLALAADVQHIVSVMNEVDKLEGILEREIEECGDSAPSGKSIELRGSIKKVMADPKVIECLDRLEVQGEPVWGLSSSERDLIQMARQKVNDC 101
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9H6B1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 7.440e-15 Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = 3
Query: 294 AHHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDK----VSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQPVWGLTQEERELVKVAREKVNSC 572
+ HRPE +A D++ + M V +E L ++ ++ RSIEL+ +IKK ++SP ++E L RLEI+ +PVWGL+ +ER+LVK+AR K+N C
Sbjct: 69 SEHRPEMLALAADVQTISSIMVEVEMLENLLQSETEENQGAITSRSIELRGSIKKLMTSPDVMECLNRLEIQGEPVWGLSSDERDLVKLARSKINEC 165 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8624.16748.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8624.16748.1 >prot_E_fasciculatus_S2_contig8624.16748.1 ID=prot_E_fasciculatus_S2_contig8624.16748.1|Name=mRNA_E_fasciculatus_S2_contig8624.16748.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=74bp MQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLEIKDQback to top mRNA from alignment at E_fasciculatus_S2_contig8624:228..1488+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8624.16748.1 ID=mRNA_E_fasciculatus_S2_contig8624.16748.1|Name=mRNA_E_fasciculatus_S2_contig8624.16748.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1261bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8624:228..1488+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8624:228..1488+ >mRNA_E_fasciculatus_S2_contig8624.16748.1 ID=mRNA_E_fasciculatus_S2_contig8624.16748.1|Name=mRNA_E_fasciculatus_S2_contig8624.16748.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=222bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8624:228..1488+ (Ectocarpus fasciculatus EfasUO2)back to top |