mRNA_E_fasciculatus_S2_contig8622.16747.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8622.16747.1
Unique NamemRNA_E_fasciculatus_S2_contig8622.16747.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 510 bits (1314), Expect = 8.950e-175
Identity = 291/454 (64.10%), Postives = 311/454 (68.50%), Query Frame = 1
Query:   43 QVLASITEPLLDVLLNPEKTISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRLNDSLDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDGSRDAVDILRGHPSFKGSINGGTISDLQKAGVTTLLPFGPGGGFPGIRAQGTTDAXXXXXXXAPGSEEGSEDGDDADEGEQRAPVATEEPGLLAGVELDSFLHATENGPGKISSLCEVDGKQIHKQRALTEFVGNEFRNASTDRLKRVRDYTAGPSGSSTGSRGVGKRGGEAAGIDNTDSRGIVVGDPFAMLVATPGRSPAQYALGLFSCTKAPSEEQAQDGA-VVKGRLMKLQWSSVAPAIAADRLEVGDGTPSSDIGEDGTPATGSWQHWGELGLHKGELSC 1401
            QVLASITEPLLDVLLN E+ ISELLRGLARVAFLLLFVYR  KTRF PGQL HDLQA IR LFYVVLEA+VRCP  +LYLWMIGTDGLENLFA+VRTLTHASNVDAKEAIERFGA IGVEQV                                                   DAVDILRGHPS++ S+N  TIS+LQK GVTT LPFG                                    A EG             LAG ELD+FLHATE+GPG+I+S CEVDGKQIHKQRALTEF+G  F+NAS DRLKR+R YTAG SGS+TGSRGVG RG EAAGI NTDSRGIVVGDPFAMLVATPG  PAQYALGLFSCTKAP +EQAQDG+ V KGRLMKLQ S VAPA+ A RL  GDGT SSD GEDG PA  SWQHWG+LGLHKGELSC
Sbjct:   33 QVLASITEPLLDVLLNSEEKISELLRGLARVAFLLLFVYRMKKTRFKPGQLDHDLQATIRLLFYVVLEAQVRCPRERLYLWMIGTDGLENLFAIVRTLTHASNVDAKEAIERFGAVIGVEQV---------------------------------------------------DAVDILRGHPSYEASVNRETISELQKVGVTTFLPFG------------------------------------ATEG-------------LAGGELDAFLHATESGPGEITSSCEVDGKQIHKQRALTEFMGPAFQNASRDRLKRLRGYTAGQSGSATGSRGVGGRGEEAAGIGNTDSRGIVVGDPFAMLVATPGMRPAQYALGLFSCTKAPMDEQAQDGSPVFKGRLMKLQRSKVAPAVGAVRLGEGDGTSSSDFGEDGAPAKDSWQHWGDLGLHKGELSC 386          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Reverse (transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.530e-79
Identity = 165/294 (56.12%), Postives = 183/294 (62.24%), Query Frame = 1
Query:  232 YVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRLNDSLDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDGSRDAVDILRGHPSFKGSINGGTISDLQKAGVTTLLPFGPGGGFPGIRAQGTTDAXXXXXXXAPGSEEGSEDGDDADEGEQRAPVATEEPGLLAGVELDSFLHATENGPGKISSLCEVDGKQIHKQRALTEFVGNEFRNASTDRLKRVRDYTAGPSGSSTGSRGVGKRGGEAAGIDNTDSRGIVVGD 1113
            Y  LEAKVRCP  +LYLW+IGTD LENLFA+V TLTHASNVDAKEAIERF AAI VE+V                                                   DAVDILRGH S K S++  TIS+LQK GVTT + FG                            EGSED DDA EGEQ AP  TE+   LAGV+LD+FLHATENGPG+ISS  EVDGKQIHKQRALTEF+G  F+NAS DRLKRVR YTAGPSGS+TGSRGVG++G EAAG+ NTDSRGIVVGD
Sbjct:  859 YFQLEAKVRCPRERLYLWVIGTDELENLFAIVHTLTHASNVDAKEAIERFRAAIEVEKV---------------------------------------------------DAVDILRGHSSCKASVDRETISELQKVGVTTFVSFGG---------------------------EGSEDEDDAGEGEQSAPATTEDAEGLAGVDLDAFLHATENGPGEISSFYEVDGKQIHKQRALTEFLGPAFQNASRDRLKRVRGYTAGPSGSATGSRGVGRKGVEAAGVGNTDSRGIVVGD 1074          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X4_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.580e-42
Identity = 108/301 (35.88%), Postives = 158/301 (52.49%), Query Frame = 1
Query:   43 QVLASITEPLLDVLLNPEKTISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRLNDSLDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDGSRDAVDILRGHPSFKGSINGGTISDLQKAGVTTLLPFGPGGGFPGIRAQGTTDAXXXXXXXAPGSEEGSEDGDDADEGEQRAPVATEEPGLLAGVELDSFLHATENGPGKISSLCEVDGKQIHKQRALTE 945
            ++L  I + LL +L    + ++ +L GLA VA L L +YRAN+ +F P QLYHD+Q  +R+ +++V  AK  CP+  L+ + +GTD LE LFA VRT TH  N D      RF +A  + ++Y+KHP W++ S+RL  S D  NT  W + G   NT V  VD+R CW +G   AV  L  HP + G ++  T  +LQ AG+T   P   G   PG+ ++            A  +EE SE        EQ   V   +PG     ++DS      NGP +   L     +  +++RA +E
Sbjct:  566 KILVIINKHLLAMLFENMRGVASILAGLACVAHLSLLLYRANRMKFFPAQLYHDMQTIVRSAYFLVAIAKHVCPEDPLFFFQLGTDRLEQLFAFVRTTTHDRNCDMLLLALRFASAYQLAKIYDKHPSWRRPSKRLEGSEDAMNTLSWME-GAEGNTRVDGVDLRECWVNGREKAVGALFAHPHYNGKVDLDTFRNLQNAGITMFKPL-DGNTMPGVSSKEDALDENDESGEANQAEEKSEQAV-----EQDXSVPANQPGEEKSEQVDSA-----NGPVRGGGLQMESERSDNRRRAESE 854          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Rhizoctonia solani AG-8 WAC10335 TaxID=1287689 RepID=A0A066W3Y0_9AGAM)

HSP 1 Score: 119 bits (297), Expect = 9.120e-25
Identity = 97/338 (28.70%), Postives = 152/338 (44.97%), Query Frame = 1
Query:   37 LQQVLASITEPLLDVLLNPEKTISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAA--IGVEQVYEKHPRWKKLSRRLNDS----LDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDGSRDAVDILRGHPSFKGSINGGTISDLQKAGV----TTLLPFGPGGGFPGIRAQGTTDAXXXXXXXAPGSEEGSEDGDDADEGEQRAPVATEE-PGLLAGVELDSFLHATENGPGKISSLCEVDGKQIHKQRALTEFVGNEFRNASTDRLKRVRDYTAGP 1017
            L Q + S   P  D+ L+    +SE L  L++   LL  +YR N+++F+ GQLY+D+Q+ I++  + V + K+  P    YL   G D LEN FA  RT++H  N+D  +  +   +A  I  + VY ++P   +   RL+ +    +DHTN R W       +  V +VD+ + W  G ++AV  L+           G   D ++A +    T +    P G + GI     +         A  +    +D   A         ATE+     A  E+D  L       G      EVDG  +H Q  +   +G +    STDRL+RVR Y+  P
Sbjct:  497 LGQFIDSFVRPFTDLSLS----LSEQLVLLSKCGHLLFVLYRLNRSQFMSGQLYYDIQSSIKSAHFCVAKTKILDPHAPFYLLQCGDDRLENRFATFRTMSHDRNMDLLQLADHSASAQHISADPVYVRNPDLNQTPYRLSATGSTGIDHTNPRSW-----TGDVSVANVDMNATWSQGRQEAVKALQ---------RAGIDFDFEQAALSASDTPIDLMRPFGAYVGINESNISSEDNVSATPAHSNPTSDDDPAAACNNASEPTPATEDLSDAKANTEIDRKL-------GDKIGWMEVDGHSVHLQSTVKIMLGQDGGQKSTDRLRRVRSYSKDP 809          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA62_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 6.370e-24
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   43 QVLASITEPLLDVLLNPEKTISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEA 249
            QVLASITEPLLDVLL PEKTISELLR LARVAFLLLFVYR NKTRFIP QLYHDLQA IR LFYVVL++
Sbjct:  270 QVLASITEPLLDVLLTPEKTISELLRELARVAFLLLFVYRMNKTRFIPDQLYHDLQATIRVLFYVVLKS 338          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Rhizoctonia solani AG-8 WAC10335 TaxID=1287689 RepID=A0A066V8D5_9AGAM)

HSP 1 Score: 110 bits (274), Expect = 4.160e-22
Identity = 58/169 (34.32%), Postives = 89/169 (52.66%), Query Frame = 1
Query:   88 NPEKTISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRLN----DSLDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDGSRDAVDILR 582
            +P  ++SE +  L++   LL  +YR N T+F+PGQL++D+QA I+   + V + ++  P++  YL   GTD LEN F   RT T   N D  +  ER      ++Q++  HPRW +   RL+      +DHTN   W       N  VG  D+ +CW  G   A  +L+
Sbjct:  409 DPTLSLSEQITSLSKCGHLLYSLYRINGTKFLPGQLFYDIQASIKNAVFCVAKTQLISPNLPFYLLQTGTDRLENRFGTYRTTTSDRNGDLLQMSERAAGVQLIDQIFADHPRWNRTPYRLSLDGRSGVDHTNPASW-----TGNVTVGKTDLYACWLHGQSQAAGLLK 572          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MDA1_9AGAM)

HSP 1 Score: 103 bits (258), Expect = 4.900e-22
Identity = 58/155 (37.42%), Postives = 82/155 (52.90%), Query Frame = 1
Query:  103 ISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRLND----SLDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDG 555
            +SE L  L+  A L   +Y  N + F+P QLYHD+ A I+ +F+ V + K+  PD   YL ++GTD LE LF+ VRT+TH  N D  + IER  AA  +  +  KHP W     +L        DH N R W     + + +VG V + + W  G
Sbjct:   63 LSEQLESLSCRAHLTFALYSINGSAFMPPQLYHDIMATIKNIFFCVAKQKILDPDAPFYLCLVGTDRLEILFSTVRTMTHDRNADFLQLIERIAAAFDITIILCKHPDWSSGHHQLKSLTDAGADHINPRSW-----LGDVKVGGVSLHAAWTGG 212          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3AJ99_9AGAM)

HSP 1 Score: 108 bits (271), Expect = 1.580e-21
Identity = 88/315 (27.94%), Postives = 138/315 (43.81%), Query Frame = 1
Query:   88 NPEKTISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRLNDS----LDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDGSRDAVDIL-RGHPSFKGSINGGTISDLQKAGVTTLLPFGPGGGFPGIRAQGTTDAXXXXXXXAPGSEEGSEDGDDADEGEQRAPVATEEPGLLAGVELDSFLHATENGPGKISSLCEVDGKQIHKQRALTEFVGNEFRNASTDRLKRVRDYTAGP 1017
            N   ++SE L  L++   LL  +Y  N++ F+ GQLY+D+Q  I+  ++ V + KV  P +  YL +   D LE+ F   RT+ H SN+   +  +R  AA  V+ +Y +HP   +   RL+ +     DHTN R W       +  V +VD+R+ W +G   A  +L R   +F   +   T+       +  + PFG   G    + +  T         AP S         A E      + TE  G             T+  P K     +++G  +H Q       G +  + STDRL+RVR Y+  P
Sbjct:  453 NLALSLSEQLTLLSKCGHLLFALYCLNRSNFMSGQLYYDIQTSIKNAYFCVAKTKVLDPSLPFYLLLCRDDRLESRFGTFRTMNHDSNMSLLQLCKRSAAAQHVDHIYARHPDLNRAPYRLSATGSAGTDHTNPRSW-----TGDVLVANVDLRAVWLEGRNLATRVLSRAGVNFDFDL---TVKAFPDKTIDLMRPFGEYIGLQEEQIKPFTHNQPSQCSEAPAS------ATSAAETHSEDNMPTETKG-----------DNTKPTPSK-KGWIDIEGHSVHLQSVAKVLFGRDGAHKSTDRLRRVRGYSKDP 741          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: uncharacterized (protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=UPI001F8B2135)

HSP 1 Score: 108 bits (269), Expect = 3.450e-21
Identity = 91/326 (27.91%), Postives = 140/326 (42.94%), Query Frame = 1
Query:   70 LLDVLLNPEKTISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRLN----DSLDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDGSRDAVDILRGHPSFKGSINGGTISDLQKAGVTTLLPFGPGGGFPGIRAQGTTDAXXXXXXXA-----PGSEEGSEDGDDADEGEQRAP--VATEEPGLLAGVELDSFLHATENGPGKISSLCEVDG---KQIHKQRALTEFVGNEFRNASTDRLKRVRDY 1005
            LLD  ++P  ++SE L  L+  A     +Y  + + F+  QLY D+QA I+A+F  V   ++       Y++ +G+D LE LFA VRT +H  N D  +  ER   +  + Q+Y +HP W +  RR +    + +DH N R +  +  V N     V + + W  G   A   L  H      I       L + GV  + P G    +PG+ +     A       A     P S  G   G  A E +   P  V      LL+  + D  +  +E       ++   DG   K++HK   ++          S DRL+RVR Y
Sbjct:  764 LLDPFIDPTLSLSEQLTRLSTFAHAAFILYLKHGSAFMSNQLYSDIQALIKAIFVCVARQQLLDGSKPFYIYQVGSDRLEELFAEVRTQSHDRNCDMAQLAERLSISANIVQIYNRHPEWNRGQRRRSFTGREGVDHVNPRFFQGDMVVKN-----VQLETVWHSGLIAAEKTLHTH-----GIYANFNDKLSRPGVDFMKPRGDT--YPGVSSDPDRSAAASTGVNAEPHAPPTSSRGQPTGPCAHEDQLADPDLVNMGLGDLLSSPDADGNIQTSEERDTDWLAVPNEDGSDPKELHKASIVSALFNPAGGRLSVDRLRRVRGY 1077          
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9V9W7_SPHS4)

HSP 1 Score: 98.2 bits (243), Expect = 8.940e-20
Identity = 60/173 (34.68%), Postives = 90/173 (52.02%), Query Frame = 1
Query:   49 LASITEPLLDVLLNPEKTISELLRGLARVAFLLLFVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTDGLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRLN----DSLDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDG 555
            L +I + L+ +  +   T++  L+ L+  + L L     + T FI GQLYHD+QA I+ +F+ V +  +  P    YL  +G D LEN+F  V TLTH  NVDA +  +   AA  +  +  +HP W +  RRL     D +DH N   W   G V     G+V ++ CW+ G
Sbjct:   64 LGAILKALIQLFTDLTMTLTHQLKSLSMTSHLCLAQMFMHGTAFISGQLYHDVQAMIKNVFFCVAKQCLLNPLSGFYLCQVGDDRLENVFGTVCTLTHDRNVDALQLSDHLAAAGEITSILSEHPEWDRGHRRLKLEGADGVDHVNPASW--KGDV---ITGNVSIQHCWDKG 231          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8622.16747.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized8.950e-17564.10protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Reverse1.530e-7956.12transcriptase Ty1/copia-type domain-containing pro... [more]
Uncharacterized3.580e-4235.88protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized9.120e-2528.70protein (Fragment) n=1 Tax=Rhizoctonia solani AG-8... [more]
Uncharacterized6.370e-2488.41protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.160e-2234.32protein (Fragment) n=1 Tax=Rhizoctonia solani AG-8... [more]
Uncharacterized4.900e-2237.42protein (Fragment) n=1 Tax=Botryobasidium botryosu... [more]
Hypothetical1.580e-2127.94protein n=1 Tax=Rhizoctonia solani TaxID=456999 Re... [more]
uncharacterized3.450e-2127.91protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID... [more]
Uncharacterized8.940e-2034.68protein (Fragment) n=1 Tax=Sphaerobolus stellatus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8622contigE_fasciculatus_S2_contig8622:4872..6561 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score171.8
Seed ortholog evalue7.6e-40
Seed eggNOG ortholog2880.D7G3X4
Model size1401
Hectar predicted targeting categorysignal peptide
Exons2
EggNOG OGs2DMFT@1,2S64X@2759
Cds size1401
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842520.537919-CDS-E_fasciculatus_S2_contig8622:4871..55391696842520.537919-CDS-E_fasciculatus_S2_contig8622:4871..5539Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8622 4872..5539 +
1696842520.5484235-CDS-E_fasciculatus_S2_contig8622:5828..65611696842520.5484235-CDS-E_fasciculatus_S2_contig8622:5828..6561Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8622 5829..6561 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8622.16747.1prot_E_fasciculatus_S2_contig8622.16747.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8622 4872..6561 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8622.16747.1

>prot_E_fasciculatus_S2_contig8622.16747.1 ID=prot_E_fasciculatus_S2_contig8622.16747.1|Name=mRNA_E_fasciculatus_S2_contig8622.16747.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=467bp
PLPLAIPVSLFPLQQVLASITEPLLDVLLNPEKTISELLRGLARVAFLLL
FVYRANKTRFIPGQLYHDLQAPIRALFYVVLEAKVRCPDMKLYLWMIGTD
GLENLFALVRTLTHASNVDAKEAIERFGAAIGVEQVYEKHPRWKKLSRRL
NDSLDHTNTRHWDDNGPVNNTEVGDVDVRSCWEDGSRDAVDILRGHPSFK
GSINGGTISDLQKAGVTTLLPFGPGGGFPGIRAQGTTDARAQGTTDAPGS
EEGSEDGDDADEGEQRAPVATEEPGLLAGVELDSFLHATENGPGKISSLC
EVDGKQIHKQRALTEFVGNEFRNASTDRLKRVRDYTAGPSGSSTGSRGVG
KRGGEAAGIDNTDSRGIVVGDPFAMLVATPGRSPAQYALGLFSCTKAPSE
EQAQDGAVVKGRLMKLQWSSVAPAIAADRLEVGDGTPSSDIGEDGTPATG
SWQHWGELGLHKGELSC
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mRNA from alignment at E_fasciculatus_S2_contig8622:4872..6561+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8622.16747.1 ID=mRNA_E_fasciculatus_S2_contig8622.16747.1|Name=mRNA_E_fasciculatus_S2_contig8622.16747.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1690bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8622:4872..6561+ (Ectocarpus fasciculatus EfasUO2)
CCCTTGCCCCTTGCCATACCCGTATCATTGTTCCCTCTCCAACAGGTTCT CGCGTCCATCACTGAGCCCCTGCTGGATGTGCTGCTGAACCCCGAGAAGA CGATCTCCGAGCTTCTCCGAGGGTTGGCTCGGGTCGCCTTCCTGCTCCTG TTTGTGTACAGGGCGAACAAGACACGCTTCATACCGGGACAGCTCTATCA CGATCTGCAGGCACCCATCAGGGCTCTGTTTTACGTGGTGCTCGAGGCAA AAGTCCGTTGCCCTGACATGAAGCTGTACCTTTGGATGATTGGGACTGAT GGGCTAGAAAACCTGTTCGCGCTTGTTCGCACCTTGACGCACGCCTCGAA CGTGGACGCGAAGGAGGCGATCGAGCGTTTCGGCGCGGCGATCGGGGTGG AGCAAGTATACGAGAAGCACCCGCGGTGGAAAAAACTTTCCAGGCGCCTC AACGACTCACTCGACCACACCAACACTCGCCATTGGGACGACAACGGCCC AGTGAACAACACCGAAGTTGGAGACGTGGACGTGCGGTCATGCTGGGAGG ATGGGAGCAGAGACGCCGTTGACATACTGCGGGGGCACCCTTCCTTCAAG GGTTCGATCAACGGGGGCACCATCTCAGACCTGCAGAAGGCTGGCGTCAC GACGCTCTTGCCTTTCGGGTAAGCCAAGAGGTGGAAGTATTCTTATGATT GCGTGATACCTTAGCACAAGAAGACGAAAAAGGTTCGGTGCTTGGCTCGG TGCTTGTGATAACCGTAGCATGCCGAAAGAGCGGGAATGTCATATAACGC TGTCAGTGTGCACTGAAAGCAGCCACAAGTTTGTTTCCATGTCAAACCGC TGTGCTTCATTGGAAAGTTATCACGTGTGCTAAAACCTCATAACATAACG CATGCTGCGGTTGCATATTTGGCTGTCCCGAATGCGCTGGTCTCGTTTGT GTGGAAGACCGGGTGGAGGGTTTCCGGGCATTCGGGCACAAGGAACGACT GATGCCCGGGCACAAGGAACGACTGATGCCCCGGGCAGTGAGGAGGGTTC TGAGGACGGGGACGACGCAGATGAAGGAGAGCAGCGCGCACCCGTAGCCA CGGAGGAGCCTGGACTCCTGGCGGGGGTTGAGCTAGATTCCTTCCTTCAC GCCACCGAAAATGGGCCTGGCAAGATATCGTCCTTGTGCGAGGTCGATGG TAAGCAGATTCACAAGCAGCGAGCTTTGACGGAGTTCGTGGGCAACGAGT TCCGGAATGCGTCGACAGACCGGCTGAAGCGCGTGCGAGACTACACGGCG GGGCCATCGGGATCTAGTACCGGCTCACGCGGTGTCGGAAAGAGGGGGGG GGAGGCAGCCGGCATTGACAACACCGATTCGCGAGGAATTGTTGTAGGGG ACCCGTTTGCTATGTTGGTAGCGACCCCGGGAAGGAGCCCAGCCCAGTAC GCCCTGGGCTTGTTCTCTTGCACGAAGGCCCCATCGGAGGAGCAGGCGCA AGATGGGGCTGTTGTCAAGGGTAGATTGATGAAGCTGCAATGGTCCAGTG TGGCGCCTGCTATTGCTGCAGATCGGCTGGAAGTGGGCGACGGAACTCCC TCTTCAGATATCGGTGAGGACGGTACGCCAGCTACGGGCTCGTGGCAACA CTGGGGAGAACTGGGACTCCACAAAGGGGAGCTATCGTGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8622:4872..6561+

>mRNA_E_fasciculatus_S2_contig8622.16747.1 ID=mRNA_E_fasciculatus_S2_contig8622.16747.1|Name=mRNA_E_fasciculatus_S2_contig8622.16747.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1401bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8622:4872..6561+ (Ectocarpus fasciculatus EfasUO2)
CCCTTGCCCCTTGCCATACCCGTATCATTGTTCCCTCTCCAACAGGTTCT
CGCGTCCATCACTGAGCCCCTGCTGGATGTGCTGCTGAACCCCGAGAAGA
CGATCTCCGAGCTTCTCCGAGGGTTGGCTCGGGTCGCCTTCCTGCTCCTG
TTTGTGTACAGGGCGAACAAGACACGCTTCATACCGGGACAGCTCTATCA
CGATCTGCAGGCACCCATCAGGGCTCTGTTTTACGTGGTGCTCGAGGCAA
AAGTCCGTTGCCCTGACATGAAGCTGTACCTTTGGATGATTGGGACTGAT
GGGCTAGAAAACCTGTTCGCGCTTGTTCGCACCTTGACGCACGCCTCGAA
CGTGGACGCGAAGGAGGCGATCGAGCGTTTCGGCGCGGCGATCGGGGTGG
AGCAAGTATACGAGAAGCACCCGCGGTGGAAAAAACTTTCCAGGCGCCTC
AACGACTCACTCGACCACACCAACACTCGCCATTGGGACGACAACGGCCC
AGTGAACAACACCGAAGTTGGAGACGTGGACGTGCGGTCATGCTGGGAGG
ATGGGAGCAGAGACGCCGTTGACATACTGCGGGGGCACCCTTCCTTCAAG
GGTTCGATCAACGGGGGCACCATCTCAGACCTGCAGAAGGCTGGCGTCAC
GACGCTCTTGCCTTTCGGACCGGGTGGAGGGTTTCCGGGCATTCGGGCAC
AAGGAACGACTGATGCCCGGGCACAAGGAACGACTGATGCCCCGGGCAGT
GAGGAGGGTTCTGAGGACGGGGACGACGCAGATGAAGGAGAGCAGCGCGC
ACCCGTAGCCACGGAGGAGCCTGGACTCCTGGCGGGGGTTGAGCTAGATT
CCTTCCTTCACGCCACCGAAAATGGGCCTGGCAAGATATCGTCCTTGTGC
GAGGTCGATGGTAAGCAGATTCACAAGCAGCGAGCTTTGACGGAGTTCGT
GGGCAACGAGTTCCGGAATGCGTCGACAGACCGGCTGAAGCGCGTGCGAG
ACTACACGGCGGGGCCATCGGGATCTAGTACCGGCTCACGCGGTGTCGGA
AAGAGGGGGGGGGAGGCAGCCGGCATTGACAACACCGATTCGCGAGGAAT
TGTTGTAGGGGACCCGTTTGCTATGTTGGTAGCGACCCCGGGAAGGAGCC
CAGCCCAGTACGCCCTGGGCTTGTTCTCTTGCACGAAGGCCCCATCGGAG
GAGCAGGCGCAAGATGGGGCTGTTGTCAAGGGTAGATTGATGAAGCTGCA
ATGGTCCAGTGTGGCGCCTGCTATTGCTGCAGATCGGCTGGAAGTGGGCG
ACGGAACTCCCTCTTCAGATATCGGTGAGGACGGTACGCCAGCTACGGGC
TCGTGGCAACACTGGGGAGAACTGGGACTCCACAAAGGGGAGCTATCGTG
C
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