mRNA_E_fasciculatus_S2_contig8478.16604.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT96_ECTSI) HSP 1 Score: 288 bits (738), Expect = 2.710e-93 Identity = 148/158 (93.67%), Postives = 150/158 (94.94%), Query Frame = 1
Query: 1 VTAIGCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXX--AAGAQVSRKLHQRLMGQVLDIPWGSRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDP 468
+ AIGCPVDGPSDRD NRNNVDDLSNWLVNDHKGHFLVWNISDHRS+ XXXXXXXXX AAG QVSRKLHQRL GQVLDIPWGSRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDP
Sbjct: 42 LLAIGCPVDGPSDRDANRNNVDDLSNWLVNDHKGHFLVWNISDHRSNXXXXXXXXXXXXXAAGTQVSRKLHQRLQGQVLDIPWGSRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDP 199
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: FMN (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE) HSP 1 Score: 295 bits (756), Expect = 7.450e-90 Identity = 150/158 (94.94%), Postives = 152/158 (96.20%), Query Frame = 1
Query: 1 VTAIGCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXX--AAGAQVSRKLHQRLMGQVLDIPWGSRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDP 468
+ AIGCPVDGPSDRD NRNN+DDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXX AAG QVSRKLHQRL GQVLDIPWGSRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDP
Sbjct: 42 LLAIGCPVDGPSDRDANRNNIDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXXXAAGTQVSRKLHQRLQGQVLDIPWGSRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDP 199
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPS6_SAPPC) HSP 1 Score: 87.0 bits (214), Expect = 5.990e-17 Identity = 50/155 (32.26%), Postives = 74/155 (47.74%), Query Frame = 1
Query: 1 VTAIGCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXAAGAQVSRKLHQRLMGQVLDIPWG-SRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKR 462
V G PVDGP+D+ NN +L +L ++H +L++N+ D A +S Q L+ W R Y P H+ R+CY+I WL LDPEN+A ++C NGK R+ V++ACY F + A + + KR
Sbjct: 41 VLVGGRPVDGPTDKKACVNNAVELKMYLEDEHANRYLIFNLCDDEV---------------AAISP--------QTLEFSWERDGGLRTYTPPSDHIFRICYAIFAWLALDPENVAVIYCHNGKTRSGVVVACYFLFSRLVDDPMTALAQFYQKR 172
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Uncharacterized (protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR71_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.850e-16 Identity = 46/151 (30.46%), Postives = 72/151 (47.68%), Query Frame = 1
Query: 13 GCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXAAGAQVSRKLHQRLMGQVLDIPWGSRNR-RCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKR 462
G +DGP+D+ + NN ++ ++L H G ++V+N++D +D + Q LD W R Y P H+ R+CY+I WL LD EN+A ++C NGK R+ V+ ACY F + A + + KR
Sbjct: 51 GHAIDGPTDKKSCVNNAGEMKSYLDAAHAGKYVVFNLNDESADTAV---------------------ISPQTLDFSWERDGGIRTYTPPSDHIFRICYAIFAWLALDAENVALLYCHNGKTRSGVICACYFLFVRTVDDPMSALAQFYQKR 180
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TS83_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.320e-15 Identity = 49/151 (32.45%), Postives = 73/151 (48.34%), Query Frame = 1
Query: 13 GCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXAAGAQVSRKLHQRLMGQVLDIPWGSRNR-RCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKR 462
G VDGP+D+ + NN ++ +L H G ++V+N++D +D A V + Q LD W R Y P H+ R+CY+I WL LD EN+A ++C NGK R+ V+ ACY F + A + + KR
Sbjct: 52 GRAVDGPTDKMSCVNNATEMKAYLDAAHNGKYVVFNLTDDNAD--------------APV-------ISPQTLDFTWERDGGIRTYTPPADHIFRICYAIFAWLALDAENVALLYCHNGKTRSGVICACYFLFVRTVDDPMSALAQFYQKR 181
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Uncharacterized (protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CSC2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.460e-15 Identity = 45/151 (29.80%), Postives = 71/151 (47.02%), Query Frame = 1
Query: 13 GCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXAAGAQVSRKLHQRLMGQVLDIPWGSRNR-RCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKR 462
G +DGP+D+ + NN ++ ++L H G ++V+N++ +D + Q LD W R Y P H+ R+CY+I WL LD EN+A ++C NGK R+ V+ ACY F + A + + KR
Sbjct: 51 GHAIDGPTDKKSCVNNAGEMKSYLDAAHAGKYVVFNLNAESADTAV---------------------ISPQTLDFSWERDGGIRTYTPPSDHIFRICYAIFAWLALDAENVALLYCHNGKTRSGVICACYFLFVRTVDDPMSALAQFYQKR 180
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B2R3_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.530e-15 Identity = 45/151 (29.80%), Postives = 71/151 (47.02%), Query Frame = 1
Query: 13 GCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXAAGAQVSRKLHQRLMGQVLDIPWGSRNR-RCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKR 462
G +DGP+D+ + NN ++ ++L H G ++V+N++ +D + Q LD W R Y P H+ R+CY+I WL LD EN+A ++C NGK R+ V+ ACY F + A + + KR
Sbjct: 51 GHAIDGPTDKKSCVNNAGEMKSYLDAAHAGKYVVFNLNAESADTAV---------------------ISPQTLDFSWERDGGIRTYTPPSDHIFRICYAIFAWLALDAENVALLYCHNGKTRSGVICACYFLFVRTVDDPMSALAQFYQKR 180
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Formin-homology (2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVV8_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.570e-15 Identity = 48/151 (31.79%), Postives = 73/151 (48.34%), Query Frame = 1
Query: 13 GCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXAAGAQVSRKLHQRLMGQVLDIPWGSRNR-RCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKR 462
G PVDG +D+ + NN +L +L +H G +L++N+ D ++ A VS+ Q L+ W R Y P + R+CY+I W LDPEN+A ++C NGK R+ V+ ACY F + A + + KR
Sbjct: 57 GRPVDGTTDKKSCVNNAAELKAYLEEEHHGRYLLFNLCDDVNE-------------AAIVSK--------QTLEFAWEREGGIRTYTPPSDQIFRICYAIFAWHALDPENVAVLYCHNGKTRSGVVCACYFLFSRIADEPITALAQFYQKR 186
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC67_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.150e-14 Identity = 45/155 (29.03%), Postives = 70/155 (45.16%), Query Frame = 1
Query: 1 VTAIGCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXAAGAQVSRKLHQRLMGQVLDIPWGSRNR-RCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKR 462
+ G ++GP+D+ + NN +L +L H G +L++N D SD + + Q +D W R Y P + R+CY+I WL LD EN+A ++C NGK R+ V+ ACY F + A + + KR
Sbjct: 44 LLVAGRAIEGPTDKKSCTNNAVELKTYLDAAHAGKYLLFNFCDENSDA---------------------ETISSQTVDFSWEREGGIRTYTPPSDSIFRICYAIFAWLALDSENVAMLYCHNGKTRSGVISACYFLFARTVDEPMAALAQFYQKR 177
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Match: Aste57867_4360 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBM7_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.910e-14 Identity = 46/151 (30.46%), Postives = 72/151 (47.68%), Query Frame = 1
Query: 13 GCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGXXXXXXXXXAAGAQVSRKLHQRLMGQVLDIPWGSRNR-RCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKR 462
G +DGP+D+ + NN ++ +L H G +L++N+ D +D A +S Q +D W R Y P H+ R+CY+I WL LD +N+A ++C NGK R+ V+ ACY F + A + + KR
Sbjct: 48 GRAIDGPTDKKSCTNNALEMKVYLDAAHAGKYLLFNLCDDNADT-------------AAISP--------QTVDFSWERDGGIRTYTPPSDHIFRICYAIFAWLALDSDNVAMLYCHNGKTRSGVICACYFLFIHTVDDPMSALAQFYQKR 177 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8478.16604.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8478.16604.1 >prot_E_fasciculatus_S2_contig8478.16604.1 ID=prot_E_fasciculatus_S2_contig8478.16604.1|Name=mRNA_E_fasciculatus_S2_contig8478.16604.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=156bp VTAIGCPVDGPSDRDTNRNNVDDLSNWLVNDHKGHFLVWNISDHRSDNGGback to top mRNA from alignment at E_fasciculatus_S2_contig8478:5319..6361+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8478.16604.1 ID=mRNA_E_fasciculatus_S2_contig8478.16604.1|Name=mRNA_E_fasciculatus_S2_contig8478.16604.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1043bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8478:5319..6361+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8478:5319..6361+ >mRNA_E_fasciculatus_S2_contig8478.16604.1 ID=mRNA_E_fasciculatus_S2_contig8478.16604.1|Name=mRNA_E_fasciculatus_S2_contig8478.16604.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=468bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8478:5319..6361+ (Ectocarpus fasciculatus EfasUO2)back to top |