prot_E_fasciculatus_S2_contig849.16618.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI) HSP 1 Score: 144 bits (363), Expect = 2.510e-38 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
Query: 1 MHPEIRAFPSARFYQGRLTDAPCVRDQAAIPAPSPSSETTGSPALPSLGPCFPPFLLVDVSSGSERRAGNSYQNPREAS 79
MHPEIRAFPSARFY GRLTDAPCVRDQAAIPA SPSSETT ALP LGPCFPPFLLVDVSSGSERRAG+SYQNPREAS
Sbjct: 484 MHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQSPSSETT---ALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREAS 559
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: A0A6H5J8A4_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A4_9PHAE) HSP 1 Score: 132 bits (331), Expect = 4.660e-34 Identity = 65/75 (86.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query: 5 IRAFPSARFYQGRLTDAPCVRDQAAIPAPSPSSETTGSPALPSLGPCFPPFLLVDVSSGSERRAGNSYQNPREAS 79
+ A SARFY GRLTDAPCVRDQAAIPAPSPSSE TG ALP LGPCFPPFLLVDVSSGSERRAG+SYQNPREAS
Sbjct: 9 VPAGSSARFYNGRLTDAPCVRDQAAIPAPSPSSEATGPLALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREAS 83
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: A0A7S3XLJ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLJ6_HETAK) HSP 1 Score: 61.2 bits (147), Expect = 1.020e-9 Identity = 34/80 (42.50%), Postives = 40/80 (50.00%), Query Frame = 0
Query: 1 MHPEIRAFPSARFYQGRLTDAPCVRDQAAIPAPS--PSSETTGSPALPSLGPCFPPFLLVDVSSGSERRAGNSYQNPREA 78
MHP +RAFPS RFY G+L DAP + + PS PS CF PFL D++ E R G S QN EA
Sbjct: 51 MHPAVRAFPSKRFYNGQLADAPALASLGPLGIPSDWPSFHRHR---------CFAPFLFYDLTGSQEERIGTSVQNSAEA 121
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: A0A2P6VM64_9CHLO (Helicase sen1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VM64_9CHLO) HSP 1 Score: 55.5 bits (132), Expect = 4.420e-7 Identity = 34/81 (41.98%), Postives = 39/81 (48.15%), Query Frame = 0
Query: 1 MHPEIRAFPSARFYQGRLTDAPCVRDQAAIPAPSPSSETTGSPALPSLG-PCFPPFLLVDVSSGSERR--AGNSYQNPREA 78
MHP IR FPSA FYQGRL DA ++D P P G P P++ DVS G E+R G S N EA
Sbjct: 784 MHPAIRQFPSAHFYQGRLRDADSIQDM---------------PPAPFYGHPLMKPYVFFDVSKGQEQRREGGGSLSNRAEA 849
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: A0A835WJ40_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WJ40_9CHLO) HSP 1 Score: 54.7 bits (130), Expect = 8.170e-7 Identity = 31/74 (41.89%), Postives = 40/74 (54.05%), Query Frame = 0
Query: 1 MHPEIRAFPSARFYQGRLTDAPCVRDQAAIPAPSPSSETTGSPALPSLGPCFPPFLLVDVSSGSERRAGNSYQN 74
MHPEIRAFPSA FY+GRL D V AA P P +++ P+++ DV+ G E+ AG S N
Sbjct: 861 MHPEIRAFPSAFFYKGRLQDGESVLAAAARPPPFYAADL------------LKPYVVYDVAGGREQLAGRSRAN 922
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: A0A835TBP1_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TBP1_CHLIN) HSP 1 Score: 54.3 bits (129), Expect = 1.120e-6 Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 0
Query: 1 MHPEIRAFPSARFYQGRLTDAPCVRDQAAIPAPSPSSETTGSPALPSLGPCFPPFLLVDVSSGSERRAGNSYQNPREA 78
MHPEIRAFPSA FY+GRL D V AA P +++ P+++ DV+ G E+ AG S N EA
Sbjct: 836 MHPEIRAFPSAYFYKGRLQDGESVLAAAARPPAFYAADL------------LKPYVVYDVAGGREQLAGRSRANEAEA 901
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: A0A7S0KWM0_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KWM0_MICPS) HSP 1 Score: 53.9 bits (128), Expect = 1.300e-6 Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 0
Query: 1 MHPEIRAFPSARFYQGRLTDAPCVRDQ--AAIPAPSPSSETTGSPALPSLGPCFPPFLLVDVSSGSERRAG 69
MHP+I AFPSARFY G + DA V+++ A + +P +E SP FL VDV+SG E RAG
Sbjct: 40 MHPDISAFPSARFYAGAVRDADAVKNRRLARLFPMAPPNEWIRSP-----------FLFVDVASGREERAG 99
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: C1MVZ9_MICPC (Superfamily I helicase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MVZ9_MICPC) HSP 1 Score: 51.6 bits (122), Expect = 9.900e-6 Identity = 33/79 (41.77%), Postives = 40/79 (50.63%), Query Frame = 0
Query: 1 MHPEIRAFPSARFYQGRLTDAPCVRDQAAIPAPSPSSETTGSPALPSLGPCFPPFLLVDVSSGSERRAG-NSYQNPREA 78
MHPEIRAFPS FY+GRL RD ++ A P S P P ++L D S G E+R+ S NP EA
Sbjct: 863 MHPEIRAFPSRAFYEGRL------RDSESVIAAPPESYHASWPLRP--------YVLFDASQGKEKRSTVGSVSNPYEA 927
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: A0A7S0IFZ6_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IFZ6_MICPS) HSP 1 Score: 51.6 bits (122), Expect = 9.900e-6 Identity = 31/72 (43.06%), Postives = 37/72 (51.39%), Query Frame = 0
Query: 1 MHPEIRAFPSARFYQGRLTDAPCVRDQAA---IPAPSPSSETTGSPALPSLGPCFPPFLLVDVSSGSERRAG 69
MHP+I AFPSARFY G + DA VR + P +P+ PFL VDV+SG E RAG
Sbjct: 887 MHPDISAFPSARFYAGAVRDADVVRRRRLARLFPMAAPNEWLRS------------PFLFVDVASGREERAG 946
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Match: A0A835ZGC2_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC2_9STRA) HSP 1 Score: 50.8 bits (120), Expect = 1.610e-5 Identity = 31/78 (39.74%), Postives = 40/78 (51.28%), Query Frame = 0
Query: 2 HPEIRAFPSARFYQGRLTDAPCVRDQAAIPAPSPSSETTGSPALPSLGPCFPPFLLVDVSS-GSERRAGNSYQNPREA 78
HP IRAFPSARFY GRL+DA + +AA P + P P ++ D+ G+E + G S QN EA
Sbjct: 178 HPAIRAFPSARFYGGRLSDAAAIATRAAPPHAA--------------DPALAPLVVYDLGRHGAEEQHGVSLQNSDEA 241 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig849.16618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 13
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig849.16618.1 ID=prot_E_fasciculatus_S2_contig849.16618.1|Name=mRNA_E_fasciculatus_S2_contig849.16618.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=79bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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