prot_E_fasciculatus_S2_contig8581.16704.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8581.16704.1
Unique Nameprot_E_fasciculatus_S2_contig8581.16704.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length186
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8581.16704.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 1.650e-47
Identity = 144/199 (72.36%), Postives = 147/199 (73.87%), Query Frame = 0 
Query:    1 MSRLPSLRLSASELVEQLQAESSPSPRMPTTPASGSRGRFRSXXXXXXXX---------SNKFLSSTFSPSRSTGXXXXXXG-TTPSTLSPQRNNMRSRTESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRARPPAAAAXXXXXXX---EGLEEAEEAPYSPGPSGGVAGAGADLARRFFFGATAET 186
            MSRLPSLRLSASELVEQLQAESSPSPRMPT PASGSRGRFRS                 +NKFLSSTFSPSRSTG      G TTPSTLSPQRNN RSR    XXXXXX              XXXXXXXXXXXXXXXXX +R RPP+AAA   XXXX   EGLEEAEEAPYSPGPSGGVAGAGADLARRFFFGATAET
Sbjct: 2112 MSRLPSLRLSASELVEQLQAESSPSPRMPTAPASGSRGRFRSPGSTPHNAGTGTAAGSSNNKFLSSTFSPSRSTGVGGGGSGRTTPSTLSPQRNNTRSRXXXXXXXXXXVVSTGTLGPGSVFGXXXXXXXXXXXXXXXXXLVRGRPPSAAAGAAXXXXXXXEGLEEAEEAPYSPGPSGGVAGAGADLARRFFFGATAET 2310
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BLAST of mRNA_E_fasciculatus_S2_contig8581.16704.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.310e-43
Identity = 132/201 (65.67%), Postives = 137/201 (68.16%), Query Frame = 0 
Query:    1 MSRLPSLRLSASELVEQLQAESSPSPRMPTTPASGSRGRFRSXXXXXXXX---------SNKFLSSTFSPSRSTGXXXXXXG--TTPSTLSPQRNNMRSRTESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IRARPPAAAAXXXXXXXEG----LEEAEEAPYSPGPSGGVAGAGADLARRFFFGATAE 185
            +SRLPSLRLSASELVEQLQAESSPSPRMPTTPASGSRGRFRS                 +NKFLSSTFSPSRSTGXXXXXX   TTPSTLSPQRN+MRSRTES XXXXXXX                                +R R P+AAA   XXXX      LEEAEEAPYSPGPSGGVAGAGADLARRFFFGATAE
Sbjct: 2164 VSRLPSLRLSASELVEQLQAESSPSPRMPTTPASGSRGRFRSPGTTPHNPGTGTAAGSSNNKFLSSTFSPSRSTGXXXXXXSGRTTPSTLSPQRNHMRSRTESXXXXXXXXVVSTGTLGPGSVFGSGGRGRSMDAELSPRQPLVRGRLPSAAAGAGXXXXXXXXXXLEEAEEAPYSPGPSGGVAGAGADLARRFFFGATAE 2364
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8581.16704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB83_ECTSI1.650e-4772.36WD-40 repeat protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KB05_9PHAE1.310e-4365.67UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8581contigE_fasciculatus_S2_contig8581:1615..3137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8581.16704.1mRNA_E_fasciculatus_S2_contig8581.16704.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8581 1615..3137 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8581.16704.1 ID=prot_E_fasciculatus_S2_contig8581.16704.1|Name=mRNA_E_fasciculatus_S2_contig8581.16704.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=186bp
MSRLPSLRLSASELVEQLQAESSPSPRMPTTPASGSRGRFRSPGTGTGAG
SNKFLSSTFSPSRSTGGGGGSGGTTPSTLSPQRNNMRSRTESPGGGGVVS
AGSTLGPGSMFGSGGGRGRLMEAELSPRRPLIRARPPAAAAAAAAASGEG
LEEAEEAPYSPGPSGGVAGAGADLARRFFFGATAET
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