prot_E_fasciculatus_S2_contig8602.16728.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8602.16728.1
Unique Nameprot_E_fasciculatus_S2_contig8602.16728.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length125
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8602.16728.1 vs. uniprot
Match: D8LDJ5_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ5_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 9.700e-48
Identity = 92/105 (87.62%), Postives = 94/105 (89.52%), Query Frame = 0 
Query:   16 SSSPGLYTPQPVPELQPNGPDVVRVQLRVGDSQRVVHSFRRSDPVTALFDVAAQALAKADGKELGSPFDVVAPGGRSLLKAGVVVVIPGTDGGDGDAATAAKPAG 120
            SS  GLYTPQPVPELQPNGPDVVRVQLRVG  QRVVHSFRRSDP+TALFDVAAQALAKADGK L SPFDVVAPGGR+LLKAGVVV  PGTDGGD   ATAAKPAG
Sbjct:  284 SSPAGLYTPQPVPELQPNGPDVVRVQLRVGGGQRVVHSFRRSDPLTALFDVAAQALAKADGKALPSPFDVVAPGGRALLKAGVVV--PGTDGGD--VATAAKPAG 384
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8602.16728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDJ5_ECTSI9.700e-4887.62Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 3..88
e-value: 4.9E-5
score: 25.5
IPR001012UBX domainPFAMPF00789UBXcoord: 35..75
e-value: 2.7E-4
score: 21.1
IPR001012UBX domainPROSITEPS50033UBXcoord: 33..65
score: 9.064
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 28..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8602contigE_fasciculatus_S2_contig8602:2276..4335 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8602.16728.1mRNA_E_fasciculatus_S2_contig8602.16728.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8602 2259..4335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8602.16728.1 ID=prot_E_fasciculatus_S2_contig8602.16728.1|Name=mRNA_E_fasciculatus_S2_contig8602.16728.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=125bp
MARAIALSLSQEESASSSPGLYTPQPVPELQPNGPDVVRVQLRVGDSQRV
VHSFRRSDPVTALFDVAAQALAKADGKELGSPFDVVAPGGRSLLKAGVVV
VIPGTDGGDGDAATAAKPAGGEESG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR001012UBX_dom