prot_E_fasciculatus_S2_contig8501.16637.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8501.16637.1
Unique Name	prot_E_fasciculatus_S2_contig8501.16637.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	192

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8501.16637.1 vs. uniprot
Match: A0A6H5KG81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG81_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 9.570e-131
Identity = 181/191 (94.76%), Postives = 185/191 (96.86%), Query Frame = 0

Query:    1 NLCRDKAVKLLKEGKAELSVEWFSKAIRLRPGDASLYWGRSQSWERAGNPRKAVVDAGIGVCLRPRVAAGFARLSASFEAKGRHADVVRACFLGMRCGDSSKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAGIAGRLRLGGTALVLEACAGGQGLSSPPWPRGAMPPVLLEAP 191
            NLCRDKAVKLLKEGKAELSVEWFSKAIRLRP DASLYWGRSQSWERAGNPRKAVVDAG+GVCLRPRVAAGFARLSA+FEA+GRHADVVRACFLGMRCGDSSKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAGIAGRLR+GG  L L AC GGQGLSSPPWPRGAMPPVLLEAP
Sbjct:   18 NLCRDKAVKLLKEGKAELSVEWFSKAIRLRPADASLYWGRSQSWERAGNPRKAVVDAGVGVCLRPRVAAGFARLSATFEAQGRHADVVRACFLGMRCGDSSKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAGIAGRLRVGGAGLALGACEGGQGLSSPPWPRGAMPPVLLEAP 208

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BLAST of mRNA_E_fasciculatus_S2_contig8501.16637.1 vs. uniprot
Match: D7G7K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K5_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 3.600e-96
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0

Query:   47 AGNPRKAVVDAGIGVCLRPRVAAGFARLSASFEAKGRHADVVRACFLGMRCGDSSKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAGIAGRLRLGGTALVLEACAGGQGLSSPPWPRGAMPPVLLEAP 191
            AGNPRKAVVDAG+GVCLRPRVAAGFARLSASFEA+GRHADVVRACFLGMRCGDSSKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAGIAGRLR+GG  L L ACAGGQG SSPPWPRGAMPPVLLEAP
Sbjct:    2 AGNPRKAVVDAGVGVCLRPRVAAGFARLSASFEAQGRHADVVRACFLGMRCGDSSKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAGIAGRLRVGGAGLALAACAGGQGFSSPPWPRGAMPPVLLEAP 146

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8501.16637.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8501.16637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KG81_9PHAE	9.570e-131	94.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7K5_ECTSI	3.600e-96	94.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 2..105 e-value: 5.3E-10 score: 41.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 5..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8501	contig	E_fasciculatus_S2_contig8501:1962..4741 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8501.16637.1	mRNA_E_fasciculatus_S2_contig8501.16637.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8501 1962..4741 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8501.16637.1 ID=prot_E_fasciculatus_S2_contig8501.16637.1|Name=mRNA_E_fasciculatus_S2_contig8501.16637.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=192bp
NLCRDKAVKLLKEGKAELSVEWFSKAIRLRPGDASLYWGRSQSWERAGNP
RKAVVDAGIGVCLRPRVAAGFARLSASFEAKGRHADVVRACFLGMRCGDS
SKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAG
IAGRLRLGGTALVLEACAGGQGLSSPPWPRGAMPPVLLEAP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf