mRNA_E_fasciculatus_S2_contig8621.16746.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8621.16746.1
Unique NamemRNA_E_fasciculatus_S2_contig8621.16746.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE0_ECTSI)

HSP 1 Score: 513 bits (1322), Expect = 1.790e-182
Identity = 268/280 (95.71%), Postives = 273/280 (97.50%), Query Frame = 1 
Query:    4 MDEERKVISDDFARQLSPETALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPDNSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETK-HFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGKIPRAPFAAPEGTPESVA 840
            MDE RKVISDDFARQLSPETALPVAAIKTLIGVIRRSTNTTIRGMEAELK+AIQLMEDKMETDSPDNSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGH+FVRDGTVVLTHGYSRCALHLLLMAAETK   +  + EGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHME+ADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGKIPRAPFAAPEGTPESVA
Sbjct:    1 MDEGRKVISDDFARQLSPETALPVAAIKTLIGVIRRSTNTTIRGMEAELKEAIQLMEDKMETDSPDNSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHNFVRDGTVVLTHGYSRCALHLLLMAAETKVTLACSLREGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEMADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGKIPRAPFAAPEGTPESVA 280
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BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA3_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.760e-102
Identity = 160/261 (61.30%), Postives = 203/261 (77.78%), Query Frame = 1 
Query:   13 ERKVISDDFARQLSPETALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPDNSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGKIP 795
            + + +  +F + L PET LPVAAIK LIGVI RS  +TI GME EL+    L+ D +      +++STI+L+SGC+LFLR+V+R    S+    F E CK+Q+LHRGE+FAE+S TSR +IA LGH FVRDG V++THGYSR    LLL AA+TKHF++++ EGRP+GAGF+AAA  SK G+PV+V+LDSAVGY ME  DLCV GAEGV+ENGG+VNKVGT QMAV+AKA + PFYVAAESYKFARL+PL+QRDLP+G+ P
Sbjct:   14 QEQAVVQEFLQMLGPETTLPVAAIKVLIGVIARSNASTIMGMERELRQTADLLLDSVVL----HAKSTIALSSGCELFLRYVTRC---SLDFPNF-EDCKKQVLHRGEKFAEMSVTSRVRIAELGHGFVRDGAVIMTHGYSRVVASLLLRAAQTKHFTIMIPEGRPEGAGFEAAAVFSKAGIPVSVILDSAVGYFMEQVDLCVVGAEGVVENGGVVNKVGTCQMAVVAKALHKPFYVAAESYKFARLYPLNQRDLPEGRTP 266
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BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R713_SAPDV)

HSP 1 Score: 261 bits (668), Expect = 3.660e-83
Identity = 138/257 (53.70%), Postives = 185/257 (71.98%), Query Frame = 1 
Query:   19 KVISDDFARQLSPETALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPDNSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGK 789
            KV+ D  A    P++A+ VA IK L GV++RS+ +T+  +E+ L +A   ++   +  +P  + S+IS+T+ CQLFLR+V+R   E    + FD+ CK QL+ RG+ FAE S  SR++IA LGH+FVRDG  VLTHG SR    LLL AA+TKHFSVLV EGRP+GAG+K A  LSK G+P TV++D+A+GY+ME  D+ + GAEGV+ENGGIVNK+GTF  A++A A   PFYVAAESYKFARL+PL+Q D P  +
Sbjct:    4 KVVDDFLAYLQDPDSAIAVAVIKALTGVVQRSSASTMMEIESALTEAAAQLKAAADGPAPTQALSSISVTAVCQLFLRYVTRCFLEF---DDFDQ-CKSQLIDRGKLFAETSLLSRKRIADLGHNFVRDGMQVLTHGASRVVTGLLLQAAKTKHFSVLVTEGRPNGAGYKTAEVLSKAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSAAMIAHAMKKPFYVAAESYKFARLYPLNQSDFPHSR 256
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BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSA6_9STRA)

HSP 1 Score: 259 bits (661), Expect = 6.270e-82
Identity = 139/255 (54.51%), Postives = 182/255 (71.37%), Query Frame = 1 
Query:   55 PETALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPD-------------NSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLP 780
            P++A+ VA IK L GVI+RS  +T+  +E+ L+DA   ++    +  P              ++ S IS+T+GCQLFLR+V+R   E    + FD+ CK QL+ RG+ FAE S TSR++IA LGH+FVRDG VVLTHG SR    LLL AA+TKHFSV+V EGRP+GAG+K A  LS  G+P TV++D+A+GY+ME AD+ + GAEGV+ENGGIVNK+GTF  A++AK  N PFYVAAESYKFARL+PL+Q D P
Sbjct:   15 PDSAVAVAVIKVLTGVIKRSKASTMMEIESALQDAASQLKSAATSYPPQTDGAKKPVHSTSAHTLSPISVTAGCQLFLRYVTRCFLEF---DDFDQ-CKAQLIDRGKLFAETSSTSRKRIADLGHNFVRDGMVVLTHGASRVVTKLLLQAAQTKHFSVVVTEGRPNGAGYKTAEHLSNAGIPTTVIVDAAMGYYMERADMVIVGAEGVVENGGIVNKIGTFSCAMIAKTMNTPFYVAAESYKFARLYPLNQSDFP 265
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=4 Tax=Aphanomyces TaxID=100860 RepID=W4GIQ1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.040e-79
Identity = 140/268 (52.24%), Postives = 185/268 (69.03%), Query Frame = 1 
Query:   25 ISDDFARQLS-PETALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSP-DN-----------SRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGK 789
            + D+F   L  PE+A+ VA IK L GVI+ S  +T+  ME+ L+DA   ++     +SP DN           S S+IS+T+GCQLFLR+V+R   E    + FD+ CK QL+ RG+ FAE S TSR++I   GH+FVRDG VVLTHG SR    +LL AA++KHFSV+V EGRP+GAG+K A  LS  G+P TV++D+A+GY+ME   + + GAEGV+ENGGIVNK+GTF  A++A A   PFYVAAESYKFARL+PL+Q D P  +
Sbjct:    8 VVDEFMGYLKDPESAIAVAVIKVLTGVIQHSEASTMMEMESALQDAASQLKAAAAANSPADNKNIATHSTSAQSLSSISVTAGCQLFLRYVTRCFLEF---DDFDQ-CKSQLIDRGKLFAETSSTSRKRIVDFGHNFVRDGMVVLTHGASRVVTKVLLQAAKSKHFSVVVTEGRPNGAGYKTAELLSNAGIPTTVIVDAAMGYYMERVSMVIVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESYKFARLYPLNQHDFPHSR 271
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BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EC59_TRICV)

HSP 1 Score: 254 bits (648), Expect = 4.250e-79
Identity = 138/243 (56.79%), Postives = 177/243 (72.84%), Query Frame = 1 
Query:   64 ALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPD----NSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLP 780
            ALPVAAIK+L+GVIRRS   T+ G++ EL++A   M     T SP       RSTI+L SGC+LF+++V+R   E+        +C   ++ RGERFA++S  +R++IA +G SFVRDG+VVLTHG+SR    +LL AAET+HFSV+V EGRPD AG KAA   +  G+P TVVLDSA+GY ME AD+ V GAEGV+ENGG+VNK+GT+ + V A+    PFYVAAESYKFARLFPL+QRDLP
Sbjct:   69 ALPVAAIKSLLGVIRRSEANTMMGLQEELREAGDAMMTYART-SPHALGLGGRSTIALASGCELFMKYVTRCFLEAPDFA----TCMANVVERGERFADISLAARDRIADVGRSFVRDGSVVLTHGWSRVVASILLKAAETRHFSVIVLEGRPDAAGAKAAKVYADAGIPTTVVLDSAMGYVMERADMVVVGAEGVVENGGVVNKMGTYALGVCARESGKPFYVAAESYKFARLFPLNQRDLP 306
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJE4_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.080e-78
Identity = 139/274 (50.73%), Postives = 185/274 (67.52%), Query Frame = 1 
Query:   16 RKVISDDFARQLS-PETALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPD---------------NSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGK 789
            R  + D+F   L  P++A+ VA IK L GVI+ +  +T+  +E+ L+DA   ++    T +P                 + S+IS+T+GCQLFLR+V+R   E    E FD+ CK QL+ RG+ FAE S  SR++IA LGH+FVRDG  VLTHG SR    LLL AA+TKHFSV+V EGRP+G+G+K A  LS  G+P TV++D+A+GY+ME  D+ V GAEGV+ENGGIVNK+GTF  A++A A   PFYVAAESYKFARL+PL+Q D P  +
Sbjct:    4 RSNVVDEFLGYLKDPDSAIAVAVIKVLTGVIQHTKASTMMEIESALRDAAAQLKAAASTLTPALASDKKAIALHSMSAQTLSSISVTAGCQLFLRYVTRCFLEF---EDFDQ-CKSQLIQRGKLFAETSSMSRKRIADLGHNFVRDGMQVLTHGASRVVTKLLLQAAQTKHFSVVVTEGRPNGSGYKTAELLSNAGIPTTVIVDAAMGYYMEKVDMVVVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESYKFARLYPLNQSDFPHNR 273
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD48_GLOUD)

HSP 1 Score: 249 bits (635), Expect = 3.860e-78
Identity = 137/262 (52.29%), Postives = 187/262 (71.37%), Query Frame = 1 
Query:   22 VISDDFARQLSP-ETALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPDNSR--STISLTSGCQLFLRHVSRFVAESVGEEGFD--ESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGKI 792
            ++  DF + LS  + A+ VA IK L GVI RS  +T+  ME+EL++A   ++   +TD   +SR  ++I+ T+GCQLFLR+V+R   E      FD  E CK QL+ RG  FAE S +SR++IA +GH+F+RDG  VLTHG SR  + LL  AA+TKHFSV + EGR +G+G + A  L++ G+P TV+LDSAVG++ME  D+ + GAEGV+ENGGIVN VGT+ MAV+A+A   PFYVAAESYKFARL+PL QRD+P+ ++
Sbjct:    9 IVVQDFLQYLSDADVAVAVAVIKALTGVIVRSEASTMMQMESELQEAAHQLK-TYQTDDSSSSRYQNSIATTAGCQLFLRYVTRCFLE------FDDFELCKSQLIDRGNFFAETSLSSRKRIAEVGHNFIRDGMRVLTHGASRVVIALLCEAAKTKHFSVFITEGRSNGSGLQTAEKLAETGIPTTVILDSAVGFYMEQTDMVIVGAEGVVENGGIVNSVGTYSMAVIAQALKKPFYVAAESYKFARLYPLTQRDVPQTQM 263
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIU5_9STRA)

HSP 1 Score: 246 bits (629), Expect = 4.490e-77
Identity = 132/252 (52.38%), Postives = 174/252 (69.05%), Query Frame = 1 
Query:   25 ISDDFARQLSPETALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPDNSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLP 780
            + D  +       ALPVAAIK+L+GVI+RS   T+ G++ EL  A   M D   TD    +RS I+L SGC++F+++V+R   E      FDE CK+Q+L RGERFA +S  +R++IA LG  F++DG  VL HG+SR    LL+ AA  K+F++++ EGRPD  G +AA   +  G+P TVVLDSA+GY ME  DL + GAEGV+ENGG+VNKVGTF + V+AK    PFYVAAESYKFARLFPL+Q+DLP
Sbjct:   16 LQDHLSSDSMQRMALPVAAIKSLLGVIKRSEANTMMGLQEELVIACNAMVDWASTDIALVNRSKIALASGCEMFVKYVTRCFLELPE---FDE-CKKQVLERGERFAGISLAARDRIAELGQEFIQDGQTVLVHGFSRVVSALLIKAAARKNFNIIILEGRPDAGGARAARVYNDAGIPCTVVLDSAMGYVMERVDLVIVGAEGVVENGGVVNKVGTFALGVVAKELGKPFYVAAESYKFARLFPLNQQDLP 263
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Match: eIF-2B (GDP-GTP exchange factor subunit alpha n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MKQ0_9STRA)

HSP 1 Score: 248 bits (634), Expect = 4.690e-77
Identity = 135/249 (54.22%), Postives = 178/249 (71.49%), Query Frame = 1 
Query:   64 ALPVAAIKTLIGVIRRSTNTTIRGMEAELKDAIQLMEDKMETDSPDNSR-----STISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGKIP 795
            ALPVAAIK+L+GV+RRS  +T+ G++ EL+ A   M D     +P  SR     S I+L SGC+LF+++V+R   E+     FD +C  Q+L RGERFA +S  +R++IA +GH FV+DG  VLTHG+SR    LL+ AAET+HFS++V EGRPD +G K+A   +  G+P TVVLDSAVGY ME AD+ V GAEGV+ENGGIVNK+GT+ + + A+    PFYVAAESYKFAR+FPL+Q DLP+   P
Sbjct:   57 ALPVAAIKSLLGVVRRSNASTMMGLQDELRSATDEMLD-FAMSAPGQSRLLGGRSHIALASGCELFMKYVTRAYLEAPD---FD-TCMAQVLERGERFAGISLAARDRIAEVGHPFVQDGQTVLTHGWSRVVSSLLIKAAETRHFSIVVLEGRPDASGAKSAKVYADAGIPTTVVLDSAVGYVMERADMVVVGAEGVVENGGIVNKMGTYALGMAARELGKPFYVAAESYKFARMFPLNQSDLPRMGAP 300
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8621.16746.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
eIF-2B1.790e-18295.71GDP-GTP exchange factor subunit alpha n=2 Tax=Ecto... [more]
eIF-2B1.760e-10261.30GDP-GTP exchange factor subunit alpha n=1 Tax=Trib... [more]
eIF-2B3.660e-8353.70GDP-GTP exchange factor subunit alpha n=2 Tax=Sapr... [more]
eIF-2B6.270e-8254.51GDP-GTP exchange factor subunit alpha n=1 Tax=Apha... [more]
eIF-2B1.040e-7952.24GDP-GTP exchange factor subunit alpha n=4 Tax=Apha... [more]
eIF-2B4.250e-7956.79GDP-GTP exchange factor subunit alpha n=1 Tax=Trie... [more]
eIF-2B1.080e-7850.73GDP-GTP exchange factor subunit alpha n=1 Tax=Apha... [more]
eIF-2B3.860e-7852.29GDP-GTP exchange factor subunit alpha n=1 Tax=Glob... [more]
eIF-2B4.490e-7752.38GDP-GTP exchange factor subunit alpha n=1 Tax=Lept... [more]
eIF-2B4.690e-7754.22GDP-GTP exchange factor subunit alpha n=1 Tax=Odon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8621contigE_fasciculatus_S2_contig8621:97..3933 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score514.2
Seed ortholog evalue3.8e-143
Seed eggNOG ortholog2880.D8LNE0
Preferred nameEIF2B1
Model size864
KEGG koko:K03239
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0002181,GO:0002183,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005085,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005850,GO:0005851,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0007417,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009605,GO:0009628,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009987,GO:0009991,GO:0010001,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0010646,GO:0010647,GO:0014003,GO:0016020,GO:0017076,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019899,GO:0021782,GO:0022008,GO:0023052,GO:0030154,GO:0030234,GO:0031323,GO:0031326,GO:0031667,GO:0032045,GO:0032091,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032268,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0034248,GO:0034284,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042063,GO:0042221,GO:0042594,GO:0042802,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043393,GO:0043434,GO:0043603,GO:0043604,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048709,GO:0048731,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050851,GO:0050852,GO:0050896,GO:0051020,GO:0051098,GO:0051099,GO:0051100,GO:0051171,GO:0051246,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1903832,GO:1903833,GO:1904424,GO:1905097,GO:1905098,GO:1990928,GO:2000112
Exons5
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG1184@1,KOG1466@2759
Ec32 ortholog descriptioneukaryotic translation initiation factor 2B alpha subunit
Ec32 orthologEc-04_004190.1
Cds size861
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8621.16746.1prot_E_fasciculatus_S2_contig8621.16746.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8621 97..3930 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842520.4571936-CDS-E_fasciculatus_S2_contig8621:96..2941696842520.4571936-CDS-E_fasciculatus_S2_contig8621:96..294Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8621 97..294 -
1696842520.4701505-CDS-E_fasciculatus_S2_contig8621:918..11071696842520.4701505-CDS-E_fasciculatus_S2_contig8621:918..1107Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8621 919..1107 -
1696842520.4805808-CDS-E_fasciculatus_S2_contig8621:1682..18301696842520.4805808-CDS-E_fasciculatus_S2_contig8621:1682..1830Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8621 1683..1830 -
1696842520.4928567-CDS-E_fasciculatus_S2_contig8621:2269..23891696842520.4928567-CDS-E_fasciculatus_S2_contig8621:2269..2389Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8621 2270..2389 -
1696842520.5009654-CDS-E_fasciculatus_S2_contig8621:3724..39301696842520.5009654-CDS-E_fasciculatus_S2_contig8621:3724..3930Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8621 3725..3930 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842520.5092382-UTR-E_fasciculatus_S2_contig8621:3930..39331696842520.5092382-UTR-E_fasciculatus_S2_contig8621:3930..3933Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8621 3931..3933 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8621.16746.1

>prot_E_fasciculatus_S2_contig8621.16746.1 ID=prot_E_fasciculatus_S2_contig8621.16746.1|Name=mRNA_E_fasciculatus_S2_contig8621.16746.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=287bp
MDEERKVISDDFARQLSPETALPVAAIKTLIGVIRRSTNTTIRGMEAELK
DAIQLMEDKMETDSPDNSRSTISLTSGCQLFLRHVSRFVAESVGEEGFDE
SCKQQLLHRGERFAEVSETSREQIARLGHSFVRDGTVVLTHGYSRCALHL
LLMAAETKHFSVLVAEGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHME
VADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARL
FPLDQRDLPKGKIPRAPFAAPEGTPESVAASRCVKA*
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mRNA from alignment at E_fasciculatus_S2_contig8621:97..3933-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8621.16746.1 ID=mRNA_E_fasciculatus_S2_contig8621.16746.1|Name=mRNA_E_fasciculatus_S2_contig8621.16746.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3837bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8621:97..3933- (Ectocarpus fasciculatus EfasUO2)
CACATGGACGAGGAAAGGAAGGTGATCTCGGATGACTTCGCGCGGCAGCT
CAGCCCGGAGACGGCGCTCCCCGTGGCGGCGATCAAGACCCTGATCGGCG
TCATCAGGCGGAGCACCAACACCACAATCCGCGGCATGGAGGCCGAGCTC
AAGGACGCGATCCAGCTCATGGAGGACAAGATGGAGACTGATAGCCCGGA
CAACAGCAGGTCAGAGAGAGAGAGAGAGAGAGAGACACACACACACAGGC
ACAGGCAAGGATGGTTTGCAATAAGCGAAGGCAACTAGGTGCTTGGGGTG
GCTCTGGGGTTGCTGCTGACGCTCTGTCTCTGTCCCCCTGCTGGCGCCTC
ACTGCTGTTGCGCGGGCGCCGCACCGTTTTCGCCAGACAACCATGCTCCT
TTCCATGTGGCTGCAATCCCCTGAAGCTGTCTTCCCCCTGCCGAGATAGG
CTTGCTGCATAGATCGCTCCATTGAACGCCTTTGCTGGTGTTTGCGGTTG
GCCTTTTGTTCGCATTGCTCTCTGTCCTGGTGTTGGAACACTGCGTCTAC
AACAGCAGTAGAAGTCCCCCTTGCGGTTTGAATTCGCGGTGCGCTGCCGC
TGCGAAAGGGGCCAGGATGGGTCAGCGCTCAGGGGGTTCATGCTCAGTGA
TATCATGCCTCGCCACCTTTGACCTTCTGGTGATTGTGGTGGCTGAGGAT
TGTGTTTTTGCGTTTACCAAGGGCTCGTTGTCATCCGAGCAACGGGGGAC
GTTGGTCGAATGCAGCTTCTGGTGACCTTGAGAGATTACGGCAACGTACC
GCATTGCAGCTCAAGATCACACACCCTTCACACAATACCCCAGCTGGCAC
AGCATTGTTGTGGTAGGCCGAAAGTATACTGCCAAAGTCATAGCTTACGG
ATCAACGTAATCCTACAAACAGAAAGGTTATCTCAGATCACGCAATAGGG
CGACAAAAGGTACCACACACACCCACACAAAAATAATACACACGATGATT
AATTGGTTGGGGGCCGAAATGTTGTCACCGGGATGTGGTACATGTAGTCT
CCGTGTAGACCGCATCATATGCGACGCAAGCCGTGAATCTACGTGGTTAG
GCCCAGACGCCAGCACCAGGATAAAGGGAGCGCAGGGGGCTACATGTGCA
ATCGAACCAAACCTTCTACTCGTGCCGTCTATCCGCACCGTTTTCTGTTT
GTAAGTAGCGGGGGCTATCGTGCATGAGACAAGCGTCACCCAACACACGA
CGCCCTTGCCGCCATCCTCCAACACCCACAGGCACGCCGCGTCGGGTCTA
GCTTGTTCCATCCCATTCATACAAACACAATCGAACGGCATGGGGTCAAC
CGAAATTGTGTAGGCGCTCAGAATGCGAGAGAGAAATATCTAAACAATCT
ACGCTGTAGATAACTCTCTCGCCTTACGAGCGCCCACACAAATTTCTGCA
TCCCCATATCTACAGTACACGCGTTATGTGTACACCCCCTATTCCGATGC
AATTCAACCGCACGCGACCGCGGCCTCTACCGCTGCTACCGCAGGAGCAC
GATATCTCTGACCAGCGGGTGCCAGTTGTTCCTCCGGCACGTATCTCGCT
TCGTCGCCGAGTCGGTCGGGGAGGAGGGCTTCGACGAGTCCTGCAAGCAG
CAATTGTTGCACAGGTGAGAGAGAGAGAGAGAGAGAGAACCGGCGGCTTC
GTAGACGAGATATGTACGTACATCCAGCAGCGCCACGTGCAGATCTTGTT
GATTTACGTATGGTATGCAGTATCTGTGCGCCAGTCGCTACGGAGGCAGC
CACGTGCAGCCACGTGCGGTGTGGGCCACGCATCAATTTTCTTGGGGCGG
GGAAAGGCAGTATTGTTGTCGTTGTCTGCTCCAAGACACGTTCCGCGGTT
ACATGGACCCCCAAGCCGACCCCCGTTGGTGGCAACAACAACGACAGCAA
TACTTGGACCCAGTCCGTTCACTTTTTGTTCAAGCCCAACACGAAAAACA
TTTTTCAAATTTCGGGCTTTACTTTCCTGGACCCCTAGCCAAACCCATCA
CCACTGCCACAGCAACAATCCCGCCCACCTCTTGTTTTTCCGTCCGAAAC
CAGGGGGGAACGATTCGCGGAAGTTTCCGAGACCAGTCGAGAACAGATCG
CGCGCCTGGGGCACAGCTTCGTTAGGGACGGAACGGTGGTGTTGACGCAC
GGCTACTCGCGGTGTGCTCTCCACCTCTTGCTCATGGCCGCGGAAACGAA
GGTGTGGCAGGCGGATGTGCAGAGCAGCTGACTGAAAGAATAGACAAGCA
AAGGACAGCACGTTCTGTTGTCAGTTAACAGAGAGCGGATGGACCCAGAT
AAGACAGTGCTCCCTTCTTCTTGTATGCGGTGGGGAGGTAATGTTGACTT
GGGTTGCGCGTAGGGTTGTGGAGCGCCCTTGACTGCCTCCTGCCTCCCGT
CTAGGGAGCTCTCTGTGCCACGCCACACGCTTCTGTCTCTACCGCCACCG
CCGACGCGGTTTGACACGAAACACACACGCACATTTTCATTGGTCAGCCG
GGTTAGCGTGGTCGATGCTATTAATGAAGACACGCACAATTGCGTCTTTC
TCTCTTGCAAGCACTACAGTGGGGAGGGCTGTCCAGTGCCGTTTATGCGC
CCAGGCACTATACCGGACACCGACACTATTCAAAGTCCAGGATGACTTGG
TGATTCCGTCTGTGCCACCCGAACAAACCGACACTACTGGGGGACGGGAA
CAGGCACTATTTACCCGGCACCTAAACACCCACCCACCTGCTGTACTGGA
AACGGTTGTTACTCGTCGTCGCGCAGCACTTTAGCGTGCTCGTTGCGGAG
GGGAGGCCGGACGGGGCGGGGTTCAAGGCCGCCGCCGCGCTCTCGAAGGT
TGGGGTCCCCGTGACGGTGGTTTTGGACTCCGCAGTGGGGTACCACATGG
AGGTGGCCGACTTGTGCGTGACGGGCGCGGAGGGGGTGTTGGAGAACGGG
GGAATCGTCAACAAGGTGGGCGCGCGCTTCTTTTTTTTTTTTTTCTTTGT
GTGTGGGTGGTTGTTGGGGGGGTGGTTGGGGGCATGTGTGTGCAAGTCGT
CCTTGTGTGCGGTATTCCGTCACACCACCCAACCAGCCACATCGGGTGTT
TATCTTATCAACCTCTTGGTGTTTGCCGTCGAGCACGGTGTTTTCACTGC
CGTTCAAAGGTTCAGACTGCATGAAGGTTTTGGCGTTGTCTTGTGGTGGG
AACGGGGGCGGAGGCTGCCCGTCACAGAGGAAGGGGGAGATGCGTGTGAC
AAGGCAAGGTGGACCGGAACGAGTTCCAAACCCTATATGCCCGTGCGGCT
TGTTGTGGTGTTGGCTAGCAGACGTGTCTGGCAAGCGCGAGCCGCCTGGA
GCAGCGGCATTGATCGTCTCCCGTGTACTTCGTAGCGGAAGACACAAAAG
TTGGCAGGTTCCTTCCCGATGGCGAGGGTAGGGACAGAAGAATCTTCGAA
GGAAACGAAATGAATGCTGTCTGCGTGGCTAAATAATCGCCAAAGATGTG
TTCGCGATTGCATGAACCTCTTTCTTGACCAGGATGACATTTCCCTTCTC
TCCCGAAAACAATCACCACGCCACACCACACAACGACAGGTTGGGACGTT
TCAGATGGCGGTACTGGCGAAGGCGTACAACGTCCCCTTCTATGTCGCAG
CGGAGAGCTACAAGTTCGCTCGCTTGTTCCCGCTCGACCAACGAGATCTC
CCCAAGGGCAAGATCCCGAGGGCGCCGTTCGCCGCGCCAGAGGGCACCCC
AGAAAGCGTCGCCGCGTCCAGGTGTGTAAAAGCTTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8621:97..3933-

>mRNA_E_fasciculatus_S2_contig8621.16746.1 ID=mRNA_E_fasciculatus_S2_contig8621.16746.1|Name=mRNA_E_fasciculatus_S2_contig8621.16746.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=861bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8621:97..3933- (Ectocarpus fasciculatus EfasUO2)
ATGGACGAGGAAAGGAAGGTGATCTCGGATGACTTCGCGCGGCAGCTCAG
CCCGGAGACGGCGCTCCCCGTGGCGGCGATCAAGACCCTGATCGGCGTCA
TCAGGCGGAGCACCAACACCACAATCCGCGGCATGGAGGCCGAGCTCAAG
GACGCGATCCAGCTCATGGAGGACAAGATGGAGACTGATAGCCCGGACAA
CAGCAGGAGCACGATATCTCTGACCAGCGGGTGCCAGTTGTTCCTCCGGC
ACGTATCTCGCTTCGTCGCCGAGTCGGTCGGGGAGGAGGGCTTCGACGAG
TCCTGCAAGCAGCAATTGTTGCACAGGGGGGAACGATTCGCGGAAGTTTC
CGAGACCAGTCGAGAACAGATCGCGCGCCTGGGGCACAGCTTCGTTAGGG
ACGGAACGGTGGTGTTGACGCACGGCTACTCGCGGTGTGCTCTCCACCTC
TTGCTCATGGCCGCGGAAACGAAGCACTTTAGCGTGCTCGTTGCGGAGGG
GAGGCCGGACGGGGCGGGGTTCAAGGCCGCCGCCGCGCTCTCGAAGGTTG
GGGTCCCCGTGACGGTGGTTTTGGACTCCGCAGTGGGGTACCACATGGAG
GTGGCCGACTTGTGCGTGACGGGCGCGGAGGGGGTGTTGGAGAACGGGGG
AATCGTCAACAAGGTTGGGACGTTTCAGATGGCGGTACTGGCGAAGGCGT
ACAACGTCCCCTTCTATGTCGCAGCGGAGAGCTACAAGTTCGCTCGCTTG
TTCCCGCTCGACCAACGAGATCTCCCCAAGGGCAAGATCCCGAGGGCGCC
GTTCGCCGCGCCAGAGGGCACCCCAGAAAGCGTCGCCGCGTCCAGGTGTG
TAAAAGCTTGA
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