|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8572.16698.1 vs.
Match: alpha-1,2-Mannosidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV0_ECTSI) HSP 1 Score: 550 bits (1418), Expect = 9.060e-183 Identity = 372/642 (57.94%), Postives = 404/642 (62.93%), Query Frame = 1
Query: 1 VSCFLVGGRAAWVVIASGGGGEAQQSAQFGQSTAQTVFLEEVGLIEVISTGHNNFVLHHPDTGEVLEISPIFDALGGAGVPGGADAGAMQISSFVRSRPQRRQQEPXXXXXXXXXXXXXXXXGAGQATADDGRKEKAQKQGGVSAVANQQRLLEDDDGLEGSRGRAETEAPVTVRGMXXXXXXXXXXXXXXXXXXXXXXXXXX-GARTAGEAAAPTPAP-VVSGTAIDDGEEYEKEEVERDEERGERGQDGELEGED-GGAGEGLHRSRHGAGDQHT-GGSGRQNRRVRRRPAQRRTFIVTKEAKIAEAAGAVGLVVINNEPGGVTLTMPGASNAGVYDDEXXXXXXXXGGSDVRGNGVSIPVAMVGLEDGVEIMKILSAAATAGVDEEVHMQ--------------GVLDARTLHDSVLSRLVEEQKEGLRDNRGSLLPAAAAA-GCSGSSGGDDSGSRHACSGSGSPTPPRESWQGAGG--DXXXXSGGGKVADDRFPSRDNGNGAGKIPAADTVLQDVGSSG---GGIDVVGEGAGDEARSDVDGPFGAAADAGTGAMPNRGGQGEDRSPVEEAVXXXXXXVEGDDDSSTQKDSDGDRDSGNNPFPFLSSGFDEATLGGMRLPPFPLPRAVVGDGYVQV 1854
V +VGGRAAWV QFGQ+T QTVFLEEVGLIEV+S GHNN+VLHHP + E GAGQAT DD +KEKAQ+QG VS VANQQR ++DDDGLEGSRGRAET+AP T R M GARTAG+AAAP PAP V+SGTAID EEYEKE VE E ER + GEL GE+ GGA EGL R+ G GDQHT GGSGRQ+RRVRRRPAQRRTFIVTKEA IAEAAGAVGLVVINNEPGGVTLTMPGASNAGVYDD+ GG V+G+GV+IPVAMVGLEDGVEIMKILSAAATAGVDEEV +Q GVLDART+HDSV SRL+EEQK+GLRD+RGSLLPAAAAA GCS +SGGDDSG R AC GSGSPTPPRESW+ AGG D S G VADD FPS DNG GAG+IPAAD LQDVGSSG VG A DEAR VDGP AAADAGTGAMP+RG GE R+PV+E V +EATLGGMRLPPF LPRAVVGDGYVQV
Sbjct: 274 VDTLVVGGRAAWVXXXXXXXXXXXXXEQFGQTTTQTVFLEEVGLIEVLSAGHNNYVLHHPASEEA---------------------------------------------------------GAGQATTDDVQKEKAQEQGDVSDVANQQRSVDDDDGLEGSRGRAETKAPATGREMDDDGVTGTRRASEEEEKELEVRVPGSEGARTAGDAAAPAPAPAVISGTAIDKEEEYEKEAVEEXXEGIERRRGGELGGEEAGGADEGLDRNPRGHGDQHTAGGSGRQDRRVRRRPAQRRTFIVTKEANIAEAAGAVGLVVINNEPGGVTLTMPGASNAGVYDDDGDDEEQGDGG--VQGSGVNIPVAMVGLEDGVEIMKILSAAATAGVDEEVSIQVSSGRRSSEIWSEQGVLDARTMHDSVFSRLMEEQKQGLRDSRGSLLPAAAAAAGCSRNSGGDDSGRRDACRGSGSPTPPRESWRSAGGVGDASGDSDDGTVADDSFPSGDNGKGAGRIPAADASLQDVGSSGVXXXXXXAVGGDAEDEARPVVDGPSAAAADAGTGAMPDRGWGGEGRAPVDEEV-------------------------------------EEATLGGMRLPPFSLPRAVVGDGYVQV 819
BLAST of mRNA_E_fasciculatus_S2_contig8572.16698.1 vs.
Match: PA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG5_9PHAE) HSP 1 Score: 546 bits (1406), Expect = 4.660e-181 Identity = 413/801 (51.56%), Postives = 443/801 (55.31%), Query Frame = 1
Query: 1 VSCFLVGGRAAWVVIASGGGGEAQQSAQFGQSTAQTVFLEEVGLIEVISTGHNNFVLHHPDTGEVLEISPIFDALGGAGVPGGADAGAMQISSFVRSRPQRRQQEPXXXXXXXXXXXXXXXXGAGQATADDGRKEKAQKQGGVSAVANQQRLLEDDDGLEGSRGRAETEAPVTVRGMXXXXXXXXXXXXXXXXXXXXXXXXXXG-ARTAGEAAAPTPAPVVSGTAIDDGEEYEKEEVERDEERGERGQDGELEGED-GGAGEGLHRSRHGAGDQHTGG-SGRQNRRVRRRPAQRRTFIVTKE----------------------------------------------------------------------------------------------------------------------------------------------------------------------AKIAEAAGAVGLVVINNEPGGVTLTMPGASNAGVYDDEXXXXXXXXGGSDVRGNGVSIPVAMVGLEDGVEIMKILSAAATAGVDEEVHMQGVLDARTLHDSVLSRLVEEQKEGLRDNRGSLLPAAAAAGCSGSSGGDDSGSRHACSGSGSPTPPRESWQGAGG--DXXXXSGGGKVADDRFPSRDNGNGAGKIPAADTVLQDVGSSGGGID---VVGEGAGDEARSDVDGPFGAAADAGTGAMPNRGGQGEDRSPVEEAVXXXXXXVEGDDDSSTQKDSDGDRD---------SGNNPFPFLSSGFDEATLGGMRLPPFPLPRAVVGDGYVQV 1854
V +VGGRAAWVVIA+ QQSAQFGQ+T QTVFLEEVGLIEV+S GHNN+VLHHP TGEVLEISPIFDALGG+GVPGG D GAMQISSFVR RPQ XXXXXXXX GAGQAT DD RKEKAQ+QG VS VANQQR +EDD GLEGSRGRAE +AP T R M G ARTAG Q GE EGE+ GG EGL R+ HG G QHTGG SGRQ+RRVRRRP QRRTFIVTKE A++AEAAGAVGLVVINNEPGGVTL MPGASNAG+ DD XXXXXX GG V+G+GV+IPVAMVGLEDGVEIMK+LSAAATAGVDEE HMQGVLDART+HDSV SRL+EEQK+GLRD+RGSLLPAAA G SGSSGGD SGSR ACSGSGSPTPPRESW+ AGG D SG G AD RFPS DNG GAG+IPAADT LQD GSSG G VG G GDEAR VDGP AAADAGTGAMP++G E R+PVEE V VEG+ S + SGNN F FLSSGFDEATLGGMRLPPF LPRA VGDGYVQV
Sbjct: 31 VDTLVVGGRAAWVVIANXXXXXVQQSAQFGQTTTQTVFLEEVGLIEVLSAGHNNYVLHHPATGEVLEISPIFDALGGSGVPGGVDGGAMQISSFVRPRPQXXXXXXXXXXXXXXGEA-----GAGQATTDDVRKEKAQEQGHVSDVANQQRSVEDDGGLEGSRGRAEAKAPATGREMDDDGVTGTRRASGEEEKELEVRVPGRGGARTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXQGGEPEGEEAGGPAEGLDRNPHGHGGQHTGGGSGRQDRRVRRRPVQRRTFIVTKEGLSVYCLVSVVVNTDGNXXXXXXXXXXXXXXXXXDNSRHYSCSLSTFSAPGNGMAVIPPVWAPLVLVKPNDGVSRGISLGCHLDASVGADPAARGGAGTEPGVDDGAGAPPRSFRDRLRGWFQQHKGSAHSTLGSGWARTSSDSGGGSYSGTIMVVLRGECTFEHKARVAEAAGAVGLVVINNEPGGVTLAMPGASNAGINDDXXXXXXXGNGG--VQGSGVNIPVAMVGLEDGVEIMKMLSAAATAGVDEEAHMQGVLDARTMHDSVFSRLMEEQKQGLRDSRGSLLPAAA--GYSGSSGGDVSGSRDACSGSGSPTPPRESWRSAGGGDDASGGSGDGTAADYRFPSGDNGKGAGRIPAADTSLQDAGSSGVGXXXXXAVGGGPGDEARPIVDGPSAAAADAGTGAMPSKGWGREGRAPVEEVVEE----VEGETSSGSSXXXXXXXXXXXXXXXXXSGNNQFSFLSSGFDEATLGGMRLPPFSLPRAAVGDGYVQV 815
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 560.5 |
| Seed ortholog evalue | 1e-156 |
| Seed eggNOG ortholog | 2880.D7FWV0 |
| Model size | 1854 |
| KEGG ko | ko:K01191,ko:K01230,ko:K10084,ko:K10085 |
| KEGG Reaction | R05982,R06722 |
| KEGG Pathway | ko00510,ko00511,ko00513,ko01100,ko04141,map00510,map00511,map00513,map01100,map04141 |
| KEGG Module | M00073,M00074 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000139,GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0004571,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005794,GO:0006464,GO:0006491,GO:0006508,GO:0006511,GO:0006516,GO:0006517,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0015923,GO:0015924,GO:0016020,GO:0016787,GO:0016798,GO:0019538,GO:0019941,GO:0030163,GO:0030246,GO:0030433,GO:0031090,GO:0031974,GO:0031984,GO:0033554,GO:0034976,GO:0035977,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0070013,GO:0071704,GO:0097466,GO:0098588,GO:0098791,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901700,GO:1904380,GO:1904382,GO:1904587 |
| Exons | 5 |
| EggNOG free text desc. | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| EggNOG OGs | KOG2429@1,KOG2429@2759 |
| Ec32 ortholog description | Mannosyl-oligosaccharide 1,2-alpha-mannosidase, family GH47 |
| Ec32 ortholog | Ec-08_004510.1 |
| EC | 3.2.1.113,3.2.1.24 |
| Cds size | 1854 |
| COG Functional cat. | G |
| CAZy | GH38,GH47 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko04091,ko04131 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842515.2419813-CDS-E_fasciculatus_S2_contig8572:363..501 | 1696842515.2419813-CDS-E_fasciculatus_S2_contig8572:363..501 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8572 364..501 + |
| 1696842515.2631185-CDS-E_fasciculatus_S2_contig8572:1401..2160 | 1696842515.2631185-CDS-E_fasciculatus_S2_contig8572:1401..2160 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8572 1402..2160 + |
| 1696842515.2820237-CDS-E_fasciculatus_S2_contig8572:3228..3414 | 1696842515.2820237-CDS-E_fasciculatus_S2_contig8572:3228..3414 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8572 3229..3414 + |
| 1696842515.2935178-CDS-E_fasciculatus_S2_contig8572:4276..4360 | 1696842515.2935178-CDS-E_fasciculatus_S2_contig8572:4276..4360 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8572 4277..4360 + |
| 1696842515.3058136-CDS-E_fasciculatus_S2_contig8572:5886..6573 | 1696842515.3058136-CDS-E_fasciculatus_S2_contig8572:5886..6573 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8572 5887..6573 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8572.16698.1 >prot_E_fasciculatus_S2_contig8572.16698.1 ID=prot_E_fasciculatus_S2_contig8572.16698.1|Name=mRNA_E_fasciculatus_S2_contig8572.16698.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=618bp
VSCFLVGGRAAWVVIASGGGGEAQQSAQFGQSTAQTVFLEEVGLIEVIST GHNNFVLHHPDTGEVLEISPIFDALGGAGVPGGADAGAMQISSFVRSRPQ RRQQEPQQKQQQQRQQANAKEAGAGQATADDGRKEKAQKQGGVSAVANQQ RLLEDDDGLEGSRGRAETEAPVTVRGMDDDGVTGTRGASEEEEELEVRVP GSDGARTAGEAAAPTPAPVVSGTAIDDGEEYEKEEVERDEERGERGQDGE LEGEDGGAGEGLHRSRHGAGDQHTGGSGRQNRRVRRRPAQRRTFIVTKEA KIAEAAGAVGLVVINNEPGGVTLTMPGASNAGVYDDEEDEDEEEQGGSDV RGNGVSIPVAMVGLEDGVEIMKILSAAATAGVDEEVHMQGVLDARTLHDS VLSRLVEEQKEGLRDNRGSLLPAAAAAGCSGSSGGDDSGSRHACSGSGSP TPPRESWQGAGGDGGDGSGGGKVADDRFPSRDNGNGAGKIPAADTVLQDV GSSGGGIDVVGEGAGDEARSDVDGPFGAAADAGTGAMPNRGGQGEDRSPV EEAVEEAVEEVEGDDDSSTQKDSDGDRDSGNNPFPFLSSGFDEATLGGMR LPPFPLPRAVVGDGYVQV back to topmRNA from alignment at E_fasciculatus_S2_contig8572:364..6573+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8572.16698.1 ID=mRNA_E_fasciculatus_S2_contig8572.16698.1|Name=mRNA_E_fasciculatus_S2_contig8572.16698.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6210bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8572:364..6573+ (Ectocarpus fasciculatus EfasUO2) GTGTCGTGTTTTTTAGTCGGAGGACGAGCGGCGTGGGTGGTGATTGCTTC
TGGGGGAGGCGGCGAGGCGCAGCAGAGTGCGCAATTCGGCCAGTCGACGG
CGCAGACGGTCTTCTTGGAGGAGGTCGGCTTGATCGAGGTAGAGTGCACG
GGCCCTTCCGCGCGCACGCCATTGCCGTCGGTTGCGTAAGGTACCACACC
CCCTGGACTGATTTTCAAAGCTCTCAACGAGACGGTCCCAACGCCGCCAA
ATTTGGGACTGTCCCTGTTGCTGCTGCAGAGAATTGAGCCGCGAAAATCG
TACCAGAGGATGATATTTTTTGTTGATGTTGGCCGGACGGGCTGACGGCA
TGGGAGGCCACTCTTCGTTTTTTTCGAAATCGTCTTGTCATCCCTCCTCT
GGCTGCTTGCTCGTCGTGGACTGCTCCCCCCCGCCCCGCACCGCTGTCAC
ACACAGCTCACAAATTACGTGCAGGCGTACGAAAGTTCCACGGACACGTC
ACTCGTCCGGGCTTTGTGTTTTCGGCTGCACACACTCACTAGTCACTAAA
TACTGTGACTTCAGAGCCGTTCTCGCAGTCCTGGCAGGGGTGGGGGGGCG
GCTTGTGAAAGATCAAACTTAGTCTCTGCCTCTGCCGGGTGTTTTTGCAC
TTAGTACGCCGATTTCCTCGGATAGGCTGCCTGCCCCGAAAGAACCGAAG
TAGTGAAGATTTTCAGCAATATAGGAGTGACCTCCTTCCCCCTATAAGAA
ACACGGAACCCCCCAAAATTTGGAGGGCCCAACACCCAGCCTTTCGCCCG
ATAACCACCTCTGCATACACGGTTTTCTTTTTTCGGAAACCCACTGTTTT
CCCTGCGTTTCCCGGGTTTGTGAAGAGTGCGGGGTTATGTAAAAAGTCCG
CGTTTTGGCAAGAATTACCACTTCTTCATCGCACGTTTTCACGTTTGAGG
GACGAACTTCAAAAGCGCCGCTGCCCGAACCCTAACATGCTTGTGTTGAC
TCGTGTTTTTCCCCGTTGTCCTGCTATTCCGGCACCAGGTAATCTCGACC
GGCCACAACAACTTCGTTCTGCACCATCCCGACACTGGTGAGGTTCTCGA
AATTTCGCCCATTTTTGACGCGTTGGGTGGCGCGGGCGTGCCCGGCGGTG
CGGACGCCGGGGCGATGCAGATCTCCAGCTTCGTCCGATCCCGGCCGCAG
CGGCGGCAGCAAGAACCGCAACAAAAACAGCAGCAGCAGCGACAACAAGC
AAATGCAAAGGAAGCGGGCGCGGGGCAAGCCACGGCCGACGATGGGCGGA
AGGAGAAGGCGCAAAAGCAAGGGGGTGTGTCCGCCGTCGCGAACCAGCAA
CGCTTGCTGGAGGATGATGACGGGCTCGAAGGCTCGCGAGGGCGAGCTGA
GACCGAAGCTCCGGTGACGGTAAGAGGGATGGACGACGACGGCGTGACGG
GGACCAGGGGAGCGTCGGAGGAGGAGGAGGAGTTGGAAGTTCGCGTCCCT
GGAAGCGATGGGGCGAGGACTGCAGGAGAGGCGGCGGCGCCGACGCCGGC
GCCGGTCGTCTCGGGGACAGCGATCGACGACGGGGAGGAGTACGAGAAGG
AAGAGGTGGAGAGAGATGAAGAGCGGGGAGAGCGGGGGCAAGACGGGGAA
CTAGAGGGAGAAGACGGGGGGGCAGGCGAAGGGCTTCACCGCAGCCGACA
TGGAGCCGGTGACCAACACACCGGCGGCAGCGGTAGGCAAAATCGTCGGG
TGAGGCGAAGGCCGGCCCAGAGGAGAACTTTCATTGTCACGAAAGAGGTG
AGAACCGTGGTCCCGGCAGCGGCAGCGGCAGCAGGAACAGCAGCAGGAAC
AGCAGCAGCCATCGCGCAACAGGCGGCCGGTAGCAGTAGCAGGGGCGAGC
GCAGACAGCAGTGCGAAGGACCAAATGATGCAGTGTTGTTTGCCTCTACG
AAGTATTTGGTGCGCGTGCTTGGGTCTCACCTTGAACTCCCCTGATATGT
TTTTCGTTTTTCAGGGCCTGGCGGTGCATTGCTTGGTATCCGTGGTGGCC
AACACCGACGGCAGCAACAACAGCAGCAACGGCAGCAGCAGCAGCAGCAG
CAGCGACAACAGCAGGCACTACTCGTGCTCGCTGTCTACCTTCAGCGCCC
CCGGCAACGGCATGGCCATCATCCCGCCGGTGTCGGCCCCGCTTGTTGTC
GTTGAACCCAACGACGGAGTTTCCGGGGGCATCTCTCTCGGTTGCCACCT
CGACGCCTCTGTTGGAGCTGAACCTGCTGCTAGCGGTGGTGCTGGCACTG
AGCCGGGCGTTGATGATGGTGGTGGTGCCTCCCCACGTAACTTTCGGGAC
AGGTTTTGGGGCTGGTTGCAACGACCCAGGGGCTCAGCGCCCTCGACGCC
AGCATCGAATGGGGCGAAAGCATCCTCTGATAGCGGCGGCGGCAAATATT
CTGGGACCATCATGGTCGTGCTACGAGGGGAATGCACGTTCGAGCACAAG
GTGGGGGAAGAGGCAAGGCTGCAGGCGCCACTGCTGCTGTTTTGGCTTTG
GTCTTGCCGATGATGCGGGCCGTTGATGTCGTTCTTGCTGTTGACGACAT
ACGTGAGGACAGAGATGTACTTGCATACTTCGTATAAAGCAAAGCACCAA
CGGTATGTTGCAAACCCACCCGCGATCACGTCACAAGTTGGAAAGATGTT
TCATTCATCAAATTGCTAGATCAACTACGTCACAAGCTAGGAAAGACGTT
CGTTCTACTCATCAAATTGCTAGATCAATCACGTCACGAGTCACGAAGGA
TGTTCTATTCATCAAACTGCTGACGCCGAGTTAATTCCAGACGGCCCCCG
CACGCGCGCGAGCAGGCGAAGATTGCCGAGGCGGCAGGGGCAGTCGGTCT
TGTGGTGATCAACAACGAGCCCGGAGGTGTGACCCTAACCATGCCGGGGG
CCAGCAACGCCGGGGTTTACGACGACGAAGAAGACGAAGACGAAGAAGAA
CAGGGGGGAAGTGATGTCCGGGGCAACGGCGTGAGCATCCCGGTCGCGAT
GGTGAGAGGGGATAAAGAGGGGCCCGTTTCTTGAGGATGAGTGCGCCGCC
GCCAATTTCCATGTACTGCCCACGACAGGAGAACCTCGCATTATGGTCGG
ATGGGGGCTTGTCGGCGTTTTGCAGACCGGGCGCGTCTTGGGGCAGCGTT
TACTGAAATGAGACAACGGACACACACAGGAGTGTCCCACACAAAAGAGA
CGCGCAGAAAGACACACCAGGGAAACGACTATTTTGGAGAATCTAAGGAC
ATGTTAGGATGGCAAGGTAAACGTTATGAATGAGCGCCATTTCTTTTCCG
ATGCGCGCACACTCGTAGAAGCACGTGTGCCGGCTGGTTCCTGTGCGCGC
GCCGCCCCAGGGCGTTTGTTCCACGAGTGTACCAAGGACGCGTATGCCGG
CGTTATGCATGCCGCCGCCTACTTCCATTGCCACGTCTGTGTTGGCTGTA
CTGCTTTCACAAGAGAAGGCAGGCGTCGCAGAGAGGGCGGGGTTATGGAG
GGTCAAGGGGTGGAGAGAGGAACAAACCCCTGCTGCGTGACCCCGGATCA
GAGAGCCCCCCCGCAGCTTATATCATGAACGATGAACAAGGACGTGGGGA
TGCCGAAACAAATGTAACATGACAAACATGGTGTGAATGCAACCACCGGA
CAACAAGGGTTACATGCACACGCTATGTTATATTAGCATTCCCGTGGAGA
ATATGTTAATATGAAAATACCCGGCACCACTGATTGAGTTTCCCGCATGA
CCTGTGTCGCCACTGATTGGTGGAACTCCCGTATCCGAATATGTCGTGTT
CTTGTGGATCCGCGACGACACTAACAACAATATTATGGCATACAAAATAC
TCGGTCAACCCAGGTGGGACTGGAAGACGGCGTGGAGATCATGAAGATCC
TCTCCGCCGCGGCGACCGCGGGGGTCGACGAAGAGGTCCACATGCAGGTA
AGGTGGTAGGTAGAACACCCGTTCTTGAGAGCGCTGACCGATATTGTTGG
CTTTCCGGGGTGCTTTTGTGCCCACCCTCCCGAGGTGCTAGTGTCGAACA
TCTCCGGAGATTTGGCCGGAACAAAATACGTTCAGTCGAGACATCTCTTT
CAGCTCCGCGAAGGAGTGAATGAGACGTTGCGTTGCCTACGTAGGCGAGT
GAGAAGAAGACGGGTGGGGGTCGGTCTCAAATTGCGTTTTCGCGACACCT
AGTACACCTATGCATAGCTGGCTTTCTTTCAGCTATTGGACCAGCTGATT
GTCGGGGCCATGTGGTGGCCGACCTCTATGTAAATGGATGTCTTGTGCGG
GAGTGAACCCGCTATGAAACCCGTCAAGGCAACCCCTCCGGCTAAGCGGG
TTCTTTTTCGAGAGCATGGTTGGAGAACATGTGGTACGTGGTGCGGTAAG
ATCACGTAGCAATCGGTCGCTACCCGACCCTACGCGCCAGCAAAGCAGGT
TCAGCCGGTCATGGAAAAAAAAATGGCGACGTCTGGGCCATCGTAATTGG
CGCCCATATATAAGAAATATCCGAAGAAGCACGTGTTGTTGCTGTTGTTG
ACGGCAGTGCATCTCCTTACTGTCTACATACAGTGGGGGGGGGCTCAATA
GTGCCGATATGGACCAGACCAGTCTACCGGCACTATTCAAAGTATGAATG
ACTTGGTGATTCAGCCCGTGCCCGACCAAACCACCGGGCGTCGGCACTAT
TCAACCGGCACTACTGAGGGTCCTTTTCTGTATGTTCGCCGCCAGTATTT
TGTTTGGCGTATAAATATCCACAGCGCTGTATCTCCCTTTTGGCGGGGGG
TTTCAAACACGGCACGACAGACGGCGAAACGATCTTTCGGCCATTACTTT
CCGAGCAGTGGACGAAATGAACGCGCCTATGCACGTGCTGTCCAGGCTTC
CCCGAGTTCTCTCTCCGTATCTCACCCCGCCATCTCGCTCGCTTTGGTTG
CCTGTGCCTCGCAAGGGCGCAAAACGTCCGCCCTCCCCCCCTCGGCCGAT
AACCATTGTTTCTTGGTGCTGGTGCTGCTGTGCCCTGTTCACAGCATACT
TCTCAGCCGCATACCACCCAACTGTTTACCGTTCCGTGGCCATGCGTAAA
CACTCGGCGATTCACTTTTTTCGTCGCCTATGACACCCACACACGAGCAC
CCCCCCGCCTCTGGCGGGCGGGCCCACCCATCTGCTTTTCACTGGACCAG
ATACGCTTACGCACATATCTGATGCCTTGACACCTTGACCGTAACAAACA
TGCTGACGCCTTCTTGCACAGGTGCTTTCCGTTGGTATGTTGACACCTCT
CCGATTTTAAAAGCAACACGATTGCCCCAACGTTCCGGGGGGGAAAGACT
GGCAAATACTTGGTGACAAAGGAGAGCTAGCTGTTGGTTCCCTTTTAAGT
TGACGATAGTGATCTTTTCCGCCATCCCTCAAGGTCTTGTACAATGTATG
TTGCTTTGTTTTTCGATGTGCAGGGGGTTCTCGATGCGAGGACGCTTCAC
GACAGCGTGCTCTCCAGGTTAGTTGAAGAGCAGAAGGAGGGGCTGCGGGA
TAACCGGGGCTCTTTGCTACCCGCCGCCGCCGCCGCAGGTTGCAGCGGCA
GCAGCGGTGGCGACGATAGCGGCAGCCGGCATGCCTGTAGCGGCAGCGGC
AGCCCGACGCCTCCTCGGGAATCGTGGCAGGGCGCTGGTGGTGATGGTGG
TGACGGTAGCGGTGGTGGTAAAGTTGCTGATGATAGATTTCCCTCACGAG
ACAACGGCAACGGTGCGGGGAAAATTCCTGCTGCTGACACCGTGCTGCAA
GATGTTGGCAGCAGCGGTGGCGGCATTGATGTCGTTGGAGAAGGCGCTGG
AGATGAAGCCCGGTCCGACGTCGACGGGCCGTTCGGCGCTGCGGCGGACG
CGGGAACTGGTGCGATGCCGAACAGAGGGGGGCAGGGGGAGGACCGGTCT
CCCGTCGAGGAGGCAGTCGAGGAGGCAGTCGAAGAGGTGGAGGGTGATGA
CGACAGTAGTACTCAAAAAGACAGCGATGGCGACAGAGATAGCGGGAACA
ACCCGTTCCCCTTCCTCTCGTCGGGTTTCGACGAGGCCACCCTGGGAGGC
ATGCGACTTCCACCTTTCCCCCTGCCAAGAGCTGTCGTCGGCGACGGCTA
CGTGCAGGTA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8572:364..6573+ >mRNA_E_fasciculatus_S2_contig8572.16698.1 ID=mRNA_E_fasciculatus_S2_contig8572.16698.1|Name=mRNA_E_fasciculatus_S2_contig8572.16698.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1854bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8572:364..6573+ (Ectocarpus fasciculatus EfasUO2) GTGTCGTGTTTTTTAGTCGGAGGACGAGCGGCGTGGGTGGTGATTGCTTC TGGGGGAGGCGGCGAGGCGCAGCAGAGTGCGCAATTCGGCCAGTCGACGG CGCAGACGGTCTTCTTGGAGGAGGTCGGCTTGATCGAGGTAATCTCGACC GGCCACAACAACTTCGTTCTGCACCATCCCGACACTGGTGAGGTTCTCGA AATTTCGCCCATTTTTGACGCGTTGGGTGGCGCGGGCGTGCCCGGCGGTG CGGACGCCGGGGCGATGCAGATCTCCAGCTTCGTCCGATCCCGGCCGCAG CGGCGGCAGCAAGAACCGCAACAAAAACAGCAGCAGCAGCGACAACAAGC AAATGCAAAGGAAGCGGGCGCGGGGCAAGCCACGGCCGACGATGGGCGGA AGGAGAAGGCGCAAAAGCAAGGGGGTGTGTCCGCCGTCGCGAACCAGCAA CGCTTGCTGGAGGATGATGACGGGCTCGAAGGCTCGCGAGGGCGAGCTGA GACCGAAGCTCCGGTGACGGTAAGAGGGATGGACGACGACGGCGTGACGG GGACCAGGGGAGCGTCGGAGGAGGAGGAGGAGTTGGAAGTTCGCGTCCCT GGAAGCGATGGGGCGAGGACTGCAGGAGAGGCGGCGGCGCCGACGCCGGC GCCGGTCGTCTCGGGGACAGCGATCGACGACGGGGAGGAGTACGAGAAGG AAGAGGTGGAGAGAGATGAAGAGCGGGGAGAGCGGGGGCAAGACGGGGAA CTAGAGGGAGAAGACGGGGGGGCAGGCGAAGGGCTTCACCGCAGCCGACA TGGAGCCGGTGACCAACACACCGGCGGCAGCGGTAGGCAAAATCGTCGGG TGAGGCGAAGGCCGGCCCAGAGGAGAACTTTCATTGTCACGAAAGAGGCG AAGATTGCCGAGGCGGCAGGGGCAGTCGGTCTTGTGGTGATCAACAACGA GCCCGGAGGTGTGACCCTAACCATGCCGGGGGCCAGCAACGCCGGGGTTT ACGACGACGAAGAAGACGAAGACGAAGAAGAACAGGGGGGAAGTGATGTC CGGGGCAACGGCGTGAGCATCCCGGTCGCGATGGTGGGACTGGAAGACGG CGTGGAGATCATGAAGATCCTCTCCGCCGCGGCGACCGCGGGGGTCGACG AAGAGGTCCACATGCAGGGGGTTCTCGATGCGAGGACGCTTCACGACAGC GTGCTCTCCAGGTTAGTTGAAGAGCAGAAGGAGGGGCTGCGGGATAACCG GGGCTCTTTGCTACCCGCCGCCGCCGCCGCAGGTTGCAGCGGCAGCAGCG GTGGCGACGATAGCGGCAGCCGGCATGCCTGTAGCGGCAGCGGCAGCCCG ACGCCTCCTCGGGAATCGTGGCAGGGCGCTGGTGGTGATGGTGGTGACGG TAGCGGTGGTGGTAAAGTTGCTGATGATAGATTTCCCTCACGAGACAACG GCAACGGTGCGGGGAAAATTCCTGCTGCTGACACCGTGCTGCAAGATGTT GGCAGCAGCGGTGGCGGCATTGATGTCGTTGGAGAAGGCGCTGGAGATGA AGCCCGGTCCGACGTCGACGGGCCGTTCGGCGCTGCGGCGGACGCGGGAA CTGGTGCGATGCCGAACAGAGGGGGGCAGGGGGAGGACCGGTCTCCCGTC GAGGAGGCAGTCGAGGAGGCAGTCGAAGAGGTGGAGGGTGATGACGACAG TAGTACTCAAAAAGACAGCGATGGCGACAGAGATAGCGGGAACAACCCGT TCCCCTTCCTCTCGTCGGGTTTCGACGAGGCCACCCTGGGAGGCATGCGA CTTCCACCTTTCCCCCTGCCAAGAGCTGTCGTCGGCGACGGCTACGTGCA GGTA back to top
|