prot_E_fasciculatus_S2_contig8528.16660.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8528.16660.1
Unique Nameprot_E_fasciculatus_S2_contig8528.16660.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length95
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8528.16660.1 vs. uniprot
Match: A0A6H5KW60_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW60_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 8.750e-52
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 ESATGAPGASDTTSRIYEEAASLLAHNRAVLGQALARSGNTERGIQELELACPEILEYQQNAQGRRDSKSWLHCYANLAEMYKTQKRFEEASSLL 95
            ESATGAPGASDTTSRIYEEAASLLAHNRAVLGQALARSGNT+RGIQELELACPEILEYQQNAQGRRDSKSWLHCYANLAEMYKTQKRFEEASSLL
Sbjct:  226 ESATGAPGASDTTSRIYEEAASLLAHNRAVLGQALARSGNTDRGIQELELACPEILEYQQNAQGRRDSKSWLHCYANLAEMYKTQKRFEEASSLL 320
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BLAST of mRNA_E_fasciculatus_S2_contig8528.16660.1 vs. uniprot
Match: D7FJX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX8_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 1.210e-31
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0 
Query:   34 ALARSGNTERGIQELELACPEILEYQQNAQGRRDSKSWLHCYANLAEMYKTQKRFEEASSLL 95
            ALARSGNT+RGIQELELACPEILEYQQNAQGRRDSKSWLHCYANLAEMYKTQKRFEEASSLL
Sbjct:  133 ALARSGNTDRGIQELELACPEILEYQQNAQGRRDSKSWLHCYANLAEMYKTQKRFEEASSLL 194
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8528.16660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW60_9PHAE8.750e-5298.95HTH La-type RNA-binding domain-containing protein ... [more]
D7FJX8_ECTSI1.210e-3198.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..95
e-value: 3.1E-5
score: 25.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8528contigE_fasciculatus_S2_contig8528:3688..5390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8528.16660.1mRNA_E_fasciculatus_S2_contig8528.16660.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8528 3688..5392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8528.16660.1 ID=prot_E_fasciculatus_S2_contig8528.16660.1|Name=mRNA_E_fasciculatus_S2_contig8528.16660.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=95bp
ESATGAPGASDTTSRIYEEAASLLAHNRAVLGQALARSGNTERGIQELEL
ACPEILEYQQNAQGRRDSKSWLHCYANLAEMYKTQKRFEEASSLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf