mRNA_E_fasciculatus_S2_contig859.16709.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI) HSP 1 Score: 1146 bits (2965), Expect = 0.000e+0 Identity = 752/871 (86.34%), Postives = 759/871 (87.14%), Query Frame = 1
Query: 1 MSSTEERRTSARQRRVRPTAHSSALESLRAARDGLESRTEQHEDXXXXXXXXXXXXXXXXXXXXXXXXDDFVVDDDGLGYADDGEEFIEKADGSEGAAGGRGDKGGGRKGVNGKINADSLRRKARKLNQLGDEASQAGGGIKKFLRTGGGSTVGPSALSRNSSAAPGARRGGGAGAGGALNLDDMLSDLTSNPIADLAPGNGNSXXXXXXXXXXXAMPLSKRKRGLVTPQSARSRRSYGSTASRGSSSAGSAS--RRPPVPSAWTVRDYEDDPGASGDGDNDIVGDDVGGFEHFDGEEDANDAGDVAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEKELAAVVSPEAPATAAAPVAVAA---AAKPRSRFARMKETNNIAVTAAAEAALRPKIVEEKPAAXXXXXXXXGKGGEGKGSYMPSLEFQGPQYSLSEAPSTPAGSVASASSWLQKDETGEFMRMFWLDATEQNGTIYLIGKVAVPSSSSGSAS--PQGDSGATMGTTFLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGG--AKRADIGAVYQEMASVLVPRVIKRNAKGEQFR-RPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK 2583
MS TEERRTSARQRRVRPTAHSSALESLRAARDGLESRTEQHEDXXXXXXXXXXXXXXXXXXXXXXXXDDFVVDDDGLGYADDGEEFIEKADGSEGAAG RGDKGGGRKGVNGKI ADSLRRKARKLNQLGDEASQAGGGIKKFLRTGGGSTVGPSALSRNS LNLDDMLSDLTSNPIADLAPGNGNSXXXXXXXXXXX PLS+RKRGLVTPQSARSRRSYGSTASR RRPPVPSAWTVRDYEDDPGASGDG GDDVGGFEHFDGEEDA D GD AM XXXXXXXXXXXXXXXXXXXXXX +AKPRSRFARMKETN+IAVTAAAEAALRPK VEEKPAA K GEGKGSYMPSLEFQGPQYSLSEAPSTPAGSVASASSWLQKDETGEFMRMFWLDATEQNGTIYLIGKVAVPS SSGSAS PQGDSGA GTTFLSACVAVHSIEREVLVLPRLVEKDG+ SDGDED GGGG AKRADIGAVYQEMASVLVPRVIKRNAKGEQFR +PVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAE+VA+ XXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFF KLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK
Sbjct: 1 MSGTEERRTSARQRRVRPTAHSSALESLRAARDGLESRTEQHEDXXXXXXXXXXXXXXXXXXXXXXXXDDFVVDDDGLGYADDGEEFIEKADGSEGAAG-RGDKGGGRKGVNGKIKADSLRRKARKLNQLGDEASQAGGGIKKFLRTGGGSTVGPSALSRNSXXXXXXXXXXXXXXXXGLNLDDMLSDLTSNPIADLAPGNGNSXXXXXXXXXXXXXPLSRRKRGLVTPQSARSRRSYGSTASRXXXXXXXXXXXRRPPVPSAWTVRDYEDDPGASGDG-----GDDVGGFEHFDGEEDAGD-GDAAMEDASDSIIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAKPRSRFARMKETNDIAVTAAAEAALRPKTVEEKPAAAAAAVR---KDGEGKGSYMPSLEFQGPQYSLSEAPSTPAGSVASASSWLQKDETGEFMRMFWLDATEQNGTIYLIGKVAVPSPSSGSASASPQGDSGAA-GTTFLSACVAVHSIEREVLVLPRLVEKDGEYSDGDEDAGGGGGSAKRADIGAVYQEMASVLVPRVIKRNAKGEQFRCKPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEEVAAXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFQKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK 858
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LXN8_9STRA) HSP 1 Score: 281 bits (718), Expect = 2.430e-81 Identity = 168/420 (40.00%), Postives = 239/420 (56.90%), Query Frame = 1
Query: 1327 VASASSWLQKDETGEFMRMFWLDATEQNGTIYLIGKVAVPSSSSGSASPQGDSGATMGTTFLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGGAKRADIGAVYQEMASVLVPRVIKRNAKGEQFR-RPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASD-ESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWS 2580
V A++ Q+ E E++ +F+LDA E NG IYL GK+ + + +G++ F+S CVAVH ER + VLPR + ++ G +R + VY+E++SVLVP V+ R +G+ FR +PV RKYAF ++PR ET YLK+ Y A + + C SGGKT++ IFG + +E FL+KRKLMGPCW+T+R PK+N++ VSWCKVE+A ++PK + R V + P A A+ G + ++SLS+KTVV+P TH HE+V LS +VH ++ DG ++ +G + IR LG S G YP FPHD + K N I NER LLSLFF +LQ EDPD+L +HNL+GF+ D++L+RA+ KL WS
Sbjct: 2 VGDAAAAAQQGE--EYVNIFYLDAAENNGVIYLFGKLPIQDGTGAGGVVKGEA----PRKFVSVCVAVHGCERNLFVLPRSIPDTFKED--------GTPERVGMTEVYKELSSVLVPSVMPRT-QGQSFRCKPVKRKYAFEHGAIPRTETDYLKVVYSATHGVPSQAQC-SGGKTYERIFGTTSSALELFLLKRKLMGPCWVTIRKPKLNSSVVSWCKVELAVENPKDVVR-----VVNSGPVAAGASAGATTTAGGGINVSLADCGPNPL----LTSVSLSIKTVVNPVTHMHEIVMLSGIVHNKIDADGDTEIRNGVNQSRFTFIRQLGVSCGNSYPAAFPHDTR---KVCAQNK----------IHAATNERELLSLFFSRLQLEDPDILSSHNLLGFEADVILARAIANKLPNWS 383
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UH04_9STRA) HSP 1 Score: 275 bits (702), Expect = 2.340e-73 Identity = 175/443 (39.50%), Postives = 244/443 (55.08%), Query Frame = 1
Query: 1297 SEAPSTPAGSVASASSWLQKDETGEFMRMFWLDATEQNGTIYLIGKV-AVPSSSSGSASPQGDSGATMGTTFLSACVAVHSIEREVLVLPRLVEKDGQD-SDGDEDGGGGGAKRADIGAVYQEMASVLVPRVIKRNAKGEQFR-RPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK-AQHAAQGLLL 2613
SEA + A + + + ++ ++ MFW+DA E+NG +YL GKV V +S + PQ ++F+S CV V + R + VLPR K+G D + GDE + + V++EM SVL P+ I +G +R +PV RKYAF D+SVPREET Y+K++Y A Y +VCE GG+ F IFGA +E+F++KR+LMGPCWI +RNP N AP SWCK+E+ +PK I+ +++ + P P VVTM++ +KTVV+P TH EVV++SA+ H+ V LD ASDES M IRPLGQ++ FP D ++VK + +Q MPNERALLS F ++ DPDVLV HN+ G+D +LLSR LK+ WSK + QGL L
Sbjct: 403 SEAAAAAAAANLDTITKVDEETNEKYTDMFWIDACEKNGVVYLYGKVEVVHNSGKDNKKPQ--------SSFVSCCVVVRNNLRSLFVLPR--RKNGSDPNSGDE------LEYESMADVHKEMNSVLKPKCIPL-VEGASWRGKPVNRKYAFADISVPREETTYMKVQYDAKYDVPSPEVCEQGGQFFSKIFGAGASTLENFILKRRLMGPCWIKIRNPMPNKAPASWCKIELQVANPKDISPIVSP-MRHPPP---------------------------------VVTMTIKIKTVVNPSTHKSEVVSVSAICHKRVLLDTASDESNTNMTQISLIRPLGQASSGMALAQFPRDFDNEVKNGMSQ-----------LQRMPNERALLSRLFTQIGLWDPDVLVGHNIWGYDLQLLLSRCTDLKVMAWSKIGRRRKQGLPL 783
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH) HSP 1 Score: 271 bits (692), Expect = 7.950e-73 Identity = 165/441 (37.41%), Postives = 239/441 (54.20%), Query Frame = 1
Query: 1282 PQYSLSEAP-STPAGSVASASSWL------QKDETGEFMRMFWLDATEQNGTIYLIGKVAVPSSSSGSASPQGDSGATMGTTFLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGGAKRADIGAVYQEMASVLVPRVIKRNAKGEQFR-RPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWS 2580
P + S+AP S G + SWL + +F+RM+WLDATE NG IYL G+V + S A P+ F+S C V ER + VLPR + +D G + R G VYQE++ +LVP +I + +G+ F+ +PVMRKYAF +VPR+ T+YLK+ Y A + C+ GGK+F+AIFGA +E FL+KR+L GPCWI ++ PKV N VSWCKVE +PK+I+++ + P P +V+M +S+KTVV+P +H HE+VA+SAL+H +V + ++ + M + IR LG S G+ YP FPH+I +V+ + + +QT ER LLS+F ++ EDPD+ +HNL+GF+FD+LL+R V KL WS
Sbjct: 173 PTFVDSDAPVSVSGGQKIDSKSWLLETPAEDNQPSEQFVRMYWLDATELNGVIYLFGRVPLAS-----ADPK------QPPRFVSCCAIVQGCERNLFVLPRAKPNEFKD---------GNSVRVSAGEVYQEVSKLLVPSIIPKQ-QGQAFKAKPVMRKYAFDHDTVPRDNTEYLKVIYSAKHGVPTPAQCQ-GGKSFEAIFGANISPLELFLLKRQLQGPCWIHIKAPKVANDAVSWCKVEFIVDNPKNISKVSQSEDLVPPP---------------------------------LVSMCVSIKTVVNPSSHLHEIVAVSALIHGKVDTEAETECNTNSMRRFTFIRALGVSCGQGYPPTFPHNIHQEVQ----------KHKEIALQTFNTERELLSMFLSRVMIEDPDIFASHNLLGFEFDVLLARLVANKLPNWS 548
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA) HSP 1 Score: 272 bits (695), Expect = 1.910e-72 Identity = 173/455 (38.02%), Postives = 238/455 (52.31%), Query Frame = 1
Query: 1249 GSYMPSLEFQGPQ-----YSLSEA----PSTPAGSVASASSWLQKDETGEFMRMFWLDATEQNGTIYLIGKVAVPSSSSGSASPQGDSGATMGTTFLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGGAKRADIGAVYQEMASVLVPRVIKRNAKGEQFR-RPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK 2583
G M LE+ G + YS+S PS +G V + + ++ GE++ FW DA EQNG IYL G+VA+ G F+SA V ++ +LVLP+ G D G R + VY+E+ +LVP VI R+A G+ F+ +PV R YAF VPREET+YLK+ Y AG+ + CE+GG+ F+ IFGART +E FL+KR+LMGP W+ VR PK + + K E +PK I R+ A P PA P +V MS+++KTVV+P + HEVVA+S + H V DG ++ + +RPLG SAG +P FPHD+ +V+A R IQT NERALLS FF +LQ EDPD++V HNL+GF+ ++LLSRA LK++ W K
Sbjct: 356 GVKMEGLEYAGREEEEDPYSISSVAAAGPSAGSGQVTWEAVVREDEDGGEYVPFFWTDAHEQNGVIYLFGRVAIE-----------------GGRFISAACCVQGVQHSLLVLPKRTGNAGPD---------GKDVRYGMAEVYKEVQDLLVPSVIPRDA-GQGFKCKPVRRHYAFELEEVPREETEYLKVVYSAGHGLPSPERCEAGGRYFERIFGARTTALELFLLKRQLMGPSWLKVRGPKPAPSSATIAKFEFVVDNPKLIRRMEA-----PPPAPP------------------------------MVVMSVAIKTVVNPASQLHEVVAISTMTHVAVNCDGPTETGPHHIRQVTAVRPLGSSAGPGHPTAFPHDMAREVEAQSRKTR---------IQTQGNERALLSWFFQRLQTEDPDLVVGHNLLGFELEVLLSRATSLKVSVWHK 739
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IIV6_9STRA) HSP 1 Score: 268 bits (685), Expect = 3.090e-71 Identity = 161/422 (38.15%), Postives = 225/422 (53.32%), Query Frame = 1
Query: 1348 LQKDETGEFMRMFWLDATEQNGTIYLIGKVAVPSSSSGSASPQGDSGA---TMGTTFLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGGAKRADIGAVYQEMASVLVPRVIKRNAKGEQFRRPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRL-LAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSA-----GEEYPKVFPHDIKHQVKAAEANARRAGRGSGVP-IQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK 2583
++ E ++ +FW+DA+E+NG ++L GKV V + +G + ++F+S CV +H R + VLPR GG G + A + V+ EM VL PR I + + V RKYAF D SVPREE+QYLK+ Y A Y EDVC GG+ F+ IFGA +E+F++KR+LMGPCW+ ++NP+ + SWCK+E +PK ITRL L E + P VVT+SL +KT+V+P+TH E+V++SA+ HR+V LD ASDES + M +RPLGQ+A G E FP D+ ++ S +P +Q MPNERALLS ++ DPDV+V HN G+D D+LLSR LK+ WSK
Sbjct: 239 METTEQQRYLDLFWIDASERNGVVFLFGKVEVKPQGDAAKGDKGGNNTKXXAQQSSFVSCCVMIHGNSRNLFVLPRRTG-----------GGENGDEPASLMDVHNEMKRVLQPRCIPKTEGAAWGGKVVKRKYAFHDPSVPREESQYLKVVYDAKYDVPDEDVCTGGGQHFEKIFGAGASTLENFIVKRRLMGPCWVRIKNPEASGVTRSWCKIECQVGTPKDITRLDLVEGIDRQQANRPPPP---------------------------VVTVSLKLKTIVNPKTHKSEIVSVSAIAHRKVLLDTASDESTRHMTQLSLLRPLGQAAAAGAGGGEAMAQFPTDLGRRIL------------SDMPQLQRMPNERALLSRLLAQMGVWDPDVIVGHNAWGYDMDVLLSRCAELKVKLWSK 610
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTL0_9STRA) HSP 1 Score: 249 bits (637), Expect = 1.680e-65 Identity = 164/430 (38.14%), Postives = 220/430 (51.16%), Query Frame = 1
Query: 1297 SEAPSTPAGSVASASSWLQKDETG-EFMRMFWLDATEQNGTIYLIGKVAVPSSSSGSASPQGDSGATMGTTFLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGGAKRADIGAVYQEMASVLVPRVIKRNAKGEQFRRPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK 2583
SE PA A+ S L+K+E G +RM+WLD TE+N +YL GK+ +P+ +A+P+ F+S C VH+++R++L LPR E DG+ A + V+ E+ +LVPRV+ A +PV RKYAF D SVPR E YLK+ Y A +PA ++CE GG Q IFG L E+FLIKR+LMGP W+TV+NP + P +W K+E PK+I R+ P P P +V ++L MKTVV P++ HE+V LSA+ HR V LD + L +RPLG SA + FPHD+ KAA + RA PNERALL+ F +L DPDV+V HN GFD ILL R + K+ WSK
Sbjct: 4 SETAVRPAAISATLESVLKKEEDGTSSLRMYWLDLTEKNHDLYLFGKIEIPAEEP-NAAPR----------FVSCCAIVHNLQRQLLCLPRPGE-DGEP--------------ASMQDVHAEVRKLLVPRVLPARAGCGFAAKPVTRKYAFEDPSVPRGEATYLKVVYDAKFPAPDPELCEQGGTFIQRIFGHSVGLTENFLIKRRLMGPGWVTVKNPFTTDVPSTWTKLEFHINDPKNIRRM-------PDPCPPVPP---------------------------LVAVTLKMKTVVHPKSSQHEIVCLSAICHRHVTLDKRPPPADAVTQLTL-VRPLGASAPPDALSHFPHDLDRHAKAAGGSVARA-----------PNERALLNRFMTQLGNWDPDVIVGHNAWGFDAQILLGRCLKNKVPGWSK 361
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA) HSP 1 Score: 247 bits (630), Expect = 3.350e-64 Identity = 155/406 (38.18%), Postives = 212/406 (52.22%), Query Frame = 1
Query: 1369 EFMRMFWLDATEQNGTIYLIGKVAVPSSSSGSASPQGDSGATMGTTFLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGGAKRADIGAVYQEMASVLVPRVIKRNAKGEQFRRPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRL-LAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK 2583
+++ MFWLDA+E+NG +YL GKV VP + G A Q + S CV + + +R + VLPR+ + D + S +ED +R I VY E+ SVL P I + +PV R YAF D S+PR+E QY+K+ Y A YP VC +GGKTF+ I GA +E+FLIKR+LMGP W+ + NPK SWCK E PKS+ RL L + A P + P V T+S+ KT V+P++H E+V +SAL + V++D A+D+S + M +RPL + FP D++ + K +Q PNERALLS F +L DPDVLV+HN G D D+LLSR V LK+ WSK
Sbjct: 377 QYIDMFWLDASERNGVVYLYGKVKVPIQTKGGAKQQKQ----QSFMYQSCCVTIPNNQRNLFVLPRI-KTDAKASTTEEDEENATVERYPISEVYGELKSVLQPSCIPHSHGATWGAKPVTRTYAFEDPSIPRDECQYMKVVYDAKYPVPDRHVCVAGGKTFEKILGAGASNLENFLIKRRLMGPGWVRIYNPKTPMGNASWCKWECTIDGPKSLQRLDLVTNRAGERVTIPESPP--------------------------VSTVSIKFKTAVNPKSHKLEIVCVSALFNSTVQIDAATDKSLRNMKQLTIVRPLNFETNGTMAQ-FPRDMEMEAKIMPE------------LQKSPNERALLSRLFAQLGSWDPDVLVSHNGWGHDIDVLLSRCVELKVGMWSK 738
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGZ8_AURAN) HSP 1 Score: 236 bits (601), Expect = 6.420e-61 Identity = 153/403 (37.97%), Postives = 213/403 (52.85%), Query Frame = 1
Query: 1381 MFWLDATEQNGTIYLIGKVAVPSSSSGSASPQGDSGATMGTTFLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGGAKRADIGAVYQEMASVLVPRVIKRNAKGEQFRRPVMRKYAFGDLSVPREE-TQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSAGEEYPKVFPHDIKHQVKAAEANARRAGRGSGVPIQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLAT-WSK 2583
M+WLD EQ+G+IYL+GKV + +G+ + SACV V +ER VLPR+ + G+ R + V+ E + LVPR + + A + + V R Y FGD SVPR++ T+YLK+KY + + P +C+ GG+ + I GA +E FL+KRKLMGPCWI V PK ++ VSWC VEV SPK+IT LA D P A P +V ++S+KTVV+P+TH HE+VA+SAL HR V +DGA+ + G+ GE+ P + +A +RR G+ + PNERAL+S +LQQ+DPDVLV HN++GF+ D+LL RA+HLKL WSK
Sbjct: 1 MYWLDVVEQSGSIYLVGKVKL----------EGED------AYASACVVVRDVERSFFVLPRVDPESGE--------------RYPMAKVWAETRAELVPRCVPKQAPFKC--KGVKRGYCFGDESVPRDDATEYLKVKYLSKFRPPPRGLCDRGGRVIEKILGAGATPLELFLVKRKLMGPCWIRVDKPKAHSPKVSWCAVEVEVASPKAIT--LARD-------CPYAAP-------------------------PLVCTTISLKTVVNPKTHQHEIVAVSALTHRGVGIDGATPDGGR---------------GEDERLFAPSP----GASHKAGSRRWTCGT---VTLAPNERALVSCLLSRLQQDDPDVLVGHNILGFELDVLLGRALHLKLGNAWSK 315
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Match: DNA (polymerase (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UP17_9STRA) HSP 1 Score: 221 bits (562), Expect = 3.620e-57 Identity = 135/363 (37.19%), Postives = 189/363 (52.07%), Query Frame = 1
Query: 1507 FLSACVAVHSIEREVLVLPRLVEKDGQDSDGDEDGGGGGAKRADIGAVYQEMAS-VLVPRVIKRNAKGEQFRRPVMRKYAFGDLSVPREETQ-YLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEDVASPSPAAPAATPGXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGKKMGAWLGIRPLGQSA-GEEYPKVFPHDIKHQVKAAEANARRAGRGSGVP-IQTMPNERALLSLFFHKLQQEDPDVLVAHNLMGFDFDILLSRAVHLKLATWSK 2583
+LS + V + R + VLP+ + DG D A++QE+ VL+ + + + V R YAFGD S+PR+ Q Y+K+KYPA YP +VC++GGK F I GA +E+F+IKRKLMGPCWI + NP+ N +SWCK+E+ PK I RL +P P P VV++S+ +KT+V P++H E+V++SA+ H V+L+ ASDE+ + M IRPLG +A G FP DI +++ + +P +Q MPNERALLS F +L DPDVL HN G+D ILL R V LK+ WSK
Sbjct: 45 YLSVSLLVTGMTRNLFVLPKPDDDDGN---------------VDFMALHQELNDKVLIGPCLPKTVGSTWAGKVVQRGYAFGDASIPRDTNQRYMKVKYPAKYPVPSLEVCQNGGKHFSRILGAGASNLENFIIKRKLMGPCWIRITNPRPNTVSLSWCKLELILDDPKQIQRLDLIQTGTPKPPPP------------------------------VVSVSIKLKTIVHPKSHKSEIVSISAICHNSVQLETASDENTRNMVQLSLIRPLGNAANGTNALPQFPRDIDSEIR------------TNMPQLQKMPNERALLSRFLAQLGMWDPDVLCGHNAWGWDLQILLCRCVELKVPLWSK 350 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig859.16709.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig859.16709.1 >prot_E_fasciculatus_S2_contig859.16709.1 ID=prot_E_fasciculatus_S2_contig859.16709.1|Name=mRNA_E_fasciculatus_S2_contig859.16709.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=910bp MSSTEERRTSARQRRVRPTAHSSALESLRAARDGLESRTEQHEDDDDEVYback to top mRNA from alignment at E_fasciculatus_S2_contig859:470..8449- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig859.16709.1 ID=mRNA_E_fasciculatus_S2_contig859.16709.1|Name=mRNA_E_fasciculatus_S2_contig859.16709.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7980bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig859:470..8449- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig859:470..8449- >mRNA_E_fasciculatus_S2_contig859.16709.1 ID=mRNA_E_fasciculatus_S2_contig859.16709.1|Name=mRNA_E_fasciculatus_S2_contig859.16709.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2730bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig859:470..8449- (Ectocarpus fasciculatus EfasUO2)back to top |