prot_E_fasciculatus_S2_contig8487.16611.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8487.16611.1
Unique Nameprot_E_fasciculatus_S2_contig8487.16611.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length576
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8487.16611.1 vs. uniprot
Match: A0A6H5L565_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L565_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 8.470e-17
Identity = 73/117 (62.39%), Postives = 79/117 (67.52%), Query Frame = 0 
Query:    3 DNNNNRGRGRDDGLGVYGPNAPVPDQ-QRQGGGRRGSGGGPNYAEDAVARGQATXXXXXXAADGRDRGGGADDRDXXXXXXXXXXXXXXXXXXXRXXADDRDRDSRRGRGDSRXXGG 118
            ++NNNRG GRDDGLGVYGPNAPVP+Q QRQG     SGGG +YA+DA ARGQAT       AD RDRGGGAD RD   XXXXXXXXXX              RD+RRGRG SR  GG
Sbjct: 1221 EDNNNRGGGRDDGLGVYGPNAPVPEQHQRQGXXXXXSGGGHSYADDAAARGQATGGGGRRGADSRDRGGGADGRDGESXXXXXXXXXX--------------RDNRRGRGGSRDRGG 1323
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8487.16611.1 vs. uniprot
Match: D8LMD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 7.330e-12
Identity = 198/418 (47.37%), Postives = 205/418 (49.04%), Query Frame = 0 
Query:    6 NNRGRGRDDGLGVYGPNAPVPDQ-QRQGGGRRGSGGGPNYAEDAVARGQATXXXXXXAADGRDRG-----GGADDRDXXXXXXXXXXXXXXXXXXXRXXADDRDRDSRRGRGDSRXXGGXXXXXXXXXXXXXXXXXPXHXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGXXXAERGRSXXXXXXXXXXXXXAEMGRDSXXXXXXXXXXXXSRDSSRVGRHETRRNSXXXX-----DRDSRDRRGGGQGRXXXXXXXXXXXXGGECNRAAHGSSGGDGREDL---RAAGRRDGSRSPDRGREKRREHSREEADRRHHHSXXXXRGGGSGSMDRDYKGPGDGRRRASSRDGDHDGGKERFSPPGRSSRHGGGGYPDAAXXXXX---EGDGGSRIDEPHGRPSNEPGYGDDGGKGGSPESG 406
            NNRG GRDDGLGVYGPNAPVP+Q QRQGGGRRGSG       D+  RG  T        +GRDR      GGAD RD      XXXXXXXXXXXXX XX        RRGRG SR  GG XXXXXXXXX       P                           RR  G      G   XXXXXXXXXXXX       XXXX           SSRV RHE     XXXX     DRDSRDR       XXXXXXXXXXXX       AHGS            RAAGRRDGSRSPDRGREKRR+HSRE ADRR HHS    RG                                                    XXXXX   + DG SR+DEPH R S+EPGYGD GGKGGSPESG
Sbjct:    4 NNRGGGRDDGLGVYGPNAPVPEQHQRQGGGRRGSGXXXRRGADSRDRGGGT--------NGRDRDVGRMKGGADSRDRENSRRXXXXXXXXXXXXXXXXXXXXXX-XRRGRGGSRDRGGDXXXXXXXXXEELHRNPPPFSGGRSRNSSVNDSD-----------RRGSG------GDGSXXXXXXXXXXXXXXXXXXXXXXXERDGGSGGGAGSSRVDRHEXXXXXXXXXXXXXDDRDSRDRGXXXXXXXXXXXXXXXXXXXXXXRDLAHGSXXXXXXXXXXXXRAAGRRDGSRSPDRGREKRRDHSRE-ADRRQHHSQEGSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCDGRSRVDEPHDRASDEPGYGDHGGKGGSPESG 394
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8487.16611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L565_9PHAE8.470e-1762.39C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LMD7_ECTSI7.330e-1247.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..451

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8487contigE_fasciculatus_S2_contig8487:761..2715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8487.16611.1mRNA_E_fasciculatus_S2_contig8487.16611.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8487 761..2715 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8487.16611.1 ID=prot_E_fasciculatus_S2_contig8487.16611.1|Name=mRNA_E_fasciculatus_S2_contig8487.16611.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=576bp
MDDNNNNRGRGRDDGLGVYGPNAPVPDQQRQGGGRRGSGGGPNYAEDAVA
RGQATSGGGRRAADGRDRGGGADDRDRDGGRRSGGADSRDREGSRRGGAD
DRDRDSRRGRGDSRDRGGGGRADSRDRRGEEQHRNPPHSSGGRSRNSSVN
DSDRRGSGGDGSSRRSGGGGGAERGRSRDRGHRNRSRERDAEMGRDSGGG
GGGGSGGGGSRDSSRVGRHETRRNSGGGGDRDSRDRRGGGQGRGGDRGDS
RDGRGGGECNRAAHGSSGGDGREDLRAAGRRDGSRSPDRGREKRREHSRE
EADRRHHHSQEQARGGGSGSMDRDYKGPGDGRRRASSRDGDHDGGKERFS
PPGRSSRHGGGGYPDAASGGGGEGDGGSRIDEPHGRPSNEPGYGDDGGKG
GSPESGGGDGGGGGDGGGDGGGGGGGGRKDKKQKKDKKDKKEKKKKKDKD
KDRDSRSKGDGKKDHEEESAAAGIYPSRPPPAAPLPAPPSGDGSARKRAR
SPSPLPYQDDYDNDDDGADVGPSSRKKRNKRSSGSGKHRRKPDGGLDAAE
YSGGGGGGDNGSKTRGVGAKPRVVS*
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