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Homology
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI) HSP 1 Score: 488 bits (1257), Expect = 2.620e-168 Identity = 241/311 (77.49%), Postives = 259/311 (83.28%), Query Frame = 1
Query: 1 GRPSLDLASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPNAAYLYKHNSNRSNSGKSGGSVGSPLGRDIFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTVTEIREQRNTLAGMGSASEASYDPKESFSNAPPSRGLRHIWKDPCQVCEAADRPEISXXXXXXXXXXXXXXRPLRARTGGGGGS-VQHAPPSFPLADIDPRSSLSLEARTPARIMR 930
G+PSLDL SVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLD+MEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGP AAYLYKHN NRS+S +SGGSVGSPLGRDIFYWPDMPRTDA N + + W D +A L + G+ LP +S NYDMDPSML SEDATERAVYQ+WY+LV+T+TEIREQ+N L GMGS EASYD SF NAPPSRG+RHIW D CQVCE+ADRPEIS R L ARTGGGG S VQHAPPSFPLADIDPRS+LSLEARTPAR MR
Sbjct: 2 GKPSLDLVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDQMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYKHNGNRSHSTRSGGSVGSPLGRDIFYWPDMPRTDADGNEI-MDPSAWMD--VAQLMIVGVSSLPTVSANYDMDPSMLHSEDATERAVYQLWYTLVSTITEIREQQNPLVGMGSVPEASYDRNGSFCNAPPSRGVRHIWSDLCQVCESADRPEISPEIVQVTVPATVP-RALGARTGGGGSSSVQHAPPSFPLADIDPRSALSLEARTPARAMR 308
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG2_9PHAE) HSP 1 Score: 300 bits (769), Expect = 2.060e-99 Identity = 166/233 (71.24%), Postives = 180/233 (77.25%), Query Frame = 1
Query: 235 SRCVFIHDPRIRGPNAAYLYKHNSNRSNSGKSGGSVGSPLGRDIFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTVTEIREQRNTLAGMGSASEASYDPKESFSNAPPSRGLRHIWKDPCQVCEAADRPEISXXXXXXXXXXXXXXRPLRARTGGGGG-SVQHAPPSFPLADIDPRSSLSLEARTPARIMR 930
+RCVFIHDPRIRGP AAYLY H+ RS+S +SGGSVGSPLGRDIFYWPDMPRTDA N +LP + VNYDMDPSML SEDATERAVYQ+WYSLV+T+TEI EQ +TL GMG ASEA YDP + NAPPSRG RHIW+DPCQVCE+ADR EIS XXXXXXXXX RPLRARTGGGG SVQHAP SFPLADIDPRS+LSLEARTPAR MR
Sbjct: 19 ARCVFIHDPRIRGPTAAYLYNHHGKRSHSARSGGSVGSPLGRDIFYWPDMPRTDADGN-----------------------ELPTVLVNYDMDPSMLHSEDATERAVYQLWYSLVSTITEISEQPHTLVGMGRASEAPYDPSDLLFNAPPSRGRRHIWRDPCQVCESADRLEISPEIVXXXXXXXXX-RPLRARTGGGGSTSVQHAPSSFPLADIDPRSALSLEARTPARAMR 227
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR3_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.630e-25 Identity = 72/214 (33.64%), Postives = 106/214 (49.53%), Query Frame = 1
Query: 1 GRPSLDLASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRG-----PNAAYLYKHNSNR--SNSGKSGGSVGS------PLGRD-----IFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTV 588
G PS + NRKTE+CRN++ G C +CAFAHG +++ ++L ++E GRI +ASK++ C TW+ TG C Y RCVFIHD R++G P + L K ++R S++G GG G P G D + ++PD PR D S +LPA V YD+D + + Y++WYS + +
Sbjct: 27 GIPSSSIIEHNRKTELCRNYENGSCTFGD-RCAFAHGLDDIKHKTLRDLEKEGRIADASKYQACLCQTWVATGTCLYGRRCVFIHDDRVKGTIGLSPRTSTLAKSAASRISSSTGSRGGGSGRGSSPLCPAGEDNDNGSLLFFPDRPR-DPDSR-----------------------ELPADEVRYDIDFGVDVNTGRDHSTAYKLWYSFITVM 215
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: C3H1-type (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW5_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.760e-21 Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 19 LASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCL--TWITTGACPY 231
+ NRKTE+CRNWQ G C+ KCAFAHG EL Q+L EME GRIPNA++FR PC+ TW+ TG+CPY
Sbjct: 4 VIEANRKTELCRNWQNGTCLYGG-KCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPY 75
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PVK8_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.260e-16 Identity = 45/90 (50.00%), Postives = 56/90 (62.22%), Query Frame = 1
Query: 19 LASVNRKTEICRNWQQGRCVAEAW--KCAFAHGTHELR--RQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGP 276
LA V KTE+CR ++ G W KC +AHG HEL+ +L ME +G+I NA + PC+TWI+TGACPY RC IHDP I GP
Sbjct: 7 LAKV--KTEMCRYYELGGLKNCPWGDKCNYAHGKHELKFNHTTLTLMERSGQIANAKTYLSRPCMTWISTGACPYGRRCPAIHDPSITGP 94
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: C3H1-type (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU2_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 2.350e-16 Identity = 53/144 (36.81%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 199 LTWITTGACPYFSRCVFIHDPRIRGPNAAYLY--KHNSNRSNSGKSGGSVGSPLGRDIFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTVTEIREQRNTLAG 624
+TW+ TG+CPY SRCVFIHDPR++G A+LY H S+ +S S F++PD+PR D S LP S YD+DP+M ++D +RAVY MWYS V+ +T+I + +G
Sbjct: 1 MTWVATGSCPYSSRCVFIHDPRVQGRQEAWLYAGSHMSSAYHSSDS-----------AFFFPDLPR-DPDS------------------------LLPRDSSLYDLDPAMCAAKDRADRAVYNMWYSFVSVLTDIETDKAPPSG 108
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Y3_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.840e-13 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 25 SVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRI 267
S KTE+CRN+ R KC +AHG EL+ L ++E G + + FR +PCLTW+ TGACP+ +RC+ +HDPR+
Sbjct: 419 SAKVKTELCRNFNTRRGCQFGDKCNYAHGAQELKLTKLMDLERAGLV-DIEIFRTHPCLTWVATGACPFDTRCIGLHDPRV 498
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W2_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.850e-12 Identity = 68/198 (34.34%), Postives = 87/198 (43.94%), Query Frame = 1
Query: 118 ELRRQSLDEME---------YTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPNAAY----------LYKHNSNRSNS----GKSGG---SVGSPLG------------RDIFYWPDMPRTDAGSNAVRISTFLWADAPLASLPLRGLPQLPAISVNYDMDPSMLQSE---DATERAVYQMWYSLVNTV 588
ELR + L ++ GRIPNA+KFR YPCL SRCVF+HDPR+R A+ L S+R+++ GK G S G LG RD FYWPD+ R ST +S P R +LPA Y++ +M + D T AVY +WYSLV TV
Sbjct: 9 ELRNRDLSQLADWLVRIRRAEAGRIPNATKFRSYPCL-----------SRCVFLHDPRLRSTPASRDVSGTTTPEALSTPASSRASTPLSTGKGGSRCESRGGVLGTGPSSGLGMRAARDFFYWPDVVREPIPEGEPSPSTST------SSAPRRA--KLPACEATYELSSAMADPDKTGDVTGAAVYHLWYSLVETV 187
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T106_THAOC) HSP 1 Score: 77.0 bits (188), Expect = 6.030e-12 Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 13 LDLASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQ--SLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRI 267
+ LA V K+E+C+ + G+ +C +AHG HEL+++ +L +ME +G+I NA + PC+TW++TG CP+ RC IHDP +
Sbjct: 244 IRLAKV--KSELCQYYSSGQRCPFGDRCNYAHGKHELKQRHTTLLQMERSGQIVNAGAYLSRPCMTWVSTGCCPFGRRCTSIHDPLV 328
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3T8_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 9.210e-12 Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 25 SVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPNAAYLYKH 300
+ KTE+C+ QQGR A +C +AH +EL+ ++ E +I + FR PC +++TGACP+ +RC IHD ++G ++AY+ KH
Sbjct: 25 AAKEKTEMCKTVQQGRYCAFGDRCKYAHNRNELKLTTVRERMNNKQISDGRTFRSRPCFDFLSTGACPFGTRCPNIHDEDMKGGHSAYI-KH 115
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig862.16743.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
| Match Name | E-value | Identity | Description | |
|---|
| Uncharacterized | 2.620e-168 | 77.49 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 2.060e-99 | 71.24 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Uncharacterized | 1.630e-25 | 33.64 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| C3H1-type | 3.760e-21 | 58.90 | domain-containing protein n=1 Tax=Tribonema minus ... | [more] |
| Hypothetical | 1.260e-16 | 50.00 | protein (Fragment) n=1 Tax=Skeletonema marinoi Tax... | [more] |
| C3H1-type | 2.350e-16 | 36.81 | domain-containing protein n=2 Tax=Ectocarpus TaxID... | [more] |
| Hypothetical | 1.840e-13 | 44.44 | protein n=1 Tax=Chaetoceros debilis TaxID=122233 R... | [more] |
| Uncharacterized | 1.850e-12 | 34.34 | protein n=1 Tax=Tribonema minus TaxID=303371 RepID... | [more] |
| Uncharacterized | 6.030e-12 | 40.23 | protein n=1 Tax=Thalassiosira oceanica TaxID=15974... | [more] |
| Hypothetical | 9.210e-12 | 38.04 | protein (Fragment) n=1 Tax=Chaetoceros debilis Tax... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 493.8 |
| Seed ortholog evalue | 5.8e-137 |
| Seed eggNOG ortholog | 2880.D8LHE0 |
| Model size | 930 |
| KEGG ko | ko:K06236,ko:K18753 |
| KEGG Pathway | ko04151,ko04218,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04218,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005938,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0099568 |
| Exons | 9 |
| EggNOG free text desc. | 3'-UTR-mediated mRNA destabilization |
| EggNOG OGs | COG5063@1,KOG1677@2759 |
| Ec32 ortholog description | Zinc finger, CCCH-type |
| Ec32 ortholog | Ec-13_000470.1 |
| Cds size | 930 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00536,ko03019,ko04516 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842520.105929-CDS-E_fasciculatus_S2_contig862:446..685 | 1696842520.105929-CDS-E_fasciculatus_S2_contig862:446..685 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 447..685 - |
| 1696842520.120992-CDS-E_fasciculatus_S2_contig862:2630..2773 | 1696842520.120992-CDS-E_fasciculatus_S2_contig862:2630..2773 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 2631..2773 - |
| 1696842520.1321352-CDS-E_fasciculatus_S2_contig862:3496..3628 | 1696842520.1321352-CDS-E_fasciculatus_S2_contig862:3496..3628 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 3497..3628 - |
| 1696842520.1505702-CDS-E_fasciculatus_S2_contig862:4245..4422 | 1696842520.1505702-CDS-E_fasciculatus_S2_contig862:4245..4422 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 4246..4422 - |
| 1696842520.1664429-CDS-E_fasciculatus_S2_contig862:5219..5257 | 1696842520.1664429-CDS-E_fasciculatus_S2_contig862:5219..5257 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 5220..5257 - |
| 1696842520.1795402-CDS-E_fasciculatus_S2_contig862:5699..5754 | 1696842520.1795402-CDS-E_fasciculatus_S2_contig862:5699..5754 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 5700..5754 - |
| 1696842520.1908894-CDS-E_fasciculatus_S2_contig862:6435..6496 | 1696842520.1908894-CDS-E_fasciculatus_S2_contig862:6435..6496 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 6436..6496 - |
| 1696842520.2021258-CDS-E_fasciculatus_S2_contig862:6878..6924 | 1696842520.2021258-CDS-E_fasciculatus_S2_contig862:6878..6924 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 6879..6924 - |
| 1696842520.2133005-CDS-E_fasciculatus_S2_contig862:7419..7458 | 1696842520.2133005-CDS-E_fasciculatus_S2_contig862:7419..7458 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig862 7420..7458 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig862.16743.1 >prot_E_fasciculatus_S2_contig862.16743.1 ID=prot_E_fasciculatus_S2_contig862.16743.1|Name=mRNA_E_fasciculatus_S2_contig862.16743.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=310bp
GRPSLDLASVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEME
YTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPNAAYLYKH
NSNRSNSGKSGGSVGSPLGRDIFYWPDMPRTDAGSNAVRISTFLWADAPL
ASLPLRGLPQLPAISVNYDMDPSMLQSEDATERAVYQMWYSLVNTVTEIR
EQRNTLAGMGSASEASYDPKESFSNAPPSRGLRHIWKDPCQVCEAADRPE
ISPEIVPPVTVPATVPRPLRARTGGGGGSVQHAPPSFPLADIDPRSSLSL
EARTPARIMR back to topmRNA from alignment at E_fasciculatus_S2_contig862:447..7458- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig862.16743.1 ID=mRNA_E_fasciculatus_S2_contig862.16743.1|Name=mRNA_E_fasciculatus_S2_contig862.16743.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7012bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig862:447..7458- (Ectocarpus fasciculatus EfasUO2)
GGCAGACCTAGCCTGGACCTTGCGTCTGTCAACCGAAAGGTGAGCTATGA
CATCTGAGAATCACGGAGAAGGTCGCTGCTGCTTATGTCAGGAAGTCTCC
TTCTCTGGATTGACAAGCATTGCCTCAGTGTTTGAGTGAGAGACCATCAG
ACAAAATCGCGGGCGACTGGACCAGTGCGATGCGCTCAACAGGAGCAATG
ATATCACCCACGGATGGCACGGAGGAAGGTTGTTGGACTGTTCCTGTGAC
TATCTGGTTGCACTGTTGAAGCTGTTCAAGGGTGATGTTCAAATCCCATG
CTGTTCTCGCCATCTACACCTTACCTGTTGACTGCTGTTGCTGTGGCCTG
CTGTTGGTGCGGAAGGCTGTTGGTACTTGTGGCACCACAGCAGGCGGAGA
TGCTAGCGGCAGCCCCCATCCATCGCCTTCCTTCCTTTCATACCTTAGTG
CCAGCCATGATGTTGGCTCAACCGTTCACGTACTTTCGCCCTCTGCGTGT
GCGCATGCCGCCTATAATGCTCGGCCAACCCAAGACGGAGATATGCCGCA
ACTGGCAACAGGGTCGCTGCGTCGCTGAAGGTACATCTATGAACCGTACA
CTCTACTCAGTAACCCAGGGTGGTTGGTTTAAGGCCGTATACTTTATACA
AAGAGCGCGATCCCTTCATATCGACGTGTCGTTTTTGGCTTGTCCTACAC
CTATACTCGCCAAATCTAGGTATCAACTTGGCCTCAAGGCCCTGAAAAGG
TAGAACTGCGTCGTGGAATTCAAGCTCGATTCACTTTCTACGCTAGACGA
GTCAATCCGTCGGCTACGACCGCAGAATAAGATCAATCAACCGCATATTT
CCGCGCTACCGATATGAGGAAGAGCGTTCATGCTGCTGAACTACAAAATT
TAAACACATGTCCCACCTGTTGTTACACCCGTGTGGCCCTTGCGGGTGCA
CCTCGGAACCAGCTTGGAAGTGCGCCTTCGCCCACGGAACGCACGAGCTT
AGACGCCAGAGTCTCGACGAGATGTAAGTCAGAGTCTTCATGAGATGAAA
TTCATTGTCACAGGCGCGGTCGCACGTCAAGTCACAGCAGCTGAAGTTTC
CACATTTACCAGGACCAGTTTCAACGGTCATATGTCCGGAACATTCTAAT
GAGTGTGAGGGATGGATATCTCGCACCGCCCTCCCCGTCCATCAATCTAC
TCTGGAATGAACGATCATGGCCGCTTCCAACTCGCCCAGAGTGAAACCAG
AGCCAGGTGAACTGGGAGAAAGCCATTCACACCCTTCCTCCTGTCGGGAT
CAGCTCTCTACCGGGCGTGCAAGCTGAATTTCACTCGCTACCTCCCAAGC
CCGACCGGAGAATATCATATCGGATGTGCTGATTGTCGTACAATTAGCGC
TCGAACTCAAGAACCTCTAGTGTTGGGCGCGACTGGGGTTCCTGGTTGCT
GTAGGGTTTGGCTACATGAGACTACAAGTGAGCGCTGTACGTCGTCTAGC
GTACCGAACTCACAAATGGGGTTCAATTTCGTTGGGGCTAAGCATGAAGT
TCTTTTCACTGCCAAAGTCACTACATGCGACCACCAGTTCAAAATAAATT
TGTGGGCGCGAACTGTACACGATGTGGGTCGTGCCACGGCTGTGATCTTG
CACTCCTTGCTTTCAACCCCGTGCTTTTTGTGGCCATGTTCACTTTGATG
GCAGGGAGTACACGGGCCGGATCCCCAACGCCTCCAAGTTCCGATGCTAC
CCTTGCCTGGTGAGGGCTGGAGAGCCTGGGTGTGATTCGAGTGTGACTCC
CGGACGCTGGCCCCTAGTTGATCCTTCTGCAATTATCGTGGTGTCGAGCA
AGTCGAGGAGAATGCCTCATTCGTGCATGTCTAAAACCGTTCTGGTTCAA
TATGTACATGTACCATACCTTCACCGAAGGCGCCTACACACTATAGCTCT
TTCAATCGCCGGGCAGAGGCGAATGTCGCGTCCCCAAAACTGAAAATTGA
GAAATACCCAAAACGCAACCAACAGACCTACGTAATAATATGTGTATAGT
CTATAGTGGGTACCTTTTCATCAGTGGGTCCGCCGAAGGTCGCTACGAAA
CACGTTCGTGAAGTATACGGAATCTTCCCAAGGCCTCCCGCTGCCCATTC
ACTTACGTTCGCTGAACAATCTGTTGCCGGTGGGATCATCCGCGCTTCCA
GACCTGGATCACCACAGGAGCATGCCCGTACTTTTCGAGGTAAGGATTTG
TCGACATCGGGAATTCAGTGCTTCAGTCTGTCACCTACTACAGATCAGGG
TCTCAACGTGTAGAATGGATTTCACATGTTGCAAATCATAAGAGGGCGTT
TCGTTCCCACGGCCGAAGGAATGAAAAATATGAATAATGTCGCTGCTATC
GAAACCCCTCGAGAACTGGTCTGCGCGTGGGGTGCTCAGCTATGCAGACA
AAATCTTGAACGCTGTGTAATTGTCATGCGCCGATTGTTGGGAGGCTATC
GGTACCTTCATCGACTTCTCTGACCACGGACATTGAAGCAATGCTTCCAC
ATTCGATAAACACTCTTGCGACGGTAGCAGTGCACGAGTCTTTCTGGGTC
TCAAACGTGAAACGCTCGATATCTATCTCAGCTTCGAACATACGACGGGA
TAGGTTATCCGATGGGCTAAATAGACCGCAATTTCAACATCGGGGTGGGC
GTTCGAAAAATATGGTTGGGTATTCATCGGAGTAACCGAAGGTTCTGGGC
CATCGTGTGCAGTCCCTATCGTTGCATAACTCAAAATCTGTGACTGACTG
CACTCCCCGCTTTCACATATGCCAAACACTGCACTCGTGGGGGCGGGCAT
TCCTATGGAACGTCTCTGGTTCATGAAGGCTCGGCCACACGGACGTTGGA
AAATTTCGCCGCATATTTGGTCAAAGGTGTCATTGCAAGTCCTATCTTCA
TATGCATCCCCTACTCGCGGGGGCGAGCACTCCCATAATGCGTCGTCAAT
TTTGCGGAGCCCCTCTTGTGTCCACCAACGCACCAGGTGCGTTTTCATCC
ACGACCCCCGCATCCGCGGCCCCAACGCCGCCTACCTCTACAAGCACAAC
AGCAACCGATCGAATTCCGGCAAGAGCGGGGGCAGCGTCGGATCTCCGCT
TGGGAGAGACATCTTCTACTGGCCGGACATGCCGCGGACGGACGCCGGTA
GCAACGCGGTAAGGTTCAGTTCTCGGAATGCAAACGTCGGTATTGTTTTA
TCATGGGTGTGTCGACAGTGGTGGTGGATGAAATAGTGCATCAGAACTCG
TGTCTAACGTTGCTTTTGTTTTGTTTTGGCGTCGCTTCAGTGAGTGAATG
TGCCAAGGTCCGCGATGAAGGGCACATATTGCGGTAGGGAATGCAGCTTT
CATTTCCGGTGCTTGCTGAGGGAAAGGAACCGACAGGCCCAGACGTACGT
GTTTTCTTTCGCGTTCTATCGCGAAGTCCTTCTAGACTATGGTCACGATT
GCGTAACTCTACCCTCCAACGACGATGCGTTCAGCTTTCGCTCGCCCACT
CGCCTCACACGAGGCAGCGACTGGCCCAAGCGAAACATTTTCATCCATGC
TCTATCGTGAAGCAGCCGCACAATGCATCGCTGAGAACGCTCCACTTCAC
ATTTGAATAACAAGACAAAAACCAGCAGATGATCCAAAACTCCAGTTATT
ATCAAATTCATAGCCGTAGGGGAATCAATATTATGAGATTCTACGTTCAT
CAGAGTACAGTGTGTTCACTTTTCTCTTAGCTTGCGCCCCTCTTCCATAT
TCTATCGTGAAGAAGTTCATCTGACTACAGAATTTCCACTTTCCTCTGGG
CTGATGCCCCTCTTGCCTCACTCCCCTTACGCGGTTTGCCCCAGCTTCCG
GCGATATCCGTCAACTACGACATGGACCCCAGCATGCTCCAAAGCGAGGA
CGCAACCGAAAGGTGAGAGGGAAATGTTCCTCCGCACTGCCAAGACCACA
GGCGTACGCAGAGAATTCAAAATTCAACCGATGAAGGCGGCGCCATCTCA
CACACACGTACCCGCCCCAAAGGTTGCAAATTCCAAACCTCATACAAATA
TATTATAGAACATACACCCAGTTCGCAAATTTCATCTACCAGAGTGAGAG
ACATCGCAGTGGTGCGAGACGATCATCCACGCACGTTGTATTCCGCAAGC
GGGAGGGTCTAGTTTCGTTGGAGAGCATCTGACGCCGTTGGGAAGCTAAT
CGTTCGAAAGCGGTGTCAACGACAAAGTTCTCGACGTGCGGCGATGAAAC
CCATGTGTTGTCGCAACCTCATCAAGGGGTTCGTTCTTATCCTGTCGTTC
TTTCAAGACACCTTTTCTGCATCCAACACGGATAGCCTATGTTGTACCTG
TAGCTCGCGACGTCGCCACACAGCAATCGCTCTCGTTCATGTTGTCTCAG
TTGATGTAGAACTTAGTGAGGGAAAAAATCGATCTCAAAAACAGCTACTC
GAGTATTCAAGAAAGAGTAAAACCTGCTCGAGAAATGTTACCAGCACAAG
AGAAAACATCACATGAAGTAATCGTTCTTCGTTCAGGAAAAATACAGGAA
GAAGACAAAGCGAAACTAGATTTAGACAAATTGACTAAAACGCCCCCCCG
GTCACTCTCAATCTCGTCCTCCCCCAATTGCGAAGAGCGGTGTATCAGAT
GTGGTATTCACTGGTGAACACCGTCACGGAGATCAGAGAGCAACGAAACA
CCCTGGCAGGGATGGGCAGCGCTTCTGAAGCATCCTACGACCCGAAAGAG
TCGTTCTCCAACGCACCGCCATCGAGAGGTAGGTATTCATCAGAAACCAA
TCGTGAGCAGCGAGTCCAGCTTGCGGTCGCGAAGACGTGCCACCTTTTGG
GGGTGCGTTTTGGACCAGGTCCATGCCTGAACATAGATTCACTGTTTGAG
GGACAGAGGGTCGACTTCTTATGCCACATGCCGTTTTTATTGTCTCCACG
CAAGACACTCAATTTCCATTGGAATTTAGAGTCTTCCCTGTGGACACGGT
ACATCTCCGCCTCACACGTCGTTGATGACCCGTGCATTCAACCAACTCCA
TGTGCGGCGAGGAAATGTCGTTGCCACGAAACAAGAGGCAATCACAATAT
ATGCTTTCGCGAAACACTCTTGACTCAACGCCTACCCCCATTCTTCCCCA
CGCCATGTTCATAATGTCTCGATATAGAGCCTTTATTTCAACTCCCAGGT
TGTCGATAGTTTCCGTTTTGGTGTTCCGTAGCGCGCATGAGTACCAGCCA
TGGGATGTCCCTTCAGTATCCGTCTTCAGTGCCAATAGAATGAAGTGCCA
AGCTTGCCACCACCACCACTGATCAGACTTGGTCCCGTGAGCTCACAAAC
GAACAACTATCCACAAACTACCCTCGACGTTTGATAGCCTTACCCAGTGC
TCTCAAAACAACGTGAAAAAACAATGGGAAGAGTGGTTGTAGGGAAAGCC
GAGAACAAAAAGCAATCGTACCCAGTCGGTTTTTTACCATTCATTGTAAA
GACTTCAACATATCCCCTTCGACTGTGGCTTTTTCTCGAACGGGTAGTCT
TTAGATCTTTGTACTTGTATTTTGTTTCTTTACAAAACAATCGAACAACT
ATACCGTTGTTAGGGGGGTCCCGAATGTTGGTTGATCCAAAACCTTTCAT
TTCTGTCGGAATCCCCTACTCCTTTGGCCGCCGGCGACAGCAGAGGCGAC
CTTCGAGACAAGGCCCGACTGCGACAGGACGAGGCCGCCGCCGCCGCCTC
CGCCGCCTCAGGCTCCTTTTCCCAGCAACAACCGGTCCTGTTCCTCCCCT
TCCTATTGGCGAACGAAGAGCCCGGACGGCCGGCTGCCTCTGTTCGTCCG
CATGTCGTGCACGCTCTCGGTCTCGCCGGCCTACGTGCCGCTTCCCACTA
CCACCGGTGGGTTTGCGGCGGGGGGTGTGCTCGAGTTCGGATGAAATATG
GTTCGGTTCGCGCCATGCGTAGGTATCATCATCTCACGTGTAGGCTGCTG
CATCTGTAGTTGTGTCTTTCAAGTTGGAAGCAAAAAAAATCCATTCGAAT
CACGGTACGACGTACCTCGCTCTACCACGATTAGTGCAGTTAGAGGAGTG
TATCTATGTTCAGTTGGGCCTCTCCAGTTGGATGCGAATAACTGTCCAAT
CTCCACATGCGTAGGACGCACCAGCTCACTCTACTTACGTCAATTCTGTA
GTTTGGTCTCGTACGTTGGATGCAACAATTTTCCATTTCGCGTACTGCAT
AGGACTTGTCTCACTCTACTATGTTGCAGTGGGACGGAGTGGAGTGTAGT
AAGCCGCTGCATCTATGCTCAGGTTCTAATCGAATCATGGGTAGGACGCA
TCACTCTACCCGTAAGTTGGCTGCGGCGGCAGCACGGCGTCCTAGCCCCT
TGTTTGTAAAGCATGGCGCATGATGTAGTAGCAATTCGAATGCTTCAGCG
GGTAGCAGCTAAATTTGCACCTTCAAACGACTGTGCATCTCGACACGCCA
GGTTCTTGCTATGTATATGTTCGCACGACATTATCTAGGTACCTGTCAGA
AATTGAAAATACTGCTGTAGTTTCGCCGCCTTTTTGGCTGCAAAGAACGC
ATGGACCGTGGCACCGTGGCCACCAAAACAGTAATTCGTTTTTCAATCAT
GCCTTCTTCAACCAGCCGATCACCAAGACCCTGAAACAATGCATACTCCA
CGCGCCCTTTACCCGTCTAAAAGGTCTCCGCCACATCTGGAAGGATCCTT
GCCAAGTCTGCGAGGCCGCGGATCGGCCGGAGATATCTCCGGAGATCGTC
CCGCCGGTGACAGTCCCGGCCACAGTCCCGCGCCCACTCCGAGCAAGGAC
CGGCGGCGGTGGCGGCAGCGTTCAGCACGCACCGCCATCCTTCCCTCTGG
CGGACATCGACCCTCGCTCTTCCTTGTCCTTAGAGGCACGGACCCCAGCT
AGGATCATGAGG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig862:447..7458- >mRNA_E_fasciculatus_S2_contig862.16743.1 ID=mRNA_E_fasciculatus_S2_contig862.16743.1|Name=mRNA_E_fasciculatus_S2_contig862.16743.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=930bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig862:447..7458- (Ectocarpus fasciculatus EfasUO2)
GGCAGACCTAGCCTGGACCTTGCGTCTGTCAACCGAAAGACGGAGATATG
CCGCAACTGGCAACAGGGTCGCTGCGTCGCTGAAGCTTGGAAGTGCGCCT
TCGCCCACGGAACGCACGAGCTTAGACGCCAGAGTCTCGACGAGATGGAG
TACACGGGCCGGATCCCCAACGCCTCCAAGTTCCGATGCTACCCTTGCCT
GACCTGGATCACCACAGGAGCATGCCCGTACTTTTCGAGGTGCGTTTTCA
TCCACGACCCCCGCATCCGCGGCCCCAACGCCGCCTACCTCTACAAGCAC
AACAGCAACCGATCGAATTCCGGCAAGAGCGGGGGCAGCGTCGGATCTCC
GCTTGGGAGAGACATCTTCTACTGGCCGGACATGCCGCGGACGGACGCCG
GTAGCAACGCGGTAAGAATTTCCACTTTCCTCTGGGCTGATGCCCCTCTT
GCCTCACTCCCCTTACGCGGTTTGCCCCAGCTTCCGGCGATATCCGTCAA
CTACGACATGGACCCCAGCATGCTCCAAAGCGAGGACGCAACCGAAAGAG
CGGTGTATCAGATGTGGTATTCACTGGTGAACACCGTCACGGAGATCAGA
GAGCAACGAAACACCCTGGCAGGGATGGGCAGCGCTTCTGAAGCATCCTA
CGACCCGAAAGAGTCGTTCTCCAACGCACCGCCATCGAGAGGTCTCCGCC
ACATCTGGAAGGATCCTTGCCAAGTCTGCGAGGCCGCGGATCGGCCGGAG
ATATCTCCGGAGATCGTCCCGCCGGTGACAGTCCCGGCCACAGTCCCGCG
CCCACTCCGAGCAAGGACCGGCGGCGGTGGCGGCAGCGTTCAGCACGCAC
CGCCATCCTTCCCTCTGGCGGACATCGACCCTCGCTCTTCCTTGTCCTTA
GAGGCACGGACCCCAGCTAGGATCATGAGG back to top
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