mRNA_E_fasciculatus_S2_contig8498.16626.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8498.16626.1
Unique NamemRNA_E_fasciculatus_S2_contig8498.16626.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ06_ECTSI)

HSP 1 Score: 514 bits (1325), Expect = 1.340e-179
Identity = 274/303 (90.43%), Postives = 282/303 (93.07%), Query Frame = 1 
Query:    1 QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            +AVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKV         +    QDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLA SAEDNGKDDAKFR+DLY+IAK TLSSKLLTHEKDRFA+LAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFIL+KKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV      AEIEEAEKDKMRKKCKKIVDHG+NVFVNRQLIYNFPEQ+
Sbjct:    4 EAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKV-------LVNIAKTQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLADSAEDNGKDDAKFRDDLYHIAKTTLSSKLLTHEKDRFAELAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILNKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRKKCKKIVDHGVNVFVNRQLIYNFPEQI 299
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BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN2_9STRA)

HSP 1 Score: 465 bits (1196), Expect = 5.030e-160
Identity = 245/303 (80.86%), Postives = 265/303 (87.46%), Query Frame = 1 
Query:    1 QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            +AVLN+ AQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDG +SVTNDGATILRAIHVDNAAAKV              QDDEVGDGTTSVTVLCGELLREAE+LVN RLHPQTIIQGWRLATA AR+VL  +AEDN  D A FR DL NIA+ TLSSKL+THEK  FA+LAV+AVLRLKGSGNLDYIQIIK PGGSL+ESYLEEGFILDKKIGVGQP+ +ENAKIL+ANT+MDTDKIKIYGSRVRV      AEIEEAE++KMRKKCK I+DHG+NVFVNRQLIYNFPEQ+
Sbjct:    4 EAVLNEQAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGSVSVTNDGATILRAIHVDNAAAKV-------LVDIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNARLHPQTIIQGWRLATAIARKVLVEAAEDNAADAAAFRADLMNIARTTLSSKLVTHEKHHFAELAVDAVLRLKGSGNLDYIQIIKKPGGSLRESYLEEGFILDKKIGVGQPRRIENAKILVANTSMDTDKIKIYGSRVRVDSMAKVAEIEEAEREKMRKKCKNIIDHGVNVFVNRQLIYNFPEQI 299
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BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4B7_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 5.130e-141
Identity = 216/303 (71.29%), Postives = 252/303 (83.17%), Query Frame = 1 
Query:    1 QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            +AVLN  AQVDKG+NAR+SSFVGAIA+ADLVK+TLGPKGMDKIL S+ S DGGI++TNDGATIL++I+VDNAAAKV             +QDDEVGDGTTSVTVLCGELLREAEKL+NQR+HPQT+I+GWR A   AR+ L   A DN  D+A FR+DL NIAK TLSSKL+ HEKD FA LAV+AV+RL+GSGNLD+IQIIK PGGSL++SYL +GFILDKKIG GQPK +ENA+IL+ANTAMDTDKIKIYGSRVRV      A+IEEAE+DKMR K  KI+ HGIN F+NRQLIYNF E++
Sbjct:   19 EAVLNAEAQVDKGENARMSSFVGAIAVADLVKSTLGPKGMDKILSSVSSPDGGITITNDGATILKSIYVDNAAAKV-------LVDIAKVQDDEVGDGTTSVTVLCGELLREAEKLINQRIHPQTVIEGWRKAANIARKTLEGMAVDNSSDEAAFRQDLMNIAKTTLSSKLVHHEKDHFATLAVDAVMRLRGSGNLDHIQIIKKPGGSLRDSYLADGFILDKKIGTGQPKRIENARILLANTAMDTDKIKIYGSRVRVDSMAKVADIEEAERDKMRTKVNKIISHGINCFINRQLIYNFSEEI 314
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BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SR55_HETAK)

HSP 1 Score: 412 bits (1059), Expect = 2.770e-139
Identity = 212/303 (69.97%), Postives = 247/303 (81.52%), Query Frame = 1 
Query:    1 QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            +AVLND A V+KGDNAR+ SFVGAIAI D+VKTTLGPKGMDKIL S+ + D  ISVTNDGATIL+++HVDNAAAKV              QDDEVGDGTTSV VLCGELLREAE L+N R+HPQT+I GWR A   AR VL + A DN  D  +FR DL  IAK TLSSK+LTH+KD FA+LAV+AVLRLKGSG L+YIQ+IK PGGSL++SYLE GF+LDK+IGVGQPK VENA++L+ANT+MD DKIKIYGSRVRV      A IEEAE+DKMR+KC+KI+DHG+NVF+NRQLIYNFPEQ+
Sbjct:    4 EAVLNDQASVEKGDNARMMSFVGAIAICDMVKTTLGPKGMDKILVSVSAHDKSISVTNDGATILKSVHVDNAAAKV-------LIDIAKTQDDEVGDGTTSVAVLCGELLREAEALINARIHPQTVIHGWRKAAQIARGVLESLAWDNAGDPERFRADLLAIAKTTLSSKILTHDKDHFAELAVDAVLRLKGSGQLEYIQVIKKPGGSLRDSYLENGFVLDKRIGVGQPKRVENARVLVANTSMDADKIKIYGSRVRVDSIQKVAAIEEAERDKMRRKCQKIIDHGVNVFINRQLIYNFPEQI 299
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BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLH1_9STRA)

HSP 1 Score: 412 bits (1058), Expect = 4.060e-139
Identity = 215/303 (70.96%), Postives = 249/303 (82.18%), Query Frame = 1 
Query:    1 QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            +AVLN  AQVDKG+NAR+SSF+GAIA+ADLVK+TLGPKGMDKIL S+GS  G I++TNDGATILR+IHVDNAAAKV             +QDDEVGDGTTSV VLCGELLREAE L+ QR+HPQTII+GWR+AT  AR  L + A DN  D+  FR+DL NIAK TLSSKL+ HEK  FA+LAV  VLRLKGSGNLD+IQI+K PGGSLK+SYL +GFILDKKIGVG PK +E+AKIL+ANTAMDTDKIKIYGSRVRV      AEIEEAE+DKMR K +KI+DHG+N F+NRQLIYNF E++
Sbjct:    4 EAVLNAEAQVDKGENARMSSFIGAIAVADLVKSTLGPKGMDKILTSVGSEGGNITITNDGATILRSIHVDNAAAKV-------LVDIAKVQDDEVGDGTTSVAVLCGELLREAESLIQQRIHPQTIIEGWRMATNIARAELESMAVDNSADEEAFRQDLVNIAKTTLSSKLVYHEKSHFAELAVTCVLRLKGSGNLDHIQILKKPGGSLKDSYLADGFILDKKIGVGCPKRLEDAKILLANTAMDTDKIKIYGSRVRVDSMAKVAEIEEAERDKMRSKVQKIIDHGVNCFINRQLIYNFSEEI 299
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BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WY33_GLOUD)

HSP 1 Score: 409 bits (1052), Expect = 3.280e-138
Identity = 216/303 (71.29%), Postives = 249/303 (82.18%), Query Frame = 1 
Query:    1 QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            QAVL+  +QV+KG+NAR+SSFVGAIAIAD+VKTTLGPKGMDKILQSMG  D  ISVTNDGATILR+++VDNAAAKV              QD+EVGDGTTSV VLCGELLREAEKL++QR+HPQTII GWR+A + A   L  SA+D+  D  KFREDL NIA+ TLSSKLLTHEKD FA+LAVNAVLRLKGS NLD+IQIIK  GGSLK+SYL+EGF+LDKKIGVGQPK +ENAKILIANT MDTDKIKIYG++V+V      + IE+AEK KM+ KC+KI   GIN FVNRQLIYN+PEQ+
Sbjct:    3 QAVLDPESQVEKGENARMSSFVGAIAIADMVKTTLGPKGMDKILQSMGGPDKSISVTNDGATILRSVYVDNAAAKV-------LVDIAKTQDEEVGDGTTSVAVLCGELLREAEKLIDQRIHPQTIIDGWRIALSTAHEALVKSAKDHSADSDKFREDLLNIARTTLSSKLLTHEKDYFAELAVNAVLRLKGSNNLDHIQIIKKAGGSLKDSYLDEGFLLDKKIGVGQPKRIENAKILIANTGMDTDKIKIYGAKVKVDSMEKVSAIEDAEKAKMKAKCEKIAAFGINCFVNRQLIYNYPEQI 298
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BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9V5_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 6.380e-138
Identity = 216/303 (71.29%), Postives = 252/303 (83.17%), Query Frame = 1 
Query:    1 QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            +AVLN+ AQVDKG+NAR++SFVGAIA+ADLVK+TLGPKGMDKIL S+ S +G I++TNDGATILR+I VDNAAAKV    +R       +QD+EVGDGTTSV VLCGELLREAE L+ QR+HPQTII+GWR +   AR  L   + DN  DDAKFREDL NIAK TLSSKL+ HEK  FA+LAVNAVLRL+GSGNLD+IQI+K PGGSLK+SYL +GFILDKKIGVGQPK VENA+IL+ANTAMDTDKIKIYGSRVRV      AEIEEAE+DKMR K +KI+DH +N F+NRQLIYNF E++
Sbjct:    4 EAVLNEQAQVDKGENARMASFVGAIAVADLVKSTLGPKGMDKILSSVQSENGQITITNDGATILRSISVDNAAAKVLVDIAR-------VQDEEVGDGTTSVAVLCGELLREAEDLIGQRIHPQTIIEGWRKSAQIAREKLEEMSVDNSADDAKFREDLINIAKTTLSSKLVYHEKQYFAELAVNAVLRLQGSGNLDHIQILKKPGGSLKDSYLADGFILDKKIGVGQPKRVENARILLANTAMDTDKIKIYGSRVRVDSMAKVAEIEEAERDKMRTKVEKIIDHKVNCFINRQLIYNFSEEI 299
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RXR6_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 1.070e-136
Identity = 210/303 (69.31%), Postives = 248/303 (81.85%), Query Frame = 1 
Query:    1 QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            QA L+    VDKG+NARLSSFVGAIAIAD+VKTTLGPKGMDKILQ +   D GISVTNDGATILR++ +DNAAAKV    +R       +QDDEVGDGTTSV VLCGELLREAE+LVNQR+HPQTI+ GWR+A   AR+ L  +A DN  ++ KFR+DL+ IA+ TLSSKLLTHEKD FA LAV+AV+RLKGS NLD+IQI+K  GG L++SYLEEGF+LDK +GVGQP+ +ENAKIL+ANT+MDTDK+KIYGSRV+V      AEIEEAEKDKMR KC+KI+ HG NVF+NRQLIYN PE +
Sbjct:    3 QAFLDQGTSVDKGENARLSSFVGAIAIADMVKTTLGPKGMDKILQKISEHDQGISVTNDGATILRSVMLDNAAAKVLVDIAR-------VQDDEVGDGTTSVAVLCGELLREAEQLVNQRIHPQTIVAGWRIARGVARKALEEAAIDNSDNEEKFRDDLFRIARTTLSSKLLTHEKDYFAKLAVDAVMRLKGSNNLDHIQILKKAGGQLRDSYLEEGFLLDKTVGVGQPRRIENAKILLANTSMDTDKVKIYGSRVKVDSMNKVAEIEEAEKDKMRNKCEKIIAHGCNVFINRQLIYNLPESI 298
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP43_NANGC)

HSP 1 Score: 405 bits (1040), Expect = 2.080e-136
Identity = 216/302 (71.52%), Postives = 246/302 (81.46%), Query Frame = 1 
Query:    7 VLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLV-NQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            VLN  A+VDKG+NAR+SSF+GAIAIADLVKTTLGPKGMDKILQS+GS +G I+VTNDGATIL+++H+DN AAKV              QDDEVGDGTTSV VLCGELLREAE L+ NQRLHPQT+ QGWR AT  AR+ L   AED+  D   FR+DL NIA  TLSSKLL+ EK  FA LAV+AVLRLKGS NLD+IQIIK PGG+LK+S+L EGF+LDKKIGVGQPK +E AKILIANT+MDTDKIKI+GSRVRV      AEIEEAEK+KMR KCKKI+DHGIN  +NRQLIYNFPEQ+
Sbjct:    6 VLNAGAEVDKGENARMSSFIGAIAIADLVKTTLGPKGMDKILQSVGSSEGAITVTNDGATILKSVHIDNPAAKV-------LVDIAKTQDDEVGDGTTSVAVLCGELLREAESLLSNQRLHPQTVAQGWREATILARKALEGLAEDHADDPVAFRQDLINIATTTLSSKLLSQEKAHFAKLAVDAVLRLKGSANLDHIQIIKKPGGALKDSFLAEGFLLDKKIGVGQPKRMEKAKILIANTSMDTDKIKIFGSRVRVDSLQKVAEIEEAEKEKMRVKCKKILDHGINCLINRQLIYNFPEQI 300
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Match: CCT-beta (n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8E3_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 6.100e-136
Identity = 212/302 (70.20%), Postives = 247/302 (81.79%), Query Frame = 1 
Query:    4 AVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGKDDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRV------AEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV 891
            A +N    VDKG+NARLSSF+GAIAIAD+VKTTLGPKGMDKILQ +   D GISVTNDGATILR+I++DNAAAKV    +R       +QDDEVGDGTTSV VLCGELLREAE LV QR+HPQ I QGWRLA A AR+ L  +A DN  D+ KFR DL++IA+ TLSSKL+THEKD FA+LAV+AV+RLKGS NL++IQI+K  GGSL++SYLEEGF+LDK +GVGQP+ +ENAKILIANT+MDTDKIKIYGSRVRV      AEIEEAEK KMR+KC KI+ HG NVF+NRQLIYN PE +
Sbjct:    4 AYMNQGTSVDKGENARLSSFIGAIAIADMVKTTLGPKGMDKILQKVSEHDQGISVTNDGATILRSINLDNAAAKVLVDIAR-------VQDDEVGDGTTSVAVLCGELLREAELLVAQRIHPQVIAQGWRLARAEARKALEGAAVDNSSDEEKFRNDLFHIARTTLSSKLVTHEKDYFANLAVDAVMRLKGSNNLEHIQILKKAGGSLRDSYLEEGFLLDKSMGVGQPRRIENAKILIANTSMDTDKIKIYGSRVRVDSMNKVAEIEEAEKGKMRQKCDKIIAHGCNVFINRQLIYNLPESI 298
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8498.16626.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
CCT-beta1.340e-17990.43n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
CCT-beta5.030e-16080.86n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C... [more]
CCT-beta5.130e-14171.29n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID... [more]
CCT-beta2.770e-13969.97n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6... [more]
CCT-beta4.060e-13970.96n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S... [more]
CCT-beta3.280e-13871.29n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WY33_GLOUD[more]
CCT-beta6.380e-13871.29n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0... [more]
CCT-beta1.070e-13669.31n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7... [more]
CCT-beta2.080e-13671.52n=1 Tax=Nannochloropsis gaditana (strain CCMP526) ... [more]
CCT-beta6.100e-13670.20n=1 Tax=Attheya septentrionalis TaxID=420275 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8498contigE_fasciculatus_S2_contig8498:2283..6485 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score519.6
Seed ortholog evalue9.5e-145
Seed eggNOG ortholog2880.D8LJ06
Preferred nameCCT2
Model size891
KEGG koko:K09494
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000323,GO:0001775,GO:0002199,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0006403,GO:0006457,GO:0006458,GO:0006810,GO:0006887,GO:0006955,GO:0007338,GO:0007339,GO:0008037,GO:0008144,GO:0008150,GO:0009566,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0017076,GO:0019219,GO:0019222,GO:0019899,GO:0019953,GO:0022414,GO:0022607,GO:0030141,GO:0030312,GO:0030554,GO:0031224,GO:0031225,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031410,GO:0031625,GO:0031647,GO:0031974,GO:0031982,GO:0031983,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0034622,GO:0034774,GO:0035036,GO:0035578,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042582,GO:0043085,GO:0043167,GO:0043168,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044093,GO:0044183,GO:0044297,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045055,GO:0045321,GO:0045935,GO:0046658,GO:0046903,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051084,GO:0051086,GO:0051128,GO:0051130,GO:0051131,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051338,GO:0051347,GO:0051704,GO:0051972,GO:0051973,GO:0060205,GO:0060255,GO:0060341,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070202,GO:0070203,GO:0071840,GO:0071944,GO:0080090,GO:0090666,GO:0090670,GO:0090685,GO:0097159,GO:0097367,GO:0097708,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101031,GO:1901265,GO:1901363,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904872,GO:1904874,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
Exons7
EggNOG free text desc.chaperone mediated protein folding independent of cofactor
EggNOG OGsCOG0459@1,KOG0363@2759
Ec32 ortholog descriptionTCP-1-like chaperonin intermediate domain
Ec32 orthologEc-20_002230.1
Cds size891
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8498.16626.1prot_E_fasciculatus_S2_contig8498.16626.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8498 2283..6485 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842508.459059-CDS-E_fasciculatus_S2_contig8498:2282..23971696842508.459059-CDS-E_fasciculatus_S2_contig8498:2282..2397Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8498 2283..2397 +
1696842508.4742613-CDS-E_fasciculatus_S2_contig8498:2898..30101696842508.4742613-CDS-E_fasciculatus_S2_contig8498:2898..3010Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8498 2899..3010 +
1696842508.489583-CDS-E_fasciculatus_S2_contig8498:3287..34321696842508.489583-CDS-E_fasciculatus_S2_contig8498:3287..3432Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8498 3288..3432 +
1696842508.509957-CDS-E_fasciculatus_S2_contig8498:4308..44271696842508.509957-CDS-E_fasciculatus_S2_contig8498:4308..4427Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8498 4309..4427 +
1696842508.5220582-CDS-E_fasciculatus_S2_contig8498:4733..48921696842508.5220582-CDS-E_fasciculatus_S2_contig8498:4733..4892Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8498 4734..4892 +
1696842508.5331666-CDS-E_fasciculatus_S2_contig8498:5278..53991696842508.5331666-CDS-E_fasciculatus_S2_contig8498:5278..5399Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8498 5279..5399 +
1696842508.5510936-CDS-E_fasciculatus_S2_contig8498:6365..64851696842508.5510936-CDS-E_fasciculatus_S2_contig8498:6365..6485Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8498 6366..6485 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8498.16626.1

>prot_E_fasciculatus_S2_contig8498.16626.1 ID=prot_E_fasciculatus_S2_contig8498.16626.1|Name=mRNA_E_fasciculatus_S2_contig8498.16626.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=297bp
QAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSR
DGGISVTNDGATILRAIHVDNAAAKVDNKCSRFFFSFVCLQDDEVGDGTT
SVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLAASAEDNGK
DDAKFREDLYNIAKPTLSSKLLTHEKDRFADLAVNAVLRLKGSGNLDYIQ
IIKMPGGSLKESYLEEGFILDKKIGVGQPKVVENAKILIANTAMDTDKIK
IYGSRVRVAEIEEAEKDKMRKKCKKIVDHGINVFVNRQLIYNFPEQV
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mRNA from alignment at E_fasciculatus_S2_contig8498:2283..6485+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8498.16626.1 ID=mRNA_E_fasciculatus_S2_contig8498.16626.1|Name=mRNA_E_fasciculatus_S2_contig8498.16626.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4203bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8498:2283..6485+ (Ectocarpus fasciculatus EfasUO2)
CAGGCAGTGCTCAACGATAACGCCCAGGTGGACAAGGGCGACAACGCTCG
CCTGAGCTCCTTCGTGGGCGCCATCGCCATTGCAGACCTTGTCAAGACCA
CCCTTGGGCCCAAAGGTGATACACAGCAGATACGTAGCACCAGTCGGGGA
AGCGCATGGAGGGCCGTCGCGCGCAGCGTCACCGGTGACACCACCTACCC
TACGGTCCTTTGCCGTGTTTGTAAAATAACTTGGATCCGGGGTCATGGCC
TACTCCGTGGTTGAACATGGTTTGCAACAACTCTACCAATACGAATTGAC
TTGTGCACCGTCATCCTTGCTACACTTTCAAGAATTTGGCGTACTTCCGT
CTATGCTACCTACTACCTACACGAGAGTTTCAGTGCTCCTTTTCGTGAAG
AGTCGGTCTGCAACCGCGTCATGGGCAACCAACCACCACGCTGCCGCTGG
TACGGCAATCCACGACTCATGCCTGCCTCTCTCTCCCCCCTCCCTCTCTC
TCTCATTCCCCATCTCTCTCTCCCTGCCTCTCCTCTGCTCTCTCTCTCTC
TCTCTCTCTCGTCTTTCCTCTCTTTGTCTCTCTCGCTCTCCTTCTTTCCC
TCTCCCCATCTCTCAGGTATGGATAAGATTTTGCAGTCTATGGGCAGCCG
GGACGGGGGCATCAGCGTGACCAACGACGGTGCAACAATCCTCCGAGCGA
TCCACGTCGACAACGCCGCGGCGAAGGTGTTGGTGAACATCGCAAAAACG
CAGGCGAGCACGCAACAACAAAGACACGCAGACCCGAAGCCCCCTGATTT
TTCCTTTTCTGGCAGTACCATCAAACCCGGAAGAAAATTAAACATCGAAG
TGATGCATGGTACTTGTAAATGTTTTTTTTTTTTTATTTGTTGGAGTTCG
CAGGACAAGTAAGTAAACAACATGTTTTTTTTTCCTATTTTTTTTCTGTT
GCTCCCCCTCCTCGCGTTCTCTCGTCGTTGTGGTGTGTGGGAGCTTATAC
GTCAGCGACAACAAATGTTCACGTTTTTTTTTTTCGTTCGTTTGTTTGCA
GGACGACGAGGTCGGCGATGGCACGACGAGCGTCACCGTCCTTTGTGGGG
AGCTGCTCAGGGAGGCTGAGAAGCTCGTCAACCAACGCCTGCACCCACAG
GTACGTCTCTCCATCCGTCTGGTCTGGTTTGGTGGGATCTAGGATTTTCT
TTCAAGAAAATGTACGTCATATCAAGAAACACTAGTATACCCGTTTGAGA
TAATACCCCAGTCGAAGGGGATGAAAGGTGTTGATATATGTGTAACCATT
TTGATGCGGTGAGCGCTGAACAAAAAAAAAGTCGAGTGCACACTTGAATC
CGCCTGTCTGCGTCGCCTCTCTCTATTTTCCTCTCCGCGGGAGGATTTGT
TGATACGTTCTACAATAGGATGGTGCTTGCGCGAGGGTACGCTGAATCCT
CGAAGAGGGGGTGATGCGCGTTGTTGCTGCTGCTGCTGTCGCTGCCTGTC
TGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTCTTGTTGACT
GGTGGTGATGGCAGAGTATGGGTGCGGTTGTCGTGGTGGTGGCGGCAGTG
ACAATCCGTGTTACACTACATTTCACGATTTTCTTGAAATCTGTGTTGAA
AGAAAGATGGGAGAGCTAGTCTTGGAAGATAGTAAATAAACTCAAGATGA
AGGTTGGCTCTGGAAAGTCGGCCCGGCTTCGTGTGTCCGTCCATACCCTC
ATTTCGCTCTCAAAACGAAGGTGCTCCACCACGCCTTTCTGTCCGGTGTT
TTTGATTTTGTTTAGGCGTGCGAAACCTTGCCGATCAAGTCGTTTAGGAC
TCCATGCGTTGGTCCATATTTCCTCAAGCACTGGCCAAAGACAAGACAAG
ACTCCAGTCTCTCAAAGCTTGTGTGTTTTGCTGTTTTTGTGGCCGGCCGG
TGTTTTTTTTTCCTCGTGTGTTAACGTTGTTTCGTGGCTGCGTTTTTGTT
GTTGTTGTTGTTTTCCCCGTGTGCAGACGATCATCCAGGGGTGGCGATTG
GCGACGGCGGCGGCCCGGAGAGTGCTCGCCGCCAGCGCGGAGGACAACGG
GAAGGATGACGCAAAGTTCCGAGAGGACCTCTACAACATCGCAAAGTGCG
TACTGTAGGCATGTATCATAGGTAACTTTTTGTTCGCTTATGCCCTCGGC
AGACTTGTTCGCTGCGTTTTCTTAAGTGTTGGGGCGGTTTTTTCCACAAT
GATTTGGTTTTCTTCATTCCCATGTGGGGGTTGTAGCGTGAAATTCGCAA
GTACTTGCTGTATACATGCCCATGTCATCTCTACCCCAGTCTGATCGTTG
TTCCAACGCTCATTTTTTTTTTCTTCAACATATTTCTGTCGTGTTTCTCT
TTTCTCTCCCGCTCGACGTTCTTGGTCTTAACTCTCCCTCCCCACCCCCA
GGCCGACGTTGAGCTCTAAGCTGCTCACGCACGAGAAGGACCGCTTCGCG
GACCTTGCCGTGAACGCCGTGCTCAGGCTCAAGGGGTCGGGTAACCTGGA
CTACATCCAGATCATCAAGATGCCGGGGGGTTCGCTGAAGGAGTCTTACC
TCGAGGAGGGGTGAGTTTCGTTGAAACGGCGGGGAAAATGTGTAGTGCTG
TGGTGGTGGTGGTGGTGGGGTGGGGGTTTGTTACGATGATGATATCGGAT
GCCTTTGCTGCTGCTCTGCCTCTGTTGGCGCTATTGTTGTTGCCCGTTTG
ATGTCATTTTTTTGTTGTTGTCGGATTGCTGTTGTCAGCGAAGTGTGGGG
GTCGACATGCTTCGCACTCGTCTATCGTGTACTTTGTTCGTACATTCGGT
TCTCTTTGTCGATCCCTCGGGGGCCATGTGACCAACGGGCCACAGGCTTC
AGCAAGTAAAACACCGGCTTCAGCATCCCGTTATGCCTGTGTCCTTGTGC
GTTGCGTCGTGTGACGTGGTGGTGGACTCTGCTGCTCAACCTCCAGATTC
ATCTTGGACAAGAAGATCGGGGTTGGACAGCCGAAGGTCGTCGAAAACGC
AAAGATCCTGATCGCCAACACCGCCATGGACACGGACAAAATCAAGATCT
ACGGCTCCCGAGTCAGGGTTGACTCGATGAACAAGGCAAGAGGAGGGGGG
AGGGAGTGCTCATATTTTGCATGCCTCAGCGGTTAGACCATCGACCATGG
GGGATGGGTATTGTTGAGGAAACGAGAGAAGCGTTGGGTGTGGGGTGGAA
TCGACCACGGCAGGGGGGGGAGAGGCAGATGGACACGCAGGCAGGCAGAC
AGGCGGTCGGTCAGGTAGAGCGAGCAGCCCTCTGTGAGGCAAGTTTGGGT
TTTCTTCCCTCAGCAAAACCGTTTCGTGTTGTTCATTGGCCCCTTTTTTA
GGGGGGGGGGGGATGCTTGTTCTTTGTTACTGTGGAATTAATGAAAATGG
GCATTCGTGGCTGAAGCCGAAGTAGACACGATGGACAAGTCTAGACAGCA
GTGGACGGAGTAGGGGTGGGGGAAGAGTCTTGCTGTGCGTGCACGAGAAT
CGAGATGAGGTGCAACCATTGGTATTTTTATGCACATGTCGGTGAAGTTT
TAGAGACGACGACGTTGTTGAGGGAGGAACTCTTGCGTGTCATATTGCCA
TCTGGCGTGCACCTGTTTTCCATCTTTCAATGTCCCTGCCGCTTCAGAGC
TAAAAAATGACCTTCTGGCACGTATGCCTGCAGCCATGCGGTTGTTCGTC
GGCGTCGTAAATGTGGATCCTCCTGCTGGTAATGCTAAAGCTGTTGTGCA
TTTGATGTTTTTAAAGAAAAAATATAAGTACAAACACCGAAAGACTACCC
GTTCGAGAAAAAAGCCACAGTCATTTGATGTTTTTCAACGATGCATCTCC
TACGCATGACGTGACTGACGTGTGTTGAGCGGGTGGCGGAGGTCGCCGTT
TATTGGCTTCGTCAGCGTTGAGCCTCATGATGGTGAAGCTACAGCAGTAC
AGCCTGTGTGTTTTGCAAAGATGCAGCATCTCTGACGCATGGCGTTACGT
TACGTTGCGTTACGGGTGTTGGGTGTTGCACAGGTGGCGGAGATCGAGGA
GGCCGAGAAGGACAAGATGCGCAAGAAGTGCAAGAAGATCGTCGACCACG
GCATAAACGTCTTCGTCAACCGCCAGCTTATCTACAACTTCCCCGAACAG
GTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8498:2283..6485+

>mRNA_E_fasciculatus_S2_contig8498.16626.1 ID=mRNA_E_fasciculatus_S2_contig8498.16626.1|Name=mRNA_E_fasciculatus_S2_contig8498.16626.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=891bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8498:2283..6485+ (Ectocarpus fasciculatus EfasUO2)
CAGGCAGTGCTCAACGATAACGCCCAGGTGGACAAGGGCGACAACGCTCG
CCTGAGCTCCTTCGTGGGCGCCATCGCCATTGCAGACCTTGTCAAGACCA
CCCTTGGGCCCAAAGGTATGGATAAGATTTTGCAGTCTATGGGCAGCCGG
GACGGGGGCATCAGCGTGACCAACGACGGTGCAACAATCCTCCGAGCGAT
CCACGTCGACAACGCCGCGGCGAAGGTCGACAACAAATGTTCACGTTTTT
TTTTTTCGTTCGTTTGTTTGCAGGACGACGAGGTCGGCGATGGCACGACG
AGCGTCACCGTCCTTTGTGGGGAGCTGCTCAGGGAGGCTGAGAAGCTCGT
CAACCAACGCCTGCACCCACAGACGATCATCCAGGGGTGGCGATTGGCGA
CGGCGGCGGCCCGGAGAGTGCTCGCCGCCAGCGCGGAGGACAACGGGAAG
GATGACGCAAAGTTCCGAGAGGACCTCTACAACATCGCAAAGCCGACGTT
GAGCTCTAAGCTGCTCACGCACGAGAAGGACCGCTTCGCGGACCTTGCCG
TGAACGCCGTGCTCAGGCTCAAGGGGTCGGGTAACCTGGACTACATCCAG
ATCATCAAGATGCCGGGGGGTTCGCTGAAGGAGTCTTACCTCGAGGAGGG
ATTCATCTTGGACAAGAAGATCGGGGTTGGACAGCCGAAGGTCGTCGAAA
ACGCAAAGATCCTGATCGCCAACACCGCCATGGACACGGACAAAATCAAG
ATCTACGGCTCCCGAGTCAGGGTGGCGGAGATCGAGGAGGCCGAGAAGGA
CAAGATGCGCAAGAAGTGCAAGAAGATCGTCGACCACGGCATAAACGTCT
TCGTCAACCGCCAGCTTATCTACAACTTCCCCGAACAGGTG
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