prot_E_fasciculatus_S2_contig8597.16718.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8597.16718.1
Unique Nameprot_E_fasciculatus_S2_contig8597.16718.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length113
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8597.16718.1 vs. uniprot
Match: D8LSG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG2_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 5.290e-66
Identity = 107/113 (94.69%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 LRANRKQVRPIDAERHRRMHLDKCFSCFDVLERGRVPSGMVWGGLALLTGAPELSKVKFILGMYDADRDGMANETELRMAMTACATGFCRLHRVEPPPDGKIHSLTQEAFLHQ 113
            LR NRKQVRP DAERHRR HLDKCFSCFDVLERGRVPSGMVWGGLALLTGAPELSKVKFILGMYDADRDGM NETELRMAM+ACATGFCRLHRVEPPPDGKIHSL QEAFLHQ
Sbjct:   79 LRVNRKQVRPADAERHRRTHLDKCFSCFDVLERGRVPSGMVWGGLALLTGAPELSKVKFILGMYDADRDGMVNETELRMAMSACATGFCRLHRVEPPPDGKIHSLAQEAFLHQ 191
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8597.16718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSG2_ECTSI5.290e-6694.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 4..112
e-value: 1.8E-6
score: 29.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 52..87
score: 9.157
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 20..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8597contigE_fasciculatus_S2_contig8597:5849..6392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8597.16718.1mRNA_E_fasciculatus_S2_contig8597.16718.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8597 5849..6393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8597.16718.1 ID=prot_E_fasciculatus_S2_contig8597.16718.1|Name=mRNA_E_fasciculatus_S2_contig8597.16718.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=113bp
LRANRKQVRPIDAERHRRMHLDKCFSCFDVLERGRVPSGMVWGGLALLTG
APELSKVKFILGMYDADRDGMANETELRMAMTACATGFCRLHRVEPPPDG
KIHSLTQEAFLHQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom