mRNA_E_fasciculatus_S2_contig847.16597.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ14_ECTSI) HSP 1 Score: 634 bits (1636), Expect = 4.160e-219 Identity = 353/370 (95.41%), Postives = 360/370 (97.30%), Query Frame = 2
Query: 161 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDGSAGVGSPASSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXAPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFSDLLRTQASTLEVELALERSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMNYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGEEYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGAAFADTYVSDFLFAYGGGQR 1270
MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSL D SAGVGS SSRSRAXXXXXXXXXXXXXXXXXXXXXXXXX PRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFF+DLLRTQASTLE ELAL RSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRM+YLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGE+YAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFS +MMYARWGPKEEADGFM+KVVMPAFREC+QAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTS FGA+FADTYVSDFLFAYGGGQR
Sbjct: 1 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLADASAGVGS---SSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEFELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECMQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLFAYGGGQR 367
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q7_9PHAE) HSP 1 Score: 293 bits (751), Expect = 1.150e-89 Identity = 184/192 (95.83%), Postives = 186/192 (96.88%), Query Frame = 2
Query: 161 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDGSAGVGSPASSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXAPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFSDLLRTQASTLEVELALERSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMNYLDTPDMQV 736
MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTD SAGVGS SSRSRAXXXXXXXXXXXXXXXXXXXXXXXXX PRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFF+DLLRTQASTLEVELAL RSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRM+YLDTPDMQV
Sbjct: 1 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDASAGVGS---SSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEVELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQV 189
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: 15,16-dihydrobiliverdin:ferredoxin (oxidoreductase n=8 Tax=Microcystaceae TaxID=1890449 RepID=I4IE70_9CHRO) HSP 1 Score: 106 bits (265), Expect = 5.900e-22 Identity = 59/194 (30.41%), Postives = 114/194 (58.76%), Query Frame = 2
Query: 674 YTGDRVRKVRMNYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPGEEYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGAAFADTYVSDFLF 1249
Y + RK+R Y++ + Q++++V Y + +D PLLG+ +A G ++L LD QPLF ++Y KY + +++IR+KYP L ++L YY + +FS +++A K +A+ + K + PA++E IQ Y +++ +A + ++ ++ Q ++DR+ AER+ + +S FG +++ ++ FLF
Sbjct: 58 YQCPQFRKIRYTYINAGETAQIFNSVIYPSYNYDLPLLGIDFLAFGKKKILVVLDFQPLFRDQDYLTKYIEP---MRSIRDKYPDLAQDLPMKYYDANQYFSPYLLFA----KTDAETVV-KQLFPAYQEFIQLYWQLLEKAQP-LTSAAAQEPIIAAQKDYDRYSAERDPASGLFSSYFGQEWSEKFLHQFLF 242
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: 15,16-dihydrobiliverdin:ferredoxin (oxidoreductase n=27 Tax=Moorena TaxID=1155738 RepID=A0A6P0SIH7_9CYAN) HSP 1 Score: 99.8 bits (247), Expect = 1.220e-19 Identity = 63/223 (28.25%), Postives = 121/223 (54.26%), Query Frame = 2
Query: 596 LERSPVPRCMDTVCNPERRSR--VRNLIYTGDRVRKVRMNYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPGEEYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIVNQA-PAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGAAFADTYVSDFLF 1249
L P+P ++ + + R +++ Y +RK+R Y+D P QV+++V Y + +D PLLG+ ++ G ++L LD QPLF E Y KY + ++AIR++Y L + L +Y + +FS +++A+ E ++ V A+++ + Y ++V QA P P Q +++ Q ++D++ A+R+ + +S FG +A+ ++ +FLF
Sbjct: 19 LSSQPIPPGLERQVSDRAKHRAIIQSWCYQCPELRKIRYTYMDVGPASQVFNSVIYPSHCYDLPLLGIDFLSFGKKKILVVLDFQPLFRDEAYQEKYIEP---MRAIRDRYQDLAQNLEMKFYDANQYFSKYLLFAKIDSLET----VKTQVFEAYKDYLALYWQMVEQAQPLTDPEDI--QRIVKAQKDYDQYSADRDPAHGLFSSYFGPEWAEQFLYEFLF 232
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: 15,16-dihydrobiliverdin:ferredoxin (oxidoreductase n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=K9PVB2_9CYAN) HSP 1 Score: 99.4 bits (246), Expect = 2.300e-19 Identity = 59/195 (30.26%), Postives = 110/195 (56.41%), Query Frame = 2
Query: 674 YTGDRVRKVRMNYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPGEEYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIV-NQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGAAFADTYVSDFLF 1249
Y +RK+R Y++ M Q++++V Y + G+D PLLG+ +A G ++L LD QPLF E Y KY + +KAIR++Y +L ++L +Y + +FS +++A K +AD + + +PAF+E + Y ++ N P P + + + ++D++ A+R+ + S FG +++ ++ +FLF
Sbjct: 47 YQSPELRKIRYTYINAGKMAQIFNSVLYPSYGYDMPLLGIDFLAFGQKKILVVLDFQPLFRDEGYMEKYIEP---VKAIRDRYDELAQDLPMRFYDAAQYFSPYLLFA----KTDADTVVNSL-LPAFKEYLDLYCTMLKNLKPTDDPERIAK--ITQAHKDYDQYSADRDPAAGLFNSYFGHEWSEQFLHEFLF 231
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GVA5_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.050e-19 Identity = 68/208 (32.69%), Postives = 113/208 (54.33%), Query Frame = 2
Query: 638 NPERRSRVRNLIYTGDRVRKVRMNYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLAL-DLQPLFPGEE-YAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIV-NQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGAAFADTYVSDFLF 1249
N ++ +R+ N+ + D RK+RM Y D QV+++V Y P ++ P+LG+ +A + LA+ D QP+ EE +A Y LK IR+ YP L + +Y + FFS M+++R+ E + PAF+ I +V+++ N P S + VLERQA +D + AER+ +LT+ FG ++++Y+ +FLF
Sbjct: 201 NEQKGARIVNMCFESDEYRKIRMTYYDAGQKTQVFNSVWYPHPKYNLPILGVDVLAFNQQKYLAITDYQPIHDAEEKHACTYEHL---LKPIRDDYPNLKGRMSNKFYDENQFFSKQMVFSRF----EDVNVVHDEFYPAFQRYIMTHVDLLQNTKPDENMRSM--RFVLERQASYDTYSAERDPALGLLTAMFGTDWSESYMREFLF 399
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U630_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.290e-19 Identity = 78/283 (27.56%), Postives = 138/283 (48.76%), Query Frame = 2
Query: 449 LAPPELQLQSDEGFEGEPLAWTESLGSGGP---LFFSDLLRTQASTLEVELALERSPVPRCMDTVC---------NPERRSRVRNLIYTGDRVRKVRMNYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLAL-DLQPLFPGEEYAAKYA--DANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGAAFADTYVSDFLF 1249
L+PP + +E + W S+ + G L + Q S ++ L+ R+ VP C D N ++++R+ N+ D RK+RM Y D QV++++ Y P ++ P+LG+ ++ + L + D QP+ +E A +A D KLK+IR Y L ++ +Y + FFS M++ R+ + + + + VMPAF+ +Q + ++V T VL+RQA +D + AER+ + + FG +++ +V DFLF
Sbjct: 65 LSPPLSIMTIEEAESRHEMPWKTSIDNDGDDSSLLYMPFWEWQISFIQKNLSNVRA-VP-CSDPNIHQHDYHYNENKQKKARIVNICLQSDEYRKIRMTYYDAGSKTQVFNSLWYPRPEYNLPVLGIDLLSFNQKKYLTIVDFQPI---QENEADHACSDYEEKLKSIRKDYKNLQGQMSPRFYDETLFFSKQMIFGRF----DTEKVVHEEVMPAFQRYVQTHYDMVLNTTPDVSSKSTSN-VLDRQAAYDSYSAERDPATKMFEAMFGVDWSEGFVHDFLF 337
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: 15,16-dihydrobiliverdin:ferredoxin (oxidoreductase n=1 Tax=Petrachloros mirabilis ULC683 TaxID=2781853 RepID=A0A8K2A7H3_9CYAN) HSP 1 Score: 98.2 bits (243), Expect = 3.970e-19 Identity = 56/200 (28.00%), Postives = 110/200 (55.00%), Query Frame = 2
Query: 659 VRNLIYTGDRVRKVRMNYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVR-VLALDLQPLFPGEEYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIVNQAPAHAPGSPTE-QAVLERQAEFDRFHAEREQVRPILTSNFGAAFADTYVSDFLF 1249
+R+ Y +RK+R Y+D Q+ ++V Y P ++ PLLG+ ++ G V+ ++ +D QPLF E+Y KY LK +R++YP L + L +Y + +FS +++A+ + +E V AF++ + Y +++ A P + Q +++ Q ++D++ A+R+ + +S FG +A+ ++ +FLF
Sbjct: 42 IRSWCYQCPELRKIRYTYIDAGSSAQILNSVIYPHPAYELPLLGIDFLSFGQVKNLIVMDFQPLFQDEDYLRKYIYP---LKQLRDRYPDLAQNLEMKFYDANQYFSQYLLFAKTDAQT-----VETRVFAAFKDYLDLYWQMLETAKPFT--EPVDIQRIVQAQKDYDQYSADRDPASGLFSSYFGHEWAERFLYEFLF 231
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DEG3_CYCTE) HSP 1 Score: 93.2 bits (230), Expect = 7.870e-17 Identity = 73/256 (28.52%), Postives = 126/256 (49.22%), Query Frame = 2
Query: 509 WTESLGSGGPLFFSDLLRTQASTLEVELALERSPVP-----RCMDTVCNPERRSRVRNLIYTGDRVRKVRMNYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMG--SVRVLALDLQPLFPGE-EYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGAAFADTYVSDFLF 1249
W S+ L F++ LE L+ R P+P +D + +S + NL + D RK+RM++ D +QV + Y P ++ P+LG+ G + ++A D QP+ E ++A Y +K IR KYP L + YY + F+ M+++R+ + + +++ V+PA +E +A+V ++ + P V+ERQA FD + AER+Q + + FG +A+ +V DFLF
Sbjct: 67 WNTSVSPNQRLVFAEFWNWHLDFLESNLSNLR-PLPATNRDNSIDFSLVQDEKSHMVNLCFRSDEYRKIRMSHFDGGKQIQVLQALWYPDPKYNLPVLGIEMAQFGGGTGHMMASDFQPIHDSESDHAVLYTPL---IKKIREKYPLLQGRMSDRYYDYT-HFNDFMLFSRF----DDERYIDTDVVPAVKEYTRAHVNMIQELKPDDTAIPK---VMERQAAFDTYFAERDQAIHMFKAKFGKQWAEDFVYDFLF 310
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Match: 15,16-dihydrobiliverdin:ferredoxin (oxidoreductase (Fragment) n=1 Tax=Moorena sp. SIO3B2 TaxID=2607827 RepID=A0A845XVK2_9CYAN) HSP 1 Score: 81.3 bits (199), Expect = 9.150e-14 Identity = 50/170 (29.41%), Postives = 91/170 (53.53%), Query Frame = 2
Query: 596 LERSPVPRCMDTVCNPERRSR--VRNLIYTGDRVRKVRMNYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPGEEYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSGNMMYARWGPKEEADGFMEKVVMPAFRECIQAYVEIVNQA 1093
L P+P ++ + + R +++ Y +RK+R Y+D P QV+++V Y + +D PLLG+ +A G ++L LD QPLF E Y KY + ++AIR++Y L + L +Y + +FS +++A+ E ++ V A+++ + Y ++V QA
Sbjct: 19 LSSQPIPPGLERQVSDRAKHRAIIQSWCYQCPELRKIRYTYMDVGPVSQVFNSVIYPSHCYDLPLLGIDFLAFGKKKILVVLDFQPLFRDEAYQEKYIEP---MRAIRDRYQDLAQNLEMKFYDANQYFSKYLLFAKIDSLET----VQTEVFEAYKDYLALYWQMVEQA 181 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig847.16597.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig847.16597.1 >prot_E_fasciculatus_S2_contig847.16597.1 ID=prot_E_fasciculatus_S2_contig847.16597.1|Name=mRNA_E_fasciculatus_S2_contig847.16597.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=371bp MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDGSAGVback to top mRNA from alignment at E_fasciculatus_S2_contig847:16251..26211+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig847.16597.1 ID=mRNA_E_fasciculatus_S2_contig847.16597.1|Name=mRNA_E_fasciculatus_S2_contig847.16597.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=9961bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig847:16251..26211+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig847:16251..26211+ >mRNA_E_fasciculatus_S2_contig847.16597.1 ID=mRNA_E_fasciculatus_S2_contig847.16597.1|Name=mRNA_E_fasciculatus_S2_contig847.16597.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1113bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig847:16251..26211+ (Ectocarpus fasciculatus EfasUO2)back to top |