mRNA_E_fasciculatus_S2_contig8491.16620.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: Midasin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 2.050e-122 Identity = 195/208 (93.75%), Postives = 202/208 (97.12%), Query Frame = 1
Query: 1 SKLDFSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSLAA 624
+ LDFSV+APTTS+NLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTD G+QTGQ TEGS G +ARFSWCDGVFLSALK G+WVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSF+CPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSLAA
Sbjct: 1252 ANLDFSVEAPTTSKNLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQTGQPTEGSAGNNARFSWCDGVFLSALKAGRWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFKCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSLAA 1459
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: Midasin (n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ9_9PHAE) HSP 1 Score: 340 bits (873), Expect = 1.140e-104 Identity = 171/185 (92.43%), Postives = 178/185 (96.22%), Query Frame = 1
Query: 1 SKLDFSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV 555
++LDFSV+APTTS+NLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAA GHELVRINLSEQTDVSDLFGSDLPVP TD G+ +GQQTEGSG TSARF+WCDGVFLSALK GKWVLLDELNLA QSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV
Sbjct: 70 AELDFSVKAPTTSKNLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAAAGHELVRINLSEQTDVSDLFGSDLPVPGTDSGELSGQQTEGSGATSARFTWCDGVFLSALKAGKWVLLDELNLAPQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV 254
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z947_9STRA) HSP 1 Score: 297 bits (760), Expect = 1.700e-89 Identity = 148/205 (72.20%), Postives = 171/205 (83.41%), Query Frame = 1
Query: 7 LDFSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSLA 621
L FS+ APTT+ NLRRVLRALQ+RKAVLLEGSPGVGKT+L++ALAAA GH LVRINLSEQTD+SDL GSDLPV +D F+WCDGVFL AL+ G WVLLDELNLA+Q+VLEGLNACLDHRAEV++PELGR+FRCPPTF+VFAAQNPL QGGGRKGLP+SFL+RFTKV+VD L PDDL++IA +FP+LA
Sbjct: 1395 LRFSLGAPTTARNLRRVLRALQLRKAVLLEGSPGVGKTALVTALAAAAGHPLVRINLSEQTDLSDLMGSDLPVAASDXXXXXXXXX------GPAFAWCDGVFLRALRAGHWVLLDELNLASQAVLEGLNACLDHRAEVFVPELGRAFRCPPTFRVFAAQNPLSQGGGRKGLPKSFLNRFTKVFVDALGPDDLMHIASGRFPALA 1593
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: VWFA (domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2Q5P2_PHYPN) HSP 1 Score: 290 bits (742), Expect = 4.700e-87 Identity = 143/205 (69.76%), Postives = 170/205 (82.93%), Query Frame = 1
Query: 13 FSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPV---PDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSL 618
FS++APTT NL RVLRA+Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP PD ++ D+ G+ T G G +S F WCDGVFL ALK G WVLLDELNLA+QSVLEGLN+CLDHR VYIPEL R F CPPTF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P+L
Sbjct: 1900 FSLKAPTTMSNLYRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDDNVDDKDGKHTNG-GSSSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTL 2103
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: Midasin (n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEM6_9STRA) HSP 1 Score: 289 bits (739), Expect = 1.190e-86 Identity = 145/204 (71.08%), Postives = 162/204 (79.41%), Query Frame = 1
Query: 7 LDFSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSL 618
L F + APTT NLRRVLRA+QI K +LLEGSPGVGKTSLISALA A+GHELVRINLSEQTD+SDL GSDLP+PD LGD+ T S F WCDG L A+K G WVLLDELNLA+QSVLEGLN+CLDHRA VYIPELG +F CP TF++FAAQNPL QGGGRKGLP+SFL+RFTKVYV+ L+ DDL I KFP L
Sbjct: 1968 LGFKLSAPTTGMNLRRVLRAMQISKPILLEGSPGVGKTSLISALATASGHELVRINLSEQTDISDLMGSDLPMPDEALGDEENTSTGSS------FKWCDGALLKAIKNGDWVLLDELNLASQSVLEGLNSCLDHRASVYIPELGETFHCPLTFRIFAAQNPLAQGGGRKGLPKSFLNRFTKVYVEALSKDDLQGIVEAKFPML 2165
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: Midasin (n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NH58_PHYIT) HSP 1 Score: 288 bits (737), Expect = 2.210e-86 Identity = 141/202 (69.80%), Postives = 167/202 (82.67%), Query Frame = 1
Query: 13 FSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSL 618
FS++APTT NL RVLRA+Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP + D+ G + G GG+S F WCDGVFL ALK G WVLLDELNLA+QSVLEGLN+CLDHR VYIPEL R F CPPTF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P+L
Sbjct: 1890 FSLKAPTTMSNLYRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDEDKDGNKANG-GGSSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTL 2090
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VCY6_9STRA) HSP 1 Score: 263 bits (671), Expect = 2.800e-86 Identity = 126/186 (67.74%), Postives = 155/186 (83.33%), Query Frame = 1
Query: 7 LDFSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVD 564
+ F++ APTTS NL RVLRA+Q++K +LLEGSPGVGKTSLISALA+ +GH+LVRINLSEQTD+SDL G+DLP+PD D+ + + + F WCDGV L A+K G WVLLDELNLA+QSVLEGLN+CLDHRA ++IPELG++F CP TF++FAAQNPL QGGGRKGLP+SFL+RFTKVYV+
Sbjct: 36 MSFNLSAPTTSMNLSRVLRAMQLKKPILLEGSPGVGKTSLISALASVSGHKLVRINLSEQTDISDLMGTDLPLPDESSYDE--ESVTETSPSKGNFRWCDGVLLKAIKRGDWVLLDELNLASQSVLEGLNSCLDHRANLFIPELGQTFDCPRTFRIFAAQNPLAQGGGRKGLPKSFLNRFTKVYVE 219
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: VWFA (domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQJ5_9STRA) HSP 1 Score: 287 bits (734), Expect = 5.600e-86 Identity = 142/205 (69.27%), Postives = 168/205 (81.95%), Query Frame = 1
Query: 4 KLDFSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSL 618
K FS++APTT NL RVLRA+Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP GD+ QTEG G TS F WCDGVFL ALK G WVLLDELNLA+QSVLEGLN+CLDHR VYIPEL R ++CPP+F+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++I + +P+L
Sbjct: 1891 KSSFSLKAPTTMSNLYRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAAS---GDENSGQTEG-GNTSGLFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREYKCPPSFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHITSSMYPTL 2091
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: VWFA (domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZMS6_PHYSP) HSP 1 Score: 286 bits (733), Expect = 7.630e-86 Identity = 141/204 (69.12%), Postives = 165/204 (80.88%), Query Frame = 1
Query: 13 FSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPD--TDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSL 618
FS++APTT NL RVLRA+Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP TD D + GG+S F WCDGVFL ALK G WVLLDELNLA+QSVLEGLN+CLDHR VYIPEL R F CPPTF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P+L
Sbjct: 1895 FSLKAPTTMSNLYRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPTDETDDNSSKPSQGGGSSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTL 2098
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Match: Midasin (n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UTY1_9STRA) HSP 1 Score: 286 bits (733), Expect = 7.630e-86 Identity = 142/205 (69.27%), Postives = 168/205 (81.95%), Query Frame = 1
Query: 13 FSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPV---PDTDLGDQTGQQTEGSGGTSARFSWCDGVFLSALKTGKWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSL 618
FS++APTT NL RVLRA+Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP P D D+ G+ ++ GG S F WCDGVFL ALK G WVLLDELNLA+QSVLEGLN+CLDHR VYIPEL R F CPPTF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P+L
Sbjct: 1920 FSLKAPTTMSNLYRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPADDTDDKGGKASQ-EGGASGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTL 2123 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8491.16620.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8491.16620.1 >prot_E_fasciculatus_S2_contig8491.16620.1 ID=prot_E_fasciculatus_S2_contig8491.16620.1|Name=mRNA_E_fasciculatus_S2_contig8491.16620.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=208bp SKLDFSVQAPTTSENLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATback to top mRNA from alignment at E_fasciculatus_S2_contig8491:3751..5669+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8491.16620.1 ID=mRNA_E_fasciculatus_S2_contig8491.16620.1|Name=mRNA_E_fasciculatus_S2_contig8491.16620.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1919bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8491:3751..5669+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8491:3751..5669+ >mRNA_E_fasciculatus_S2_contig8491.16620.1 ID=mRNA_E_fasciculatus_S2_contig8491.16620.1|Name=mRNA_E_fasciculatus_S2_contig8491.16620.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=624bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8491:3751..5669+ (Ectocarpus fasciculatus EfasUO2)back to top |