mRNA_E-fasciculatus_F_contig1007.77.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: D8LAU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU0_ECTSI) HSP 1 Score: 587 bits (1514), Expect = 3.610e-210 Identity = 275/327 (84.10%), Postives = 286/327 (87.46%), Query Frame = 1 Query: 148 LSTAGEEQQQAEEAQGAPIEVPSFELVAAPRIEGEGEGAHHIRYISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPWIMDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVEAWVPYYEKVVYEDMLVGTGLREWLRSLETKYGLVGNYMDVPDNVLETQMERSWSTMYYTNSEHCAPNCTFGGVAGATAVEALHQMWDEELESGIGYHKVDV 1128
+ST GEEQQ AEEA I VPSFE AAP+I+GEGEGAHHIRYISVVAERHSGSRW TGFL EYFRD+DVMVT TLCTWKHWFQDRIHQDVQDGKR CR +QQCPACLDTEHTLVVV+WRNPYDWISGMHSNPHH+KAHRGVQDLEQFMTMPWIM PE PC+DNFLPNEVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVE WVP+YEKVVYEDMLVG GLR+WLRSLETKYGLVGNYMDVPDNVL+T M R W MYYTNSEHCAPNCT GGV GATAVEALHQMWDEELESGIGYHKVDV
Sbjct: 1 MSTVGEEQQPAEEAPNTSIGVPSFEHAAAPQIKGEGEGAHHIRYISVVAERHSGSRWFTGFLREYFRDKDVMVTPTLCTWKHWFQDRIHQDVQDGKRPCRGNQQCPACLDTEHTLVVVMWRNPYDWISGMHSNPHHAKAHRGVQDLEQFMTMPWIMGPEL----------------PCIDNFLPNEVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVETWVPFYEKVVYEDMLVGPGLRDWLRSLETKYGLVGNYMDVPDNVLQTNMARLWRNMYYTNSEHCAPNCTMGGVTGATAVEALHQMWDEELESGIGYHKVDV 311
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: D8LAT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT9_ECTSI) HSP 1 Score: 545 bits (1404), Expect = 2.270e-193 Identity = 251/300 (83.67%), Postives = 264/300 (88.00%), Query Frame = 1 Query: 229 AAPRIEGEGEGAHHIRYISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPWIMDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVEAWVPYYEKVVYEDMLVGTGLREWLRSLETKYGLVGNYMDVPDNVLETQMERSWSTMYYTNSEHCAPNCTFGGVAGATAVEALHQMWDEELESGIGYHKVDV 1128
AAP+I+GEG+ AHHIRYISVV+ERHSG WMT FL EYFRD+DVMVT TLCTWKHWFQDRIHQDVQDGKR CR +QQCPACLDTEHTLVVV+WRNPYDWI GMHSNPHH+KAHRGVQDLEQFMTMPWIM PE PC+DNFLPNEVLPCKEN RSSIYELDRDGRAYGNIYELRKAKILDFNAVE WVP+YEKVVYEDMLVG GLR+WLRSLETKYGLVGNYMDVPDNVL+T M R WS MYYTNSEHCAPNCT GGV GATAVEALHQMWDEELESGIGY+KVDV
Sbjct: 31 AAPQIKGEGDRAHHIRYISVVSERHSGFTWMTSFLWEYFRDKDVMVTPTLCTWKHWFQDRIHQDVQDGKRPCRGNQQCPACLDTEHTLVVVMWRNPYDWIGGMHSNPHHAKAHRGVQDLEQFMTMPWIMGPEL----------------PCIDNFLPNEVLPCKENGRSSIYELDRDGRAYGNIYELRKAKILDFNAVETWVPFYEKVVYEDMLVGPGLRDWLRSLETKYGLVGNYMDVPDNVLQTNMARLWSNMYYTNSEHCAPNCTMGGVTGATAVEALHQMWDEELESGIGYNKVDV 314
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: A0A6H5LNE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNE9_9PHAE) HSP 1 Score: 425 bits (1093), Expect = 3.660e-145 Identity = 184/290 (63.45%), Postives = 229/290 (78.97%), Query Frame = 1 Query: 253 GEGAHHIRYISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPWIMDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVEAWVPYYEKVVYEDMLVGTGLREWLRSLETKYGLVGNYMDVPDNVLETQMERSWSTMYYTNSEHCAPNCTFGGVAGATAVEALHQMWDEELESGIGYHKV 1122
G G I+YIS++ ERHSG+ WM FL +YFRD+D+ VT+TLCTWKHWFQDRI+QD+QDGKR CRE QQCPAC D HTLVV +WRNPYDW+SGMH P H++AH + D+ +FMTMPWIM E E++ARK+AL++ ++E PC+DNFLP EVLPC+ D S+IYELD G AYGNIYELRKAKI DF+AV+ W PYYEK++YEDML GL+ WL SL+T YGL GNY VPD+ L +ME S MYY NS+HCAP+C GGVAG +A+E ++++WDEELE +GYH+V
Sbjct: 94 GVGPLKIKYISLIGERHSGTTWMVKFLQDYFRDKDITVTATLCTWKHWFQDRIYQDIQDGKRLCREGQQCPACKDINHTLVVAMWRNPYDWVSGMHKIPWHAQAHASIPDMSKFMTMPWIMGAEEEKQARKEALIRTKDELPCIDNFLPWEVLPCRPGDESAIYELDPGGEAYGNIYELRKAKIRDFDAVKMWAPYYEKILYEDMLAKDGLKMWLMSLDTLYGLGGNYKSVPDSALAVKMESSRKQMYYMNSQHCAPHCKMGGVAGRSALETMNRLWDEELEEDLGYHQV 383
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: D7FTA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA1_ECTSI) HSP 1 Score: 350 bits (897), Expect = 1.780e-117 Identity = 170/262 (64.89%), Postives = 188/262 (71.76%), Query Frame = 1 Query: 229 AAPRIEG--EGEGAHHIRYISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPWIMDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVEAWVPYYEKVVYEDMLVGTGLREWLRSLETKYGLVGNYMDVPDNVLETQMERSWSTMYYTNS 1008
AAP+IEG EGEG HHI+YIS++AERHSGS WMTGFL YFR DV VT TLCTWKHWFQDRIHQD+QDGKR CRE QQCPACLDTEHTLVV +WRNPYDWISGM SNPHH+KAHRGVQDL ++MTMPWIM P+ E+RARKDAL+KA+EE AKILDFNAVE WVP+YEK+ EDML G L +WLRSLETKYGLVGNY+DV D+ L M S S MYYTNS
Sbjct: 10 AAPQIEGGGEGEGPHHIKYISLIAERHSGSTWMTGFLSRYFRHSDVKVTPTLCTWKHWFQDRIHQDIQDGKRPCREHQQCPACLDTEHTLVVAMWRNPYDWISGMQSNPHHAKAHRGVQDLSEYMTMPWIMQPKNEERARKDALIKAKEE-----------------------------------------AKILDFNAVETWVPFYEKIADEDMLDGETLGDWLRSLETKYGLVGNYIDVLDSALGESMAHSRSHMYYTNS 230
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: D8LB15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB15_ECTSI) HSP 1 Score: 201 bits (511), Expect = 5.060e-60 Identity = 83/130 (63.85%), Postives = 99/130 (76.15%), Query Frame = 1 Query: 253 GEGAHHIRYISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPWIMDPEAEQRAR 642
G G I+YIS++ ERHSG+ WM FL +YFRD+D+ VT+TLCTWKHWFQDRI+QD+ DGKR CRE QQCPAC D HTLVV +WRNPYDWISGMH P H++AH + D+ +FMTMPWIM E R
Sbjct: 4 GVGPLEIKYISLIGERHSGTTWMVKFLQDYFRDKDITVTATLCTWKHWFQDRIYQDIHDGKRPCREGQQCPACKDINHTLVVAMWRNPYDWISGMHKIPWHAQAHASIPDMSKFMTMPWIMGAEVRDHRR 133
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: A0A7S0G6T5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G6T5_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.590e-22 Identity = 69/235 (29.36%), Postives = 113/235 (48.09%), Query Frame = 1 Query: 280 ISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPWIMDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPCKE------------NDRSSIYELDRDG--RAYGNIYELRKAKILDFNAVEAW--VPYYEKVVYEDMLV-GTGLREWLRSLETKYGLVGN 933
IS++ ER++G+ W+T L + F + ++ L WKHWFQD D + +R + TLV+ ++RNPY+W+ M PHHS +H ++ + F+T PW M R D + + C + F +V+ C+ + IYE+ DG + + NI E+R AKI + V+ W + V YED+L GTG ++++LE G+ +
Sbjct: 59 ISLLGERNTGTNWVTALLSKCF--PGIKTSARLVRWKHWFQD---DDSNENER--------------QKTLVIAMFRNPYEWVMAMRKTPHHSPSHLRLK-WQNFVTKPWTMT-----RPESDLVFSNSTGQICHEKFAYKDVISCQRQPPELMSSTGGYSSGKPIYEMRHDGSGKPFANILEMRAAKIHNHLGVQEWPWISGVHVVRYEDLLEDGTG--NFIKNLEKLTGVTAS 266
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: A0A7S2U9S4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9S4_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.160e-20 Identity = 72/217 (33.18%), Postives = 103/217 (47.47%), Query Frame = 1 Query: 271 IRYISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAH-RGVQDLEQFMTMPWIMDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPCKEN-------DRSS--------IYELDRDG--RAYGNIYELRKAKILDF-------NAVEAWVPYYE 846
IR IS+V ER+SG+ WMT + + F D ++ V + +KH FQ H +V E TLV+V+ RNPY+WI M PHH+ +H R + ++F+ PW + R D + E R C NF NE+ C E D++S YE+ +DG + + NI E+R AKIL+F N AW +YE
Sbjct: 95 IRKISIVGERNSGTTWMTSHMQDCFND-NIWVDNHFTRYKHHFQ-FDHPEVV-----------------PESTLVLVIHRNPYEWILSMRKRPHHAPSHIRKENEWQEFLETPWTTN-----RTDLDMTLANETGRICQQNFTFNEINSCLERPHPEGSYDKNSSQWSNHTPFYEMRQDGSGQPFNNILEMRSAKILNFLELENYQNTYAAWHYHYE 287
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: A0A7S1Y240_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y240_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 7.800e-20 Identity = 69/208 (33.17%), Postives = 99/208 (47.60%), Query Frame = 1 Query: 271 IRYISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPWI-----MDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPCK--ENDRSSIYEL--DRDGRAYGNIYELRKAKILDFNAV-------EAWVPYYE 846
I+ IS++ ER+SG+RW+ G LG F ++ + V L +KHWFQ + + P TLV+ +RNPYDW+ + + PHHS AH G++ E+F+T PW +D + R +E CV LP E K ++ YEL D G +GNI E+R AKI +F V + W YE
Sbjct: 99 IQQISILGERNSGTRWLYGHLGSCF-NQSLGVKRYLTRYKHWFQ-------------YKNTTKYP-----HDTLVIASFRNPYDWLEALRNVPHHSPAHIGLK-WEEFLTKPWTTERVGLDLNISKAVRCQEDFPYDEIVSCVLEPLPKEAFDHKLRYSENQPFYELKPDGSGEPFGNIMEMRAAKIRNFLGVRDYPGVADVWTVQYE 286
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: B8BQL9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQL9_THAPS) HSP 1 Score: 98.6 bits (244), Expect = 1.140e-18 Identity = 71/232 (30.60%), Postives = 105/232 (45.26%), Query Frame = 1 Query: 226 VAAPRIEGEGEGAHHIRYISVVAERHSGSRWMTGFLGEYFRDEDVM----------------------VTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPW-----IMDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPCKENDRSSI-------YEL--DRDGRAYGNIYELRKAKILDF 813
VAAP G A + I+++ ERHSG+ W+T L + F D+ + V + +KHWFQ + VQD + T+V+ ++R+PYDW++ MH PHH+ H + F+T PW I D + A V A+ E C+ N+ NE++PC D + YEL D GRAY +I +LR+ KIL+F
Sbjct: 522 VAAPS-NANGGKATGVTSITLIGERHSGTNWITDHLNDCFGDDLISDGDSPGESTHIGLSFLQNLISKVKVSYARFKHWFQ-FDYTAVQD-----------------KSTVVIAMFRDPYDWVAAMHERPHHAHKHMNLH-WRDFVTRPWRGPRGIADYNLLKAAGGYEEVNAQVETKCLCNYTWNEIIPCSVKDSVLVEGFGMYMYELMPDGSGRAYPSIVDLRRDKILNF 733
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Match: A0A7S1VY01_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY01_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.650e-18 Identity = 69/239 (28.87%), Postives = 109/239 (45.61%), Query Frame = 1 Query: 280 ISVVAERHSGSRWMTGFLGEYFRDEDVMVTSTLCTWKHWFQDRIHQDVQDGKRHCREDQQCPACLDTEHTLVVVLWRNPYDWISGMHSNPHHSKAHRGVQDLEQFMTMPWIMDPEAEQRARKDALVKAEEERPCVDNFLPNEVLPC---------------KENDRSSIYELDRDGRA--YGNIYELRKAKILDFNAV-------EAWVPYYEKVVYEDMLVGTGLREWLRSLETKYGL 924
++++ ER SG+ W+ L E F + V + L +KHWFQ ED P+ ++LV+ ++RNPYDW+ MH PHHS +H + ++F+T W + R D + + C +NF +EV+ C + ++ +YEL DG Y NI ELR AK ++F V + WV YE ++ E G ++LR +E G+
Sbjct: 191 VAILGERSSGTTWIYEHLTECF-NHSVPIKRRLNRYKHWFQ---------------EDSNYPS-----NSLVIAIFRNPYDWMEAMHRVPHHSPSHMDLS-WKEFLTKTWTTE-----RVGHDLNITDTKSVVCQENFQYHEVVSCIHKPMGQEYWEGKKTRFSEHQPVYELKHDGSGEPYDNIMELRAAKNVNFMEVKDFKRITDFWVYKYESLLKE------GTEDFLRRIEEATGV 396 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1007.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1007.77.1 >prot_E-fasciculatus_F_contig1007.77.1 ID=prot_E-fasciculatus_F_contig1007.77.1|Name=mRNA_E-fasciculatus_F_contig1007.77.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=377bp ERSNCYLQATSVRMVNLVSRSAVGVVLALCAMHMTSPRAAKVRCAAAINLback to top mRNA from alignment at E-fasciculatus_F_contig1007:14891..19903- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1007.77.1 ID=mRNA_E-fasciculatus_F_contig1007.77.1|Name=mRNA_E-fasciculatus_F_contig1007.77.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5013bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1007:14891..19903- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1007:14891..19903- >mRNA_E-fasciculatus_F_contig1007.77.1 ID=mRNA_E-fasciculatus_F_contig1007.77.1|Name=mRNA_E-fasciculatus_F_contig1007.77.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2262bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1007:14891..19903- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |