mRNA_E_fasciculatus_S2_contig85.16627.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: CBFD_NFYB_HMF (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB4_ECTSI) HSP 1 Score: 374 bits (960), Expect = 3.890e-129 Identity = 225/249 (90.36%), Postives = 229/249 (91.97%), Query Frame = 1
Query: 1 MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPSAAKKGEAGGDMMEEPDADDGETDGAGAGAGDDAQGGKERVVNAAGGADAQRQQQSGAVPGGGETGAIATPTGMNVERQEPPSGLQXXXXXXXXXXXXXAVSTGLVPMDEDGGSHAAPAPAPAVPAAAGLGEGGVVG 747
MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGP+AAKKGEAGGDMMEEP+ADDGETDGAGAGAGDDAQGG++RVVNAAG ADA RQQQSGAVPGGGE GAIATPTGMNVERQEPPSGLQXXXXXXXXXXXX S GL PMDEDGGSHAAPA EGGVVG
Sbjct: 1 MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPAAAKKGEAGGDMMEEPEADDGETDGAGAGAGDDAQGGRDRVVNAAGSADAHRQQQSGAVPGGGEAGAIATPTGMNVERQEPPSGLQXXXXXXXXXXXX--ASAGLAPMDEDGGSHAAPAXXXXXXXXXXXXEGGVVG 247
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RK43_HETAK) HSP 1 Score: 147 bits (372), Expect = 5.190e-41 Identity = 69/89 (77.53%), Postives = 82/89 (92.13%), Query Frame = 1
Query: 7 ENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLD 273
ENK PEFEPPQAC+QR++K+VLPDN+QIGKDAKAAF+R+AGIFIMYLTACANDFCRE+KRQTI+ DVM AI ELEF +L EPLK++L+
Sbjct: 30 ENKPPEFEPPQACIQRIVKAVLPDNIQIGKDAKAAFARAAGIFIMYLTACANDFCRESKRQTITGPDVMMAISELEFHDLVEPLKDFLE 118
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN07_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.250e-37 Identity = 80/132 (60.61%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 13 KTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPSAAKKGEAGGDMMEEPDADDGETD 408
K PEFEPPQACVQR+IKS LPDN QI K++KAAFS++AGIFI+YLT CANDFC+E KR TIS+ DVM A++ELEF +L PL+E+L YR++AS KK AA A AA E G ++ ADDGE D
Sbjct: 67 KLPEFEPPQACVQRIIKSALPDNCQITKESKAAFSKAAGIFIIYLTTCANDFCKENKRSTISSADVMSAMRELEFHDLMGPLEEFLTNYRKDASTKKDGVAAATVASAPAAD-AELPGKKSDKAAADDGEDD 197
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWQ9_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.450e-34 Identity = 63/100 (63.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query: 7 ENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQ 306
ENK P+FEPP ACVQR+IK VLPD+ QI K++K AFS++AGIFI+YLT CANDFC+E KR TIS+ DV+ A++ELEF +L PL+E+L YR++ +AKK+
Sbjct: 18 ENKMPDFEPPMACVQRIIKGVLPDSCQITKESKTAFSKAAGIFIIYLTTCANDFCKEGKRSTISSADVLAALRELEFHDLIGPLEEFLAHYRQDTNAKKE 117
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH50_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.120e-31 Identity = 56/101 (55.45%), Postives = 81/101 (80.20%), Query Frame = 1
Query: 1 MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKK 303
MA+++ +FEPP ACV RV+K+ LP+N+ + KDA+AAF R+AGIFI YLT C+NDFCRE+KR TI QDVM A++EL F + E+PL+E+L+ Y++++ +K
Sbjct: 8 MADSRPQDFEPPMACVSRVMKAALPENILLTKDARAAFVRAAGIFIFYLTHCSNDFCRESKRATIFPQDVMAALRELGFEDFEKPLEEFLEAYKKDSEQRK 108
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSI8_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.790e-28 Identity = 64/125 (51.20%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 22 EFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPSAAKKGEAGGDMMEEPDADD 396
EFEPP ACV+R++KS LP + +GKDA +AF+R+ GIF++YLTACANDF RE KRQTI+A D+M +IKEL+F E L +L+Q+R+E K++ K A G +GEA G+ + D DD
Sbjct: 32 EFEPPLACVRRLLKSSLPTSTNVGKDASSAFARACGIFVIYLTACANDFARENKRQTITANDIMASIKELDFDEFTPQLTGFLEQHRKEEKEKRERKKASGLR----KSEGEAAGNHSDGDDLDD 152
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNS2_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.850e-27 Identity = 53/99 (53.54%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 22 EFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 318
EFEPP AC++R++K LP + +GKDA AAF+R+ GIF++Y+TACANDF E +RQTI+A DV+ A+KEL+F E LK +L+ YR +K+++KAA
Sbjct: 19 EFEPPLACIRRILKHALPSSTNVGKDASAAFARACGIFVIYITACANDFAHENRRQTITANDVLAALKELDFDEFTPQLKTFLENYRAAEKSKREAKAA 117
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D791_CYCTE) HSP 1 Score: 113 bits (283), Expect = 2.340e-27 Identity = 52/98 (53.06%), Postives = 77/98 (78.57%), Query Frame = 1
Query: 22 EFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKA 315
EFEPP ACV+R++K+ LP + +GKDA AAF+R+ GIF++Y+TACANDF RE++RQTI+A DV+ ++KEL+F E L+ +LD++R +K+ +KA
Sbjct: 31 EFEPPLACVRRILKNALPSSTNVGKDASAAFARACGIFVIYITACANDFARESRRQTITANDVLASVKELDFDEFSPHLEAFLDRHRAAEKSKRDAKA 128
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZNZ1_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.500e-27 Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 22 EFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 318
EFEPP ACV+R++K LP + +GKDA AAF+R++GIFI+YLTACANDF RE +RQTI+A DV+ AIKELEF E L +L++YR KK +KAA
Sbjct: 44 EFEPPVACVRRILKQTLPSSSNVGKDAVAAFARASGIFIIYLTACANDFARENRRQTITANDVLAAIKELEFDEFAPELSTFLERYRELEKNKKDAKAA 142
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Match: Dna (polymerase epsilon subunit 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTI8_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.760e-27 Identity = 53/87 (60.92%), Postives = 72/87 (82.76%), Query Frame = 1
Query: 10 NKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYL 270
+K+PEFEPP + V ++I+ + D+VQ+GK+AKA F+R AGIFI+Y+TACANDF RE KR TI+A DV QA+KELEF ++ EPL+E+L
Sbjct: 79 SKSPEFEPPLSSVTKIIRRAVGDSVQVGKEAKATFTRVAGIFILYITACANDFSREGKRATITANDVYQALKELEFEDMVEPLQEFL 165 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig85.16627.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig85.16627.1 >prot_E_fasciculatus_S2_contig85.16627.1 ID=prot_E_fasciculatus_S2_contig85.16627.1|Name=mRNA_E_fasciculatus_S2_contig85.16627.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=250bp MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTback to top mRNA from alignment at E_fasciculatus_S2_contig85:698..3255+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig85.16627.1 ID=mRNA_E_fasciculatus_S2_contig85.16627.1|Name=mRNA_E_fasciculatus_S2_contig85.16627.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2558bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig85:698..3255+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig85:698..3255+ >mRNA_E_fasciculatus_S2_contig85.16627.1 ID=mRNA_E_fasciculatus_S2_contig85.16627.1|Name=mRNA_E_fasciculatus_S2_contig85.16627.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=750bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig85:698..3255+ (Ectocarpus fasciculatus EfasUO2)back to top |