prot_E_fasciculatus_S2_contig858.16703.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig858.16703.1
Unique Nameprot_E_fasciculatus_S2_contig858.16703.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length1505
Homology
BLAST of mRNA_E_fasciculatus_S2_contig858.16703.1 vs. uniprot
Match: D7FZZ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ9_ECTSI)

HSP 1 Score: 598 bits (1541), Expect = 1.570e-195
Identity = 361/394 (91.62%), Postives = 372/394 (94.42%), Query Frame = 0
Query:    1 MRASPNAVVSHDRDLETAEDDDDEPFTPDDPAVVREQNLRALLVLLPAKLMNGVIKSAMEGAMLHTRRTATADAEKRRRLLLSSRAQFRHTTQKTSQGDMKHKDGDGLDDETEAGPAVAGKTFDSAETPDSWRNTTTQERDSIVGHKLNEVLRVLYSTSTEEARVTMRAIYLSSQGIGAAGAQQLAPALKDCVIVALHLGNNALGDKGLISLADGLRHARGLQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIYLSQPGCPLRSLSLAGCLDVDPAAWKTINVRGKDGMGWDPPRPGDDGAVSLAAALVSPHGCPLRRLRMANAGMKTIGAKAIATALCANRTLETVDVSGNDFGSTTDESAWESAADLLSFGLQAS 394
            MRASP+AVV+H++ LET E DD+EPFTPDDPAVVREQNLRALLVLLPAKLMNGVIK+AMEGAMLHTRRTATADAEKRRRLLLSSRAQFRHT +K  QGDMKHKDGDG DDETE GP   G+T DSAETPDS RNTTTQERD+IVGHKL EVLRVLYSTSTEEARVTMRAIYLSSQGIGAAGAQQLAPALKDCVIVALHLGNNALGDKGL SLADGLRHARGLQK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AIYLSQ GCPLRSLSLAGCLDVDPAAWKTINVRGK+GM WDPPRPGDDGAVSLAAAL+SPHGCPLRRLRMANAGMKTIGAKAIATALCANRTLETVDVSGNDFGSTTD SAWESAADLLSFGLQAS
Sbjct:  108 MRASPDAVVAHNKALETTEGDDEEPFTPDDPAVVREQNLRALLVLLPAKLMNGVIKAAMEGAMLHTRRTATADAEKRRRLLLSSRAQFRHTAKKNCQGDMKHKDGDGFDDETEEGPTAEGETVDSAETPDSRRNTTTQERDTIVGHKLQEVLRVLYSTSTEEARVTMRAIYLSSQGIGAAGAQQLAPALKDCVIVALHLGNNALGDKGLCSLADGLRHARGLQKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLAIYLSQQGCPLRSLSLAGCLDVDPAAWKTINVRGKEGMRWDPPRPGDDGAVSLAAALISPHGCPLRRLRMANAGMKTIGAKAIATALCANRTLETVDVSGNDFGSTTDASAWESAADLLSFGLQAS 501          
BLAST of mRNA_E_fasciculatus_S2_contig858.16703.1 vs. uniprot
Match: D7FZZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ8_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 2.760e-96
Identity = 186/310 (60.00%), Postives = 202/310 (65.16%), Query Frame = 0
Query: 1069 DMGHGLVLPGSNEATTRARTAPSVGLTADNTRLHGKLSFDHLSSSNERAPVVVEGEPGLRGDTCKDETGAHIPNVTDDGGIHATGGGATNGDGRQQQHARPASSERGETQSGRWEEGAGTERVMPLHADEAWVGAGPIIEATGDKIPNDKMNTNALLAHTQSPMEAEEMRRLSEGYFEANQEHMNAVARRESPHVKRALALIRDHGDIIRLKEKRTPEADMHRDKLVQGRPRSKRRPRGETPLLGVQLNDGIALGAEIAMLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDARNILQREKHRAHMVY 1378
            DMGHG+VLPGSNEA TRARTAPSV  TADNTRLHGKLS+D LSSS+ERAP V EG PGLRGD C+D  G HIPNVT DGGI   GGGA NGDGRQ+QHAR AS+ERGETQSGR EEGAGT+RV+PLH DEA VGA PI EATGD  PN K++TNA  AHT+SPMEAEE++RLSE Y EA QE++NAV                                                                           GSGEEDEEGN ILPEIDDRFLTVGQRLRRLRDAR+ LQREKHRAHM Y
Sbjct:    4 DMGHGIVLPGSNEAATRARTAPSVRSTADNTRLHGKLSYDDLSSSSERAPAVTEGTPGLRGDACRDGPGVHIPNVTGDGGIDPKGGGAKNGDGRQEQHARRASAERGETQSGRREEGAGTDRVIPLHTDEAMVGADPISEATGDTTPNHKISTNAF-AHTKSPMEAEEVQRLSEAYSEATQEYLNAV---------------------------------------------------------------------------GSGEEDEEGNRILPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHMKY 237          
BLAST of mRNA_E_fasciculatus_S2_contig858.16703.1 vs. uniprot
Match: A0A6H5KJE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE5_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 8.630e-90
Identity = 160/177 (90.40%), Postives = 169/177 (95.48%), Query Frame = 0
Query: 1328 MLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDARNILQREKHRAHMVYSRQMKRNLRERKRFVLAEKRAGRIAKTMDTKQLMEALKERGYETEGSEQLDQLRRVYIEGIQPEIRVRLHATSRWTKSRNKHRERTDTVEVGEIVARRQQLTSSKQATPFSPSPFTRHNVRHAATV 1504
            MLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDAR+ L+REK RAH+ YSRQ+K NLRERKRFVLAEKRAGRIAK+MDTKQL+EALKERGY T+GSEQLDQLRRV+IEGIQPEIRVRLHATSRWTKSRNKHRERTDTVEVGEIVARRQQLTSSK+ TPFSPSP TR NVRHAATV
Sbjct:    1 MLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDARDNLEREKQRAHLEYSRQVKSNLRERKRFVLAEKRAGRIAKSMDTKQLVEALKERGYATKGSEQLDQLRRVFIEGIQPEIRVRLHATSRWTKSRNKHRERTDTVEVGEIVARRQQLTSSKRVTPFSPSPITRLNVRHAATV 177          
BLAST of mRNA_E_fasciculatus_S2_contig858.16703.1 vs. uniprot
Match: A0A836CKC6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC6_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.600e-15
Identity = 72/200 (36.00%), Postives = 88/200 (44.00%), Query Frame = 0
Query:  313 PGDDGAVSLAAALVSPHGCPLRRLRMANAGMKTIGAKAIATALCANRTLETVDVSGNDFGSTTDESAWESAADLLSFGLQASCSFRSSLP--------------------VHTILLRACGLSREQVLAIQANTSPQITTVGKTRRQEESKEEARSDEGDGGGSMNNPLPWREEKRLGFRAACLREWLLDAARLQGMRYPR 492
            PGD+GAV LAAAL+SPHGC L+RLR+ NA +   G +AIA AL     LE +D+SGND          ++AA LL     A+                            + ++ LRACGLS  Q+      T                        G        PL W EEKRLG   A LR WLLDAA  +G  YPR
Sbjct:  377 PGDEGAVCLAAALLSPHGCALQRLRLVNARLGAAGVRAIAAALHCRSALEELDLSGNDLSDV------DTAALLLRAIRVAAXXXXXXXXXXXXXXXXXXXXXXXXXEGRLRSVALRACGLSGAQLAEAARLT------------------------GAAXXXXXXPLTWAEEKRLGAEGAALRAWLLDAAAGKGFEYPR 546          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig858.16703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FZZ9_ECTSI1.570e-19591.62Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FZZ8_ECTSI2.760e-9660.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJE5_9PHAE8.630e-9090.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKC6_9STRA1.600e-1536.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 820..844
NoneNo IPR availableCOILSCoilCoilcoord: 1043..1063
NoneNo IPR availableCOILSCoilCoilcoord: 929..956
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 192..218
e-value: 0.031
score: 23.4
coord: 164..191
e-value: 0.73
score: 18.1
coord: 330..357
e-value: 26.0
score: 7.2
coord: 247..274
e-value: 3.9
score: 12.9
coord: 219..246
e-value: 0.038
score: 23.1
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 153..288
coord: 314..375
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 167..376
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 221..241
e-value: 0.11
score: 12.6
coord: 194..213
e-value: 0.38
score: 10.9
coord: 358..372
e-value: 0.48
score: 10.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 312..432
e-value: 3.3E-10
score: 41.4
coord: 147..291
e-value: 1.9E-25
score: 91.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig858contigE_fasciculatus_S2_contig858:8820..22105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig858.16703.1mRNA_E_fasciculatus_S2_contig858.16703.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig858 7915..22398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig858.16703.1 ID=prot_E_fasciculatus_S2_contig858.16703.1|Name=mRNA_E_fasciculatus_S2_contig858.16703.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1505bp
MRASPNAVVSHDRDLETAEDDDDEPFTPDDPAVVREQNLRALLVLLPAKL
MNGVIKSAMEGAMLHTRRTATADAEKRRRLLLSSRAQFRHTTQKTSQGDM
KHKDGDGLDDETEAGPAVAGKTFDSAETPDSWRNTTTQERDSIVGHKLNE
VLRVLYSTSTEEARVTMRAIYLSSQGIGAAGAQQLAPALKDCVIVALHLG
NNALGDKGLISLADGLRHARGLQKLHLNDNEITDVGCHSLANSLGPLKVL
STLDLCHNPFGDKACLSLAIYLSQPGCPLRSLSLAGCLDVDPAAWKTINV
RGKDGMGWDPPRPGDDGAVSLAAALVSPHGCPLRRLRMANAGMKTIGAKA
IATALCANRTLETVDVSGNDFGSTTDESAWESAADLLSFGLQASCSFRSS
LPVHTILLRACGLSREQVLAIQANTSPQITTVGKTRRQEESKEEARSDEG
DGGGSMNNPLPWREEKRLGFRAACLREWLLDAARLQGMRYPRPLSPDPND
TTAPVEPNCGGRNGNGSLALVASDDPNVLRTRNSSSYGEDRDRSLVEPQL
WSSVMALRRLVASCESGMPLPRGMSNTDHIAVGESASDYRGRQTIRLSQG
LETKDEKRSDGGALHRESVDTSAVLDRDGGTTVVTDEARPPTRPNSLTER
GRASKSQPRSASKPILSPPISSRESCSRGVNETSLSEIRDNSRRDPSSET
LRSAGSEDGELRGDVIENQSEPAVRSSKSETDISVLSGELRYQEGSKGEE
GSPGQNVTGGDARAEGQDQWPSGQWSCPSAPTIYSLCGGDTRLIRAADLE
AAAEEGRTLGLFALAKSLDMDEEEAALSRERQSLRQQREEFGERTQADVL
SLEASLANARDLRNAAGDSVRRLEPIARAARKSERVVEVELRGQQKETET
TTCSFVDRVDLERDLQERADHAEGMGNELRGARGRFEAAERRINELEAEE
RGLRSRLSVYDTTFRKTTADISSAMAVLIAKRNALRRTEKTVVDVASKLR
KLAKIASDEEALRAVVPAGSDRRDLDLQVAEAVRITSEAAREVEETKLRR
DEAEVALEEARWNLSGRVDMGHGLVLPGSNEATTRARTAPSVGLTADNTR
LHGKLSFDHLSSSNERAPVVVEGEPGLRGDTCKDETGAHIPNVTDDGGIH
ATGGGATNGDGRQQQHARPASSERGETQSGRWEEGAGTERVMPLHADEAW
VGAGPIIEATGDKIPNDKMNTNALLAHTQSPMEAEEMRRLSEGYFEANQE
HMNAVARRESPHVKRALALIRDHGDIIRLKEKRTPEADMHRDKLVQGRPR
SKRRPRGETPLLGVQLNDGIALGAEIAMLRGSGEEDEEGNPILPEIDDRF
LTVGQRLRRLRDARNILQREKHRAHMVYSRQMKRNLRERKRFVLAEKRAG
RIAKTMDTKQLMEALKERGYETEGSEQLDQLRRVYIEGIQPEIRVRLHAT
SRWTKSRNKHRERTDTVEVGEIVARRQQLTSSKQATPFSPSPFTRHNVRH
AATV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt