prot_E_fasciculatus_S2_contig8565.16694.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8565.16694.1
Unique Nameprot_E_fasciculatus_S2_contig8565.16694.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length60
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8565.16694.1 vs. uniprot
Match: D8LP57_ECTSI (SNase-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP57_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.340e-17
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:    7 LVLGKIVALRLGEFDKFGRLLGAIHTPEGVNVASDLVSKGMAVEYHGGKRPEW 59
            LVLGKIVAL+LG+FDKFGRLLG+I T +GVNV  DL+S+G+AV+Y GGKR  W
Sbjct:   74 LVLGKIVALKLGKFDKFGRLLGSIETSDGVNVGDDLISRGLAVKY-GGKRHAW 125
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8565.16694.1 vs. uniprot
Match: A0A8F8X6J7_9VIRU (Putative endonuclease n=1 Tax=Pacmanvirus S19 TaxID=2862371 RepID=A0A8F8X6J7_9VIRU)

HSP 1 Score: 53.5 bits (127), Expect = 2.180e-7
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:    7 LVLGKIVALRLGEFDKFGRLLGAIHTPEGVNVASDLVSKGMAVEYHGGKRPEW 59
            L+L KI++L +GEFDK+GRLLG + T +G+NV   +V+ G    Y+G     W
Sbjct:   90 LILNKIISLEIGEFDKYGRLLGVV-TIDGINVNEHMVAGGYGCSYNGSGEKLW 141
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8565.16694.1 vs. uniprot
Match: A0A1X6WF84_9VIRU (SNase-like n=1 Tax=Pacmanvirus A23 TaxID=1932881 RepID=A0A1X6WF84_9VIRU)

HSP 1 Score: 48.5 bits (114), Expect = 1.880e-5
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0 
Query:    7 LVLGKIVALRLGEFDKFGRLLGAIHTPEGVNVASDLVSKGMAVEYHGGKRPEW 59
            L+L KIV L +G+FDK+GRLLG +   +G+NV + +V+ G    Y G     W
Sbjct:   90 LILNKIVNLEIGDFDKYGRLLGTVIV-DGINVNAYMVAGGYGCNYDGSGEKLW 141
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8565.16694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LP57_ECTSI1.340e-1771.70SNase-like n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A8F8X6J7_9VIRU2.180e-745.28Putative endonuclease n=1 Tax=Pacmanvirus S19 TaxI... [more]
A0A1X6WF84_9VIRU1.880e-543.40SNase-like n=1 Tax=Pacmanvirus A23 TaxID=1932881 R... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035437SNase-like, OB-fold superfamilyGENE3D2.40.50.90coord: 3..58
e-value: 6.6E-6
score: 27.5
NoneNo IPR availableSUPERFAMILY50199Staphylococcal nucleasecoord: 7..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8565contigE_fasciculatus_S2_contig8565:111..290 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8565.16694.1mRNA_E_fasciculatus_S2_contig8565.16694.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8565 111..290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8565.16694.1 ID=prot_E_fasciculatus_S2_contig8565.16694.1|Name=mRNA_E_fasciculatus_S2_contig8565.16694.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=60bp
DHAESPLVLGKIVALRLGEFDKFGRLLGAIHTPEGVNVASDLVSKGMAVE
YHGGKRPEW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035437SNase_OB-fold_sf