mRNA_E_fasciculatus_S2_contig8508.16642.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G770_ECTSI) HSP 1 Score: 382 bits (980), Expect = 1.980e-133 Identity = 200/209 (95.69%), Postives = 202/209 (96.65%), Query Frame = 1
Query: 4 LLSLHRRALRASVAAAAKPRACPAPCAAAAPLSSMSDPKPRNYGEVATTVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFFEHT 630
L S RRALRASVAAA KPR CPAPCAAAAPLSSMSDPKPRNYGEVATTVENRSSAKDALQKSCYFKIDFGI+EEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKST VKEIATMG NLV+ASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFFEHT
Sbjct: 2 LASTGRRALRASVAAAVKPRTCPAPCAAAAPLSSMSDPKPRNYGEVATTVENRSSAKDALQKSCYFKIDFGISEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTPVKEIATMGANLVIASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFFEHT 210
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGF7_9STRA) HSP 1 Score: 255 bits (651), Expect = 2.460e-83 Identity = 123/177 (69.49%), Postives = 150/177 (84.75%), Query Frame = 1
Query: 100 SSMSDPKPRNYGEVATTVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFFEHT 630
SS+S+P +YGE +TV SSA+ AL+KSCYFKIDF I+E+ATVYEAVQRFAAYNIGALAVT+ KV+GI+SERDYV K+ALLG+ S++T VKE+ATMG N++VA KSD++ DCM KM+ARDIRHLPV+DEE G VVGMLS+KDL+KEV EKE ++ K+ DFKLGRGGFFEHT
Sbjct: 34 SSLSEPGSHSYGETPSTVNELSSARSALEKSCYFKIDFKIDEDATVYEAVQRFAAYNIGALAVTDKGGKVVGIISERDYVCKIALLGRQSQTTKVKEVATMGANIIVAKKSDSLHDCMRKMLARDIRHLPVLDEESGTVVGMLSIKDLIKEVAHEKEALIAKLKDFKLGRGGFFEHT 210
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U998_9STRA) HSP 1 Score: 223 bits (569), Expect = 7.130e-70 Identity = 120/201 (59.70%), Postives = 151/201 (75.12%), Query Frame = 1
Query: 31 RASVAAAAKPRACPAPCAAAAPLSSMSDPK--PRNYGEVATTVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFFEH 627
RA + A A P PA A A SSMSDP R YG+ + + S+A A +KSCYFKIDF I+++A+VYEAVQ+FAAYNIG L V D+ V GI+SERDYV+K+ALLG+ S T V E+ T G N+VVA +D++Q+CM KM+ARDIRHLPVV+EE GQVVGMLSVKDL+KE+ +EK+EI+TK+TDF +GRG FFEH
Sbjct: 84 RAMMTARALPTLRPAAPAVRA-WSSMSDPTYMQRRYGDAPEDIGHSSTASTAWEKSCYFKIDFKISQDASVYEAVQKFAAYNIGCLVVMKGDE-VAGIISERDYVTKIALLGRKSVDTKVSEVCTSGANMVVARTTDSVQECMGKMLARDIRHLPVVEEETGQVVGMLSVKDLIKELVKEKDEIITKLTDFTMGRGAFFEH 282
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTH5_9STRA) HSP 1 Score: 218 bits (554), Expect = 6.280e-69 Identity = 105/168 (62.50%), Postives = 135/168 (80.36%), Query Frame = 1
Query: 124 RNYGEVATTVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFFEH 627
R YG+ + + S+A A +KSCYFKIDF I+++A+VYEAVQ+FAAYNIG L V D+ V GI+SERDYV+K+ALLG+ S T V E+ T G N+VVA +D++Q+CM KM+ARDIRHLPVV+EE GQVVGMLSVKDL+KE+ +EK+EI+TK+TDF +GRG FFEH
Sbjct: 20 RRYGDAPEDIGHSSTASTAWEKSCYFKIDFKISQDASVYEAVQKFAAYNIGCLVVMKGDE-VAGIISERDYVTKIALLGRKSVDTKVSEVCTSGANMVVARTTDSVQECMGKMLARDIRHLPVVEEETGQVVGMLSVKDLIKELVKEKDEIITKLTDFTMGRGAFFEH 186
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAT3_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.750e-62 Identity = 100/155 (64.52%), Postives = 127/155 (81.94%), Query Frame = 1
Query: 163 SSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFFEH 627
S+A +A +KSCYFKIDF I+E+A+VYEAVQRFAAYNIG L V + + KV GI+SERDYV+KVALLG+ S V EI T N+VVA+ SD++QDCM M+ARDIRHLPVV E+ G VVGMLSVKDL+KE+ +EK+E+++K+TDF +GRG +FEH
Sbjct: 71 STASNAWEKSCYFKIDFKIDEDASVYEAVQRFAAYNIGCLVVVSKEGKVAGIISERDYVTKVALLGRKSVDVKVSEICTSEANMVVANTSDSVQDCMGMMLARDIRHLPVVGED-GDVVGMLSVKDLIKELVKEKDEMISKLTDFTMGRGAYFEH 224
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: CBS (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D580_9STRA) HSP 1 Score: 201 bits (511), Expect = 4.400e-62 Identity = 101/179 (56.42%), Postives = 135/179 (75.42%), Query Frame = 1
Query: 97 LSSMSDPK--PRNYGEVATTVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFFEH 627
SS+S+P R Y ++ ++ + +A+ A +KSCYFKIDF I EEA +YEAVQRFAAYNIGALAVT+ + KVIG++SERDYV K ST V E+ T G N+VVA +D++ CM KM+A+DIRHLPVVD+EK +VVGMLS+KDL+KE+ +EK++I+ K+TDF LG+G FF+H
Sbjct: 40 FSSLSEPSYLSRPYKDIPASIGEKGTAQTAWEKSCYFKIDFKIPEEAMMYEAVQRFAAYNIGALAVTDQEGKVIGVISERDYVCK---------STTVGEVCTRGSNIVVAKTTDSIATCMKKMLAKDIRHLPVVDDEKKEVVGMLSIKDLIKELQKEKDDIIEKLTDFNLGKGAFFQH 209
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS19_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.280e-57 Identity = 98/184 (53.26%), Postives = 133/184 (72.28%), Query Frame = 1
Query: 88 AAPLSSMSDPKPRNYGE------VATTVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFF 621
AA SS+S PR + ++TTVE A DA +KSCY IDF I E+ATVY+AVQRF+AY+IGAL T+ D + G+VSERDYV+K+ALLGK SK T + EI+T NL+ AS D+++ CM KM++RDIRHLP++D++ G+VVGMLS+KDL+K + EKE+ + ++DF LG+GG F
Sbjct: 49 AAVRSSISRASPRVFANASAIRSMSTTVEEEVLASDAFKKSCYVAIDFTIAEDATVYDAVQRFSAYDIGALVTTDTDGSIAGVVSERDYVTKIALLGKTSKDTKISEISTKSANLITASPKDSIEICMGKMLSRDIRHLPLLDDD-GKVVGMLSIKDLVKALVAEKEKTIQVLSDFALGKGGHF 231
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PA47_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.240e-55 Identity = 89/160 (55.62%), Postives = 120/160 (75.00%), Query Frame = 1
Query: 142 ATTVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFF 621
A TV+ +A DA KSCY +D+ INE VYEAVQ+FAAYN+G L TND+ + G+VSERDYV K+ALL K SK T +KEI+T NL+VAS S+T+ DCMAKM+ +DIRHLP++DE+ G VVG++S+KDL+K +EK++ + ++DF LG+GG F
Sbjct: 30 AQTVKEGLTATDAWSKSCYSDMDYTINENLPVYEAVQKFAAYNVGCLVTTNDEGNISGVVSERDYVCKIALLSKTSKDTPIKEISTKSANLIVASPSETVSDCMAKMLLKDIRHLPLLDEDGG-VVGIVSIKDLVKAELKEKQDAIKTLSDFALGKGGHF 188
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6B7_9STRA) HSP 1 Score: 183 bits (464), Expect = 8.060e-55 Identity = 87/158 (55.06%), Postives = 125/158 (79.11%), Query Frame = 1
Query: 148 TVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFF 621
T+E SAK A +KSCYF++DF I EE+ V+EA+Q+FAAY+IG L T++D K+ G++SERDY+SK+ALLG+ SK T+VKEI+T NL+ A+ D++ DCM KM+++DIRHLP++D++ G VVGMLSVKDL+K + +EK+E + ++DF G+GG F
Sbjct: 62 TLEEIPSAKTAWEKSCYFEMDFTIPEESHVFEAIQKFAAYDIGCLVTTDEDGKISGVISERDYISKMALLGRKSKETLVKEISTKSSNLMTATPHDSVDDCMEKMLSKDIRHLPLLDDD-GHVVGMLSVKDLVKTMLQEKDETIKILSDFATGKGGHF 218
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Match: Uncharacterized (protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0H1P6_9ZZZZ) HSP 1 Score: 180 bits (457), Expect = 1.940e-54 Identity = 83/160 (51.88%), Postives = 120/160 (75.00%), Query Frame = 1
Query: 142 ATTVENRSSAKDALQKSCYFKIDFGINEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTMVKEIATMGVNLVVASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGFF 621
A +N SA + SCY KIDF I+EE TV A+QRF A+NIG LAVT+ KV+G++SERDYV+KVA LGK +KEI T G ++++A K D+++ CM KM+ +DIRHL V+D++ + VGM+S+KDL+KE+ ++K++++T++TDFKLG+GGFF
Sbjct: 9 AVIPKNPVSALSVFKNSCYHKIDFKISEENTVNSAIQRFTAFNIGCLAVTDSANKVVGVLSERDYVNKVAALGKNGDVVKIKEICTYGPHIIIAKKDDSLEQCMNKMLFKDIRHLLVIDDKNEEFVGMISIKDLIKEIMKDKDDMITRLTDFKLGKGGFF 168 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8508.16642.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8508.16642.1 >prot_E_fasciculatus_S2_contig8508.16642.1 ID=prot_E_fasciculatus_S2_contig8508.16642.1|Name=mRNA_E_fasciculatus_S2_contig8508.16642.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=211bp FLLSLHRRALRASVAAAAKPRACPAPCAAAAPLSSMSDPKPRNYGEVATTback to top mRNA from alignment at E_fasciculatus_S2_contig8508:2745..6383+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8508.16642.1 ID=mRNA_E_fasciculatus_S2_contig8508.16642.1|Name=mRNA_E_fasciculatus_S2_contig8508.16642.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3639bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8508:2745..6383+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8508:2745..6383+ >mRNA_E_fasciculatus_S2_contig8508.16642.1 ID=mRNA_E_fasciculatus_S2_contig8508.16642.1|Name=mRNA_E_fasciculatus_S2_contig8508.16642.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=633bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8508:2745..6383+ (Ectocarpus fasciculatus EfasUO2)back to top |