mRNA_E_fasciculatus_S2_contig8607.16733.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: PCI (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G271_ECTSI) HSP 1 Score: 521 bits (1341), Expect = 2.110e-181 Identity = 305/374 (81.55%), Postives = 308/374 (82.35%), Query Frame = 1
Query: 1 MADVDMKDASAAATAAGEKGEVAAAAAVPKSIKVEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCDALAKLLPDDCPDKAELTRLLAKLPSEAVAEP--PATEAMEVDSEAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSGRLPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 1116
M DVDMKDASAAATAAGEKGEVAA VPKSIKVEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLC+ALAKLLPDDCPDKAELTRLLAKLPSEAVAEP P TEAMEVDSEAAKKE XXXXXXX LASVVAA+LPEVEVYLSTL LTTLLRHKANA RPRLLGLHRTCCLRHDE+GQATTLNLLLRNLLSQNLLDQAYKLASKTNFPE CSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKV QNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE
Sbjct: 1 MTDVDMKDASAAATAAGEKGEVAA---VPKSIKVEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCEALAKLLPDDCPDKAELTRLLAKLPSEAVAEPETPTTEAMEVDSEAAKKEAAAAATAEXXXXXXXEEALASVVAAKLPEVEVYLSTLVLTTLLRHKANA---------------------------------------------RPRLLGLHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPESCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVSQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 326
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: Proteasome (regulatory subunit C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND8_9STRA) HSP 1 Score: 322 bits (825), Expect = 1.230e-102 Identity = 199/368 (54.08%), Postives = 235/368 (63.86%), Query Frame = 1
Query: 40 TAAGEKGEVAAAAA---VPKS---IKVEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCDALAKLLPDDCPDKAELTRLLAKLPS---EAVAEPPATEA-MEVDSEAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVA-VAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSGRLPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIV 1110
TAA V+A AA PK+ I + DI RN IV+ + + RLT RAI T IR RV VL +A+ +P+ P +A++ L LP+ EA AEPP+ A MEV+ E K S+ A PEVE Y+ L L +LR A+ +A LL R SFNRRTLD LA+K++FY SLA E +GR + R LL LHRTCCLRHDE+GQAT LNLLLR +LSQNLLDQAYKLASKTNFPE CSNNQFCRYLYYMGRI ALQLDYTDA+ KL Q +RK P NTA+ F+ A Q+L +IVQLLLGEVPER+VFN G +L PYL LTQAVR GDLVEFN V
Sbjct: 7 TAAATAAPVSAPAADDATPKAAAPITLADIKRNIGFIVRATESNQHRLTLRAIRNTTAIRTRVAPAVLKEAVMAYVPETHPARAQMLETLDALPAPAVEAAAEPPSEAASMEVEGEKEKDPAAPEGAETPEPAKEKWEEKLSLAA---PEVETYVCMLVLAVVLRSGGETGALLPLANALLARVTSFNRRTLDHLASKVLFYCSLAHERAGRASDMRAPLLALHRTCCLRHDEIGQATALNLLLRQMLSQNLLDQAYKLASKTNFPETCSNNQFCRYLYYMGRIGALQLDYTDAHAKLTQCARKAPANTALAFRTAVQRLTVIVQLLLGEVPERAVFNAAGMRAALAPYLQLTQAVRLGDLVEFNAAV 371
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1L3_9STRA) HSP 1 Score: 287 bits (734), Expect = 3.820e-89 Identity = 182/337 (54.01%), Postives = 228/337 (67.66%), Query Frame = 1
Query: 100 VEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCDALAKLLPDDCPDKAELTRLLAKLPSEAVAEPPATEAMEVDSEAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSGRLPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIV 1110
+ED+ +I K V + RL +RA+ NT +R + +L A +LLPD +A L ++ LP +PPA A++ + XXXXXXXXXXXXXXXX S++ PEVEVYLS L +TTLLRH +A A L + NRR+LD L AK+ FY SLA E G L RP L+ HRT CL+HDEMGQAT LNLLLR+LL N ++QAYKL SKTNFPE SNNQFCRYLYY GRI A+QL+Y DAY KL+Q+ RK PQNTA+GF+R QKL++IVQLL+GEVPER+VFNQ F +L PYLALT+AVR GDL++FN+++
Sbjct: 44 IEDVRHIVAMIEKAVATNQTRLISRALRHNTAVRTKATKVLLTKASDELLPDGHELQARLMEQISALP-----DPPADMALDGGAXXXXXXXXXXXXXXXXXXXXXXAKRTSII----PEVEVYLSLLVVTTLLRHNLVDEARTAAEALFLYVGTLNRRSLDPLRAKVYFYLSLAHEQKGSLAAIRPHLMAAHRTACLQHDEMGQATLLNLLLRDLLHHNQVEQAYKLVSKTNFPEKASNNQFCRYLYYTGRIAAIQLEYGDAYNKLLQAIRKAPQNTAVGFRRIVQKLMVIVQLLMGEVPERTVFNQPEFRGALAPYLALTKAVRVGDLMQFNQVL 371
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE23_9STRA) HSP 1 Score: 269 bits (688), Expect = 3.210e-85 Identity = 151/291 (51.89%), Postives = 195/291 (67.01%), Query Frame = 1
Query: 241 KLLPDDCPDKAELTRLLAKLPSEAVAEP--PA--TEAMEVDS-EAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSGRLPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEF 1098
K +P DCP + + + K+P VAE PA T++M+VD+ E A+K + + V LPEVEVY+ TL +TTLLRH+ NA+A A +ER +FNRR+LD +K FY SLA+E RL RP LL L+RT C+RHD+MGQA LNLLLRN LS +L++QA+ L+ + FPE SNNQFCRYLYYMGRI A+QL+Y++AY +LM +SRK PQ A GFQ+ KLV+IVQLL+GE+PERS+FNQ V+L+PY LTQAVR GDLV+F
Sbjct: 6 KYVPTDCPTYQVMLKAIEKVPETGVAESKKPADETDSMDVDANEGAEK-------------------IVAAVTTVLPEVEVYIFTLIVTTLLRHELNAEAAYAATAQIERIRTFNRRSLDIFTSKAYFYLSLAYEKINRLENIRPTLLALYRTSCVRHDDMGQAVLLNLLLRNYLSYHLVEQAHTLSLRAAFPESASNNQFCRYLYYMGRIQAVQLEYSEAYQRLMMASRKAPQGYAGGFQKIVYKLVVIVQLLMGEIPERSLFNQPELRVALQPYFVLTQAVRNGDLVQF 277
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYH6_9STRA) HSP 1 Score: 261 bits (666), Expect = 2.570e-80 Identity = 140/223 (62.78%), Postives = 157/223 (70.40%), Query Frame = 1
Query: 451 LPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSGRLPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASK-TNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 1116
LPEV VYLS L + + + A A L+ + NRRTLD L +K FY SL E G LP R LL HRT CL HDEMGQAT LNLLLRNLLSQNL++QAYKL K TNFPE SNNQFCRYLYY GRI ALQL+Y DAYTKL+QS RK PQNTA GF+R QKL++IVQLL+GEVPERS FN K + +L PYL LTQAVR GDL+ FN V E
Sbjct: 43 LPEVSVYLSLLVINAFIGAEMLDQAQAACEALVTLLETLNRRTLDPLTSKAYFYLSLVHEKKGTLPSIRTLLLSAHRTACLHHDEMGQATLLNLLLRNLLSQNLVEQAYKLGVKLTNFPEKASNNQFCRYLYYTGRISALQLEYGDAYTKLLQSLRKAPQNTAAGFRRTVQKLMVIVQLLMGEVPERSTFNHKEYRAALAPYLVLTQAVRAGDLLRFNAAVAE 265
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: 26S (proteasome non-ATPase regulatory subunit 3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZW09_9STRA) HSP 1 Score: 259 bits (663), Expect = 4.500e-79 Identity = 154/339 (45.43%), Postives = 204/339 (60.18%), Query Frame = 1
Query: 103 EDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCDALAKLLPDDCPDKAELTRLLAKLPSEAVAEPPATEAMEVDSEAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSGR-LPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 1116
+++ +N LI K V TR IRR + + L A+ ++L +D +A L + LA +P EA + D A + + + ++L EVEVYLS L + LL+ + DA +A ++ R FNRRTLD AA+++ Y++ AFE G + RP LL HRT CLR DE+GQAT LNLLLRN L +NL DQAYKL SKT FPE SNNQF RYLYY+G++HA+QL+Y+D+YTKLMQS RK PQNTA+GF+R KL IIVQLL+GEVPERS+FNQ +L PYL LT AVR G+L +F ++ +
Sbjct: 6 KELKKNVGLIEKVVASSNKEKLTRVFRTTAHIRRELTSIELTRAIQEILAEDNEARATLLQFLALIPPEA--------EQDFDMNAGEDDPTVNEVEKDAN--------VHMERSELIEVEVYLSLLVIALLLKSQLGQDAQRLADQVRGRCAQFNRRTLDIFAARVMTYFAYAFERYGDGITAIRPLLLEAHRTACLRCDEIGQATLLNLLLRNYLHENLYDQAYKLVSKTTFPEAVSNNQFVRYLYYVGKVHAVQLEYSDSYTKLMQSIRKAPQNTAVGFRRTVYKLAIIVQLLMGEVPERSIFNQPELKTALAPYLQLTNAVRVGNLEDFTAVLAQ 328
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: 26S (proteasome non-ATPase regulatory subunit 3 (Fragment) n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A4BAK4_9STRA) HSP 1 Score: 254 bits (648), Expect = 2.710e-76 Identity = 155/349 (44.41%), Postives = 208/349 (59.60%), Query Frame = 1
Query: 79 AVPKSIKVEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCDALAKLLPDDCPDKAELTRLLAKLPSEAVAEPPATEAMEVDSEAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSGR-LPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGEVG 1122
A +++ E++ R L+ V+ + R + + +R+ + A L A+A+LLP K L LLAK+ ++A A P AM ++A+ +E ++ L EVE+YL L L++ + +A+ A +++ R FNRRTLD L A+ YY+ E GR LP R LLG HRT CLR+DE GQAT +NLLLRN L+ NL +QAYK SKT FPE SNNQF RYLYY+G+I A+QL+YT++YTKLMQS RK P NTA GF+R KL IIVQLL+GEVPERSVFNQ +L PYL LT AVR G+L +FN ++ + G
Sbjct: 46 AAEEALVYEELKRTITLLETAVRTNAKEKIPRVLRATSKLRKTLSAAQLRLAVAQLLPSQNASKPALLALLAKIEAKAQALKPQDVAM---TDASSEEEAPAAATL------------ALPVVDLIEVEIYLFLYVLAALVKFRLAQEALDTADKVVARCQQFNRRTLDLLQARAFTYYATIHEQFGRDLPAIRNTLLGAHRTACLRYDEAGQATLINLLLRNYLNDNLYEQAYKFVSKTTFPETVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKTPANTAFGFRRTVHKLAIIVQLLMGEVPERSVFNQDELRKALAPYLQLTNAVRVGNLEDFNVVLSQHG 379
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: PCI (domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CGI9_SAPPC) HSP 1 Score: 251 bits (640), Expect = 1.200e-75 Identity = 151/338 (44.67%), Postives = 203/338 (60.06%), Query Frame = 1
Query: 106 DIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCDALAKLLPDDCPDKAELTRLLAKLPSEAVAEPPATEAMEVDSEAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSGRLPEA-RPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 1116
++ +N LI K V + R + IRR + L A+ ++L +D ++ L + + + +A A +VD A + + + ++L EVE YLS L + LL+ + A+A A A + +R + FNRRTLD AA+++ Y++ AFE G A RP LL HRT CLR DE+GQAT LNLLLRN L +NL +QAYKL SKT FPE SNNQF RYLYY+G+IHA+QL+YTD+Y KLMQS RK PQNTA+GF+R KL IIVQLL+GEVPERS+FNQ +L PYL LT AVR G+L +F ++ +
Sbjct: 7 ELKKNVALIEKVVASNNKEKLARVFRTTSGIRRGLTPAELTRAVTEILAEDNEIRSSLLKFIGLVKPDA--------ADDVDMTAGEDDPAVGDVEKDAS--------VHMERSELIEVETYLSLLVIALLLKSQLGAEAQACADLVRQRCMQFNRRTLDLFAARVMTYFAYAFERYGEGYTAIRPLLLTAHRTACLRCDEIGQATLLNLLLRNYLHENLYEQAYKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLEYTDSYNKLMQSIRKAPQNTAIGFRRTVYKLAIIVQLLMGEVPERSIFNQAELKTALTPYLQLTNAVRVGNLEDFTAVLNQ 328
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: PCI (domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3G0_9STRA) HSP 1 Score: 250 bits (638), Expect = 2.510e-75 Identity = 145/339 (42.77%), Postives = 205/339 (60.47%), Query Frame = 1
Query: 103 EDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCDALAKLLPDDCPDKAELTRLLAKLPSEAVAEPPATEAMEVDSEAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFEVSG-RLPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 1116
+++ +N +I K V + R T +RR + + L A+ ++L +D ++ L + ++ + + E+ +VD A + + + L EVE+YLS L ++ L + + ++ A+ + R+ FNRR+LD A++ + YY+ A E G RP LL HRT CLR DE+GQAT LNLLLRN L +NL DQA+KL SKT FPE SNNQF RYLYY+G+IHA+QLDYTD+YTKLMQS RK PQNTA+GF+R KL IIVQLL+GEVPERS+FNQ F ++L+PYL LT AVR G+L +F+ ++ +
Sbjct: 6 KELKKNLSVIEKAVNANQKEKLARVFRTTTSVRRGITSVELKRAIEEVLAEDNESRSVLIKYVSLVKPD--------ESEDVDMNAGETDPVVGDVEKDDDSNVHLDR------SDLIEVEIYLSLLVISKLFKAQLGCESQALTDFVRARSEEFNRRSLDIFASRALTYYAYAHERFGSNYAGIRPVLLAAHRTACLRSDEIGQATLLNLLLRNYLHENLYDQAFKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLDYTDSYTKLMQSIRKAPQNTAVGFRRTVHKLAIIVQLLMGEVPERSIFNQDEFKIALEPYLKLTNAVRLGNLEDFSSVLAQ 330
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Match: PCI (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLD5_9STRA) HSP 1 Score: 249 bits (637), Expect = 3.930e-75 Identity = 156/340 (45.88%), Postives = 204/340 (60.00%), Query Frame = 1
Query: 100 VEDIVRNAELIVKGVQGDTARLTTRAISRNTP-IRRRVQADVLCDALAKLLPDDCPDKAELTRLLAKLPSEAVAEPPATEAMEVDSEAAKKEXXXXXXXXXXXXXXXXXXLASVVAAQLPEVEVYLSTLALTTLLRHKANADAVAVAPRLLERAVSFNRRTLDSLAAKMVFYYSLAFE--VSGRLPEARPRLLGLHRTCCLRHDEMGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIV 1110
V D +R L+++ V A+ T + R+T +R+ + A L A+ ++LPD K L LLAK+ ++A A A +E+ AA E A + L EVEVY L L+++ DA A L RA +NRRTLD+L AK+ YY+ E LP R LL HRT CLR+DE+GQAT NLLLRNLL +NL +QAYK +KT FPE SNNQF RYLYY+GR+ A+QL+Y++A+TKLMQS RK PQ TA+GF+RA KL +IVQLL+GEVPERS+FNQ V+L PYL LT AVR G+L +FN ++
Sbjct: 30 VFDELRRTLLLLEAVVKTNAKEKTPRVLRSTSKLRKTLSAAQLTLAVTQVLPDKNESKPLLLALLAKIATKAEAASAAAPDVEMTDAAAPTEAPAAPETP-----------APLPVLDLIEVEVYFFLYVLAALVKYALADDARLAAQTALARAALWNRRTLDALQAKLFTYYAGVLEQFFPRELPALRGALLAAHRTACLRYDEIGQATLANLLLRNLLHENLFEQAYKFVTKTTFPEAASNNQFVRYLYYVGRVQAVQLEYSEAHTKLMQSIRKAPQATAVGFRRAVYKLAVIVQLLMGEVPERSIFNQDDLRVALAPYLQLTNAVRVGNLEDFNVVL 358 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8607.16733.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8607.16733.1 >prot_E_fasciculatus_S2_contig8607.16733.1 ID=prot_E_fasciculatus_S2_contig8607.16733.1|Name=mRNA_E_fasciculatus_S2_contig8607.16733.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=374bp MADVDMKDASAAATAAGEKGEVAAAAAVPKSIKVEDIVRNAELIVKGVQGback to top mRNA from alignment at E_fasciculatus_S2_contig8607:225..5842- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8607.16733.1 ID=mRNA_E_fasciculatus_S2_contig8607.16733.1|Name=mRNA_E_fasciculatus_S2_contig8607.16733.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5618bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8607:225..5842- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8607:225..5842- >mRNA_E_fasciculatus_S2_contig8607.16733.1 ID=mRNA_E_fasciculatus_S2_contig8607.16733.1|Name=mRNA_E_fasciculatus_S2_contig8607.16733.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1122bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8607:225..5842- (Ectocarpus fasciculatus EfasUO2)back to top |