prot_E_fasciculatus_S2_contig862.16743.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig862.16743.1
Unique Nameprot_E_fasciculatus_S2_contig862.16743.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length310
Homology
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: D8LHE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 2.620e-168
Identity = 241/311 (77.49%), Postives = 259/311 (83.28%), Query Frame = 0
Query:    1 GRPSLDLASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPNAAYLYKHNSNRSNSGKSGGSVGSPLGRDIFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTVTEIREQRNTLAGMGSASEASYDPKESFSNAPPSRGLRHIWKDPCQVCEAADRPEISXXXXXXXXXXXXXXRPLRARTGGGGGS-VQHAPPSFPLADIDPRSSLSLEARTPARIMR 310
            G+PSLDL SVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLD+MEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGP AAYLYKHN NRS+S +SGGSVGSPLGRDIFYWPDMPRTDA  N + +    W D  +A L + G+  LP +S NYDMDPSML SEDATERAVYQ+WY+LV+T+TEIREQ+N L GMGS  EASYD   SF NAPPSRG+RHIW D CQVCE+ADRPEIS              R L ARTGGGG S VQHAPPSFPLADIDPRS+LSLEARTPAR MR
Sbjct:    2 GKPSLDLVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDQMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYKHNGNRSHSTRSGGSVGSPLGRDIFYWPDMPRTDADGNEI-MDPSAWMD--VAQLMIVGVSSLPTVSANYDMDPSMLHSEDATERAVYQLWYTLVSTITEIREQQNPLVGMGSVPEASYDRNGSFCNAPPSRGVRHIWSDLCQVCESADRPEISPEIVQVTVPATVP-RALGARTGGGGSSSVQHAPPSFPLADIDPRSALSLEARTPARAMR 308          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: A0A6H5KEG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG2_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 2.060e-99
Identity = 166/233 (71.24%), Postives = 180/233 (77.25%), Query Frame = 0
Query:   79 SRCVFIHDPRIRGPNAAYLYKHNSNRSNSGKSGGSVGSPLGRDIFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTVTEIREQRNTLAGMGSASEASYDPKESFSNAPPSRGLRHIWKDPCQVCEAADRPEISXXXXXXXXXXXXXXRPLRARTGGGGG-SVQHAPPSFPLADIDPRSSLSLEARTPARIMR 310
            +RCVFIHDPRIRGP AAYLY H+  RS+S +SGGSVGSPLGRDIFYWPDMPRTDA  N                       +LP + VNYDMDPSML SEDATERAVYQ+WYSLV+T+TEI EQ +TL GMG ASEA YDP +   NAPPSRG RHIW+DPCQVCE+ADR EIS    XXXXXXXXX RPLRARTGGGG  SVQHAP SFPLADIDPRS+LSLEARTPAR MR
Sbjct:   19 ARCVFIHDPRIRGPTAAYLYNHHGKRSHSARSGGSVGSPLGRDIFYWPDMPRTDADGN-----------------------ELPTVLVNYDMDPSMLHSEDATERAVYQLWYSLVSTITEISEQPHTLVGMGRASEAPYDPSDLLFNAPPSRGRRHIWRDPCQVCESADRLEISPEIVXXXXXXXXX-RPLRARTGGGGSTSVQHAPSSFPLADIDPRSALSLEARTPARAMR 227          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: D7FIR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR3_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.630e-25
Identity = 72/214 (33.64%), Postives = 106/214 (49.53%), Query Frame = 0
Query:    1 GRPSLDLASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRG-----PNAAYLYKHNSNR--SNSGKSGGSVGS------PLGRD-----IFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTV 196
            G PS  +   NRKTE+CRN++ G C     +CAFAHG  +++ ++L ++E  GRI +ASK++   C TW+ TG C Y  RCVFIHD R++G     P  + L K  ++R  S++G  GG  G       P G D     + ++PD PR D  S                        +LPA  V YD+D  +  +        Y++WYS +  +
Sbjct:   27 GIPSSSIIEHNRKTELCRNYENGSCTFGD-RCAFAHGLDDIKHKTLRDLEKEGRIADASKYQACLCQTWVATGTCLYGRRCVFIHDDRVKGTIGLSPRTSTLAKSAASRISSSTGSRGGGSGRGSSPLCPAGEDNDNGSLLFFPDRPR-DPDSR-----------------------ELPADEVRYDIDFGVDVNTGRDHSTAYKLWYSFITVM 215          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: A0A836CEW5_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.760e-21
Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    7 LASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCL--TWITTGACPY 77
            +   NRKTE+CRNWQ G C+    KCAFAHG  EL  Q+L EME  GRIPNA++FR  PC+  TW+ TG+CPY
Sbjct:    4 VIEANRKTELCRNWQNGTCLYGG-KCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPY 75          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: A0A7S2PVK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PVK8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.260e-16
Identity = 45/90 (50.00%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    7 LASVNRKTEICRNWQQGRCVAEAW--KCAFAHGTHELR--RQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGP 92
            LA V  KTE+CR ++ G      W  KC +AHG HEL+    +L  ME +G+I NA  +   PC+TWI+TGACPY  RC  IHDP I GP
Sbjct:    7 LAKV--KTEMCRYYELGGLKNCPWGDKCNYAHGKHELKFNHTTLTLMERSGQIANAKTYLSRPCMTWISTGACPYGRRCPAIHDPSITGP 94          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: D7FXU2_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU2_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.350e-16
Identity = 53/144 (36.81%), Postives = 74/144 (51.39%), Query Frame = 0
Query:   67 LTWITTGACPYFSRCVFIHDPRIRGPNAAYLY--KHNSNRSNSGKSGGSVGSPLGRDIFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTVTEIREQRNTLAG 208
            +TW+ TG+CPY SRCVFIHDPR++G   A+LY   H S+  +S  S            F++PD+PR D  S                         LP  S  YD+DP+M  ++D  +RAVY MWYS V+ +T+I   +   +G
Sbjct:    1 MTWVATGSCPYSSRCVFIHDPRVQGRQEAWLYAGSHMSSAYHSSDS-----------AFFFPDLPR-DPDS------------------------LLPRDSSLYDLDPAMCAAKDRADRAVYNMWYSFVSVLTDIETDKAPPSG 108          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: A0A7S3Q9Y3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Y3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.840e-13
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    9 SVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRI 89
            S   KTE+CRN+   R      KC +AHG  EL+   L ++E  G + +   FR +PCLTW+ TGACP+ +RC+ +HDPR+
Sbjct:  419 SAKVKTELCRNFNTRRGCQFGDKCNYAHGAQELKLTKLMDLERAGLV-DIEIFRTHPCLTWVATGACPFDTRCIGLHDPRV 498          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: A0A835Z3W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.850e-12
Identity = 68/198 (34.34%), Postives = 87/198 (43.94%), Query Frame = 0
Query:   40 ELRRQSLDEME---------YTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPNAAY----------LYKHNSNRSNS----GKSGG---SVGSPLG------------RDIFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSE---DATERAVYQMWYSLVNTV 196
            ELR + L ++            GRIPNA+KFR YPCL           SRCVF+HDPR+R   A+           L    S+R+++    GK G    S G  LG            RD FYWPD+ R          ST        +S P R   +LPA    Y++  +M   +   D T  AVY +WYSLV TV
Sbjct:    9 ELRNRDLSQLADWLVRIRRAEAGRIPNATKFRSYPCL-----------SRCVFLHDPRLRSTPASRDVSGTTTPEALSTPASSRASTPLSTGKGGSRCESRGGVLGTGPSSGLGMRAARDFFYWPDVVREPIPEGEPSPSTST------SSAPRRA--KLPACEATYELSSAMADPDKTGDVTGAAVYHLWYSLVETV 187          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: K0T106_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T106_THAOC)

HSP 1 Score: 77.0 bits (188), Expect = 6.030e-12
Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    5 LDLASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQ--SLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRI 89
            + LA V  K+E+C+ +  G+      +C +AHG HEL+++  +L +ME +G+I NA  +   PC+TW++TG CP+  RC  IHDP +
Sbjct:  244 IRLAKV--KSELCQYYSSGQRCPFGDRCNYAHGKHELKQRHTTLLQMERSGQIVNAGAYLSRPCMTWVSTGCCPFGRRCTSIHDPLV 328          
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Match: A0A7S3Q3T8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3T8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 9.210e-12
Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    9 SVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPNAAYLYKH 100
            +   KTE+C+  QQGR  A   +C +AH  +EL+  ++ E     +I +   FR  PC  +++TGACP+ +RC  IHD  ++G ++AY+ KH
Sbjct:   25 AAKEKTEMCKTVQQGRYCAFGDRCKYAHNRNELKLTTVRERMNNKQISDGRTFRSRPCFDFLSTGACPFGTRCPNIHDEDMKGGHSAYI-KH 115          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LHE0_ECTSI2.620e-16877.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEG2_9PHAE2.060e-9971.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIR3_ECTSI1.630e-2533.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CEW5_9STRA3.760e-2158.90C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2PVK8_9STRA1.260e-1650.00Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
D7FXU2_ECTSI2.350e-1636.81C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S3Q9Y3_9STRA1.840e-1344.44Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A835Z3W2_9STRA1.850e-1234.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0T106_THAOC6.030e-1240.23Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3Q3T8_9STRA9.210e-1238.04Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 11..38
e-value: 1.3E-4
score: 31.3
coord: 60..87
e-value: 1.6
score: 14.6
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 65..88
score: 9.704
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 11..39
score: 11.047
NoneNo IPR availableGENE3D4.10.1000.10coord: 7..44
e-value: 2.5E-10
score: 41.6
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 11..199
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 10..42
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 58..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig862contigE_fasciculatus_S2_contig862:447..7458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig862.16743.1mRNA_E_fasciculatus_S2_contig862.16743.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig862 447..7458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig862.16743.1 ID=prot_E_fasciculatus_S2_contig862.16743.1|Name=mRNA_E_fasciculatus_S2_contig862.16743.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=310bp
GRPSLDLASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEME
YTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPNAAYLYKH
NSNRSNSGKSGGSVGSPLGRDIFYWPDMPRTDAGSNAVRISTFLWADAPL
ASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTVTEIR
EQRNTLAGMGSASEASYDPKESFSNAPPSRGLRHIWKDPCQVCEAADRPE
ISPEIVPPVTVPATVPRPLRARTGGGGGSVQHAPPSFPLADIDPRSSLSL
EARTPARIMR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR000571Znf_CCCH