mRNA_E_fasciculatus_S2_contig8542.16671.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE) HSP 1 Score: 550 bits (1418), Expect = 1.020e-176 Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 1
Query: 1 EASARCLFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAARELRRSIVAGAAPPQSLVDGARRRYSKWRRGRFSAFPSRAGVSCEVDVTHAALQLAAGGVADDFGGIRVGQRVET 828
EASARCLFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAARELRRSIVAGA PPQSLVDGARRRYSKWRRGRFSAFPSRAGVSCEVDVTHAALQLAAGGVADDFGGIRVGQRVET
Sbjct: 7498 EASARCLFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAARELRRSIVAGAPPPQSLVDGARRRYSKWRRGRFSAFPSRAGVSCEVDVTHAALQLAAGGVADDFGGIRVGQRVET 7773
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 6.520e-176 Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 1
Query: 4 ASARCLFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAARELRRSIVAGAAPPQSLVDGARRRYSKWRRGRFSAFPSRAGVSCEVDVTHAALQLAAGGVADDFGGIRVGQRVET 828
ASARCLFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAARELRRSIVAGA PPQSLVDGARRRYSKWRRGRFSAFPSRAGVSCEVDVTHAALQLAAGGVADDFGGIRVGQRVET
Sbjct: 6897 ASARCLFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAARELRRSIVAGAPPPQSLVDGARRRYSKWRRGRFSAFPSRAGVSCEVDVTHAALQLAAGGVADDFGGIRVGQRVET 7171
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW96_HETAK) HSP 1 Score: 244 bits (624), Expect = 2.680e-75 Identity = 132/287 (45.99%), Postives = 178/287 (62.02%), Query Frame = 1
Query: 1 EASARCLFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHG-------LAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAA----RELRRSIVAGAAPPQSLVDGARRRYSKWRRGRFSAFPSRAGVSCEVDVTHAALQLAAGGVADDFGGIRVGQRVET 828
AS + FL R + +S+D TA + RG+VLG++GF G+HYWEV++D +NWGS F+GVAP A W+G+GFL+YRA Q +GSE +YG YY GD++GVLLDMDRGT+SFVKDG+DFN+GRPVV MGIAY LR + G LA+YPCFG+KS GD M++ Q W+S++G A R+ QAVDA+VA R RR ++ G P ++ + KW+ + + + SRAGV E+ HA L AG A + G+ VG+R T
Sbjct: 25 RASTQTFFLLSRKNRHDAIKVSADCLTAQASRESGRGVVLGTKGFCGGVHYWEVRIDGANWGSTFIGVAPADARGWDGFGFLSYRAVQRFGSETLYGNYYGQGDKIGVLLDMDRGTLSFVKDGEDFNVGRPVVAQMGIAYKRLRELYARHRGGXXXXXXXXSQLALYPCFGMKSPGDIMSLENQNWWSQKGYDGAERLSQAVDALVAVQLFRRARRRGLLTGL--PDWILRATHELFRKWKAQKETVYMSRAGVDVEIQTDHALLMECAG-EAGETAGLAVGRRFTT 308
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5W7_9STRA) HSP 1 Score: 233 bits (593), Expect = 4.560e-72 Identity = 122/277 (44.04%), Postives = 174/277 (62.82%), Query Frame = 1
Query: 1 EASARCLFLFDRARMTGGVSLSSDLGTAACTVSGN-RGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAARELRRSIVAGAAPPQSLVDGARRRYSKWRRGRFSAFPSRAGVSCEVDVTHAALQLAAGGVADDFGGIRVGQRVET 828
+ S FL R R G +SSD T C SG+ R MVLG+RGF G+HYWEV+V+ +NWGSVF+G AP +++WNGYG LNYRA Q++GSE +YG+Y++ GD+VGVLLDMD GT+SF KDG+DFN+G+ VVNMG+AYH+LRR+G ++ +YPCFGVKS GDQ++I W S RGL + +++ + A + S ++V + Y W SR G++ + + A++ AAG +AD+F ++ G+ V+T
Sbjct: 3 DVSQETFFLLKRRRSGDGPQVSSDFTTVTCDNSGSGRSMVLGTRGFSRGVHYWEVQVNAANWGSVFIGAAPHESNSWNGYGLLNYRATQSFGSETLYGSYFSVGDKVGVLLDMDHGTISFFKDGEDFNVGKVTVVNMGVAYHNLRRIGNRSSSSS---MLYPCFGVKSSGDQLSIRKHHWASSRGLAPSSLLQRILHAKSIMHDWNLSYNPTVRLNTTMVSETFKGYHAWSNRDSIVIMSRPGIAVNISSSDNAIRAAAGALADEFA-LKAGKIVKT 275
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUW3_9ARCH) HSP 1 Score: 193 bits (490), Expect = 3.450e-52 Identity = 93/184 (50.54%), Postives = 130/184 (70.65%), Query Frame = 1
Query: 7 SARCLFLFDRARMTGGVSLSSDLGTAACT-VSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGL 555
S+ FL+ R+ + GV++S+D TA C+ SG+R ++LGSRGF G+HYWEV V ++WGSVF+GVAP AS W+G GF+NYRA QA+GSE +YG+YY D++GVLL+M+ GT++F KDGDDFN+G VVNMG+AYH++RR + +YPC G+K+ D++TI W +GL
Sbjct: 522 SSETFFLWKRSNVNEGVTISNDHMTATCSRQSGSRYLILGSRGFTQGIHYWEVAVKSASWGSVFIGVAPEEASGWHGLGFINYRATQAFGSETLYGSYYGVNDKIGVLLNMENGTLTFFKDGDDFNVGAVRVVNMGVAYHNVRRHTSRYSTSP---VLYPCIGMKAQNDELTIKDGHWHCTKGL 702
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Hypothetical (protein n=5 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBF6_9STRA) HSP 1 Score: 169 bits (429), Expect = 5.550e-44 Identity = 115/276 (41.67%), Postives = 147/276 (53.26%), Query Frame = 1
Query: 25 LFDRARMTGGVSLSSDLGTAACTVSGN-RGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVA--------------PRHASTWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHL-RRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQK-WFSRRG----LGHARRVRQAVDAIVAARELRRSIVAGAAPPQSLVDGARRRYSKWR------RGRFSAFPSRAGVSCEVDVTHAALQLA 771
L DR G+ +S DL TA CT RG+ L S R G HYWEV V+R+ WGSVF+GVA P A+ W G GF+NYRA QA+G+E +YG+YY GD VGVLLD DRGT+SFVKDGDDFN GR VV ++G AY + RR GR+ GL Y C G+K GD++++ G K W L +R ++A+ A E RR A P + A +KWR +G+ SRA V +D + A A
Sbjct: 3659 LLDRRECGAGLKVSEDLLTATCTAPRRGRGLALASTRMRTGRHYWEVAVERATWGSVFVGVAAVGAGRGPAAPLKAPGAAAGWAGVGFVNYRATQAFGAEALYGSYYGPGDVVGVLLDCDRGTLSFVKDGDDFNAGRAVVAHLGTAYSDVWRRFGRSCPGARAGL--YACLGLKGDGDRLSLRGSKAWTDGMDVPPRLDAFQRAAGGIEALRAFAEARRF---STALPDAFRAAAAAATAKWRETFDGVQGKRVLARSRARVDVALDASEEAFAKA 3929
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0J5_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.530e-37 Identity = 116/377 (30.77%), Postives = 160/377 (42.44%), Query Frame = 1
Query: 1 EASARCLFLFDRARMTGGVSLSSDLGTAACTVS-GNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPR---------------------------------------------------------------------------------------------------HAST----WNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHL-RRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQK-WFSRRGL------GHARRVR-----QAVDAIVAARELRRSIVAGAAPPQSLVDGARRRYSKWRRGRFSA--FPSRAGVSCEVDVTHAALQLAA 774
+ S + FL DR + +S+D TA CT NRG+VLG++ R GLHYWEV+V+++ WGS+F+GVA + H ST W G+GF+NYRA QA+G+E +YG+Y+ GD +GVL D D G V FVKDG+DFN GRPVV+N+G A+ + RR ++ G YPCFGVK GD+++I K W+ R L G R R QA A+ A R L I + L RR + +W+ + P+RA V E+D + A+ AA
Sbjct: 3018 QLSRQSAFLLDRRHCASSIEISNDCLTATCTAPRANRGLVLGTKCMRHGLHYWEVRVEQATWGSIFIGVAAKGDVVGLDANLSTNNSSSKKHVGSGDAKSTQRWHQHTHSPSSLSHQTTVSSPVLSSSQQRSPTVSRLLSTASAIMNSGASGPVSLSTSYRPHYHPSLSTNHRSTPSSGWGGFGFVNYRATQAFGAEALYGSYFGPGDVIGVLFDADAGKVCFVKDGEDFNQGRPVVMNLGTAFSSVWRRAASRSSSSRAGF--YPCFGVKCEGDRLSICECKSWYDDRELSSPLTEGPPRIKRLDSIIQAAIALDAWRSLTNGISTSSCDTDELYATTRRAHDQWKSRNLTKVRIPNRALVQVELDTSICAITKAA 3392
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRA2_9STRA) HSP 1 Score: 143 bits (361), Expect = 6.450e-35 Identity = 85/253 (33.60%), Postives = 135/253 (53.36%), Query Frame = 1
Query: 19 LFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHA--------STWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVDAIVAARELRRSIVAGAAPPQSLVDGARRRYSKWRRGRFSAFPSRA-GVSCEVDVT 750
LF+ D+ + +S DL T CT R + LG+ GF +G+HYWE++VD++ +GSVFLGV +H+ + W G+GF+N+RA +E IYG ++ AGD +G+ L+M+ G +SF DG F G +V ++G+A+ L+ H +YPC G++ GD++T+ G KW S+ GL + V+ + RS P + Y +WR R+ P+R+ GV +VD +
Sbjct: 2885 LFVMDKQAAFSTLKISDDLLTVQCTSGEARNLALGNVGFSSGIHYWEIRVDQAEFGSVFLGVCEKHSKGQSSLNLNRWQGWGFVNFRATYHNSTERIYGDHFNAGDTIGICLNMEAGKLSFFMDGIKF--GEHIVTDLGVAFDGLKN-------DRHIKTLYPCIGLRKSGDKVTLNG-KWISQPGLPPSLLCHDNVEL----HSICRSWSLDQPLPSQFLQSCYTHYCRWRSNRYLRVPTRSKGVIIDVDTS 3123
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCW2_9STRA) HSP 1 Score: 137 bits (345), Expect = 8.800e-33 Identity = 78/194 (40.21%), Postives = 113/194 (58.25%), Query Frame = 1
Query: 55 VSLSSDLGTAAC---TVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHAST---WNGYGFLNYRA--CQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFS-RRGLGHARRVRQAVDAIVAARE 609
+SLS+DL +A +GN ++ G+ G+HYWEV + + GS+F+G+A ++ W +GF++YR CQA G ++ YG Y++AGD +GV DM+ GT+SF+KDGDDF GRP V+NMG+A+ HLR H L P G GD + GQKW S R R++QA++A V +E
Sbjct: 3999 LSLSNDLSSATLEPHASAGNHVLIRGNMSMSCGVHYWEVGIQSCSHGSLFIGIASSMITSSEGWGDFGFVSYRVRWCQAEGEQL-YGRYFSAGDTIGVRFDMEEGTLSFIKDGDDFTRGRPAVINMGVAFRHLRTQNSC-----HRLTFVPVIGCSHPGDSFFVKGQKWTSYNRYQWPMERLQQALEASVVIQE 4186
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY61_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.610e-32 Identity = 87/262 (33.21%), Postives = 140/262 (53.44%), Query Frame = 1
Query: 1 EASARCLFLFDR-ARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHYWEVKVDRSNWGSVFLGVAPRHAS--------TWNGYGFLNYRACQAYGSEIIYGAYYAAGDRVGVLLDMDRGTVSFVKDGDDFNMGRPVVVNMGIAYHHLRRVGRTDAAGHHGLAMYPCFGVKSLGDQMTIGGQKWFSRRGLGHARRVRQAVD--AIVAARELRRSIVAGAAPPQSLVDGARRRYSKWRRGRFSAFPSRA-GVSCEVDVT 750
+A ++ LF D+ A +S+S D CT R + LG+ GF +G+HYWEV+VD + +GSVFLGV +H W G+GF+N+RA +E IYG ++ AGD +GV L+M+ G +SF DG + G +V ++G+A+ L+ + H +YPC G++ GDQ+T+ G KW S GL + V+ +++ A R ++ P + + + Y +WR R+ RA G++ +VD +
Sbjct: 3110 QAQSQHLFALDKQATFAASLSVSDDGLAVTCTSGEARNLSLGTVGFSSGIHYWEVRVDHAEFGSVFLGVCEKHVKGQPSLNLGRWQGWGFVNFRATYHNSTERIYGDHFNAGDTIGVCLNMESGKLSFFMDGIKY--GEHIVTDLGVAFDGLK-------SDRHIKTLYPCIGLRKAGDQVTLNG-KWVSHPGLSSTLLYQDHVELQSVLHAWAGRDDVL-----PLAFMQASYAFYCRWRTNRYRRVSIRAKGMTIDVDTS 3356 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8542.16671.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8542.16671.1 >prot_E_fasciculatus_S2_contig8542.16671.1 ID=prot_E_fasciculatus_S2_contig8542.16671.1|Name=mRNA_E_fasciculatus_S2_contig8542.16671.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=276bp EASARCLFLFDRARMTGGVSLSSDLGTAACTVSGNRGMVLGSRGFRAGLHback to top mRNA from alignment at E_fasciculatus_S2_contig8542:4388..6079- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8542.16671.1 ID=mRNA_E_fasciculatus_S2_contig8542.16671.1|Name=mRNA_E_fasciculatus_S2_contig8542.16671.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1692bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8542:4388..6079- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8542:4388..6079- >mRNA_E_fasciculatus_S2_contig8542.16671.1 ID=mRNA_E_fasciculatus_S2_contig8542.16671.1|Name=mRNA_E_fasciculatus_S2_contig8542.16671.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=828bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8542:4388..6079- (Ectocarpus fasciculatus EfasUO2)back to top |