mRNA_E_fasciculatus_S2_contig8452.16584.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E_fasciculatus_S2_contig8452.16584.1
Unique Name	mRNA_E_fasciculatus_S2_contig8452.16584.1
Type	mRNA
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR1_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 4.150e-188
Identity = 266/273 (97.44%), Postives = 269/273 (98.53%), Query Frame = 1

Query:    1 FFRTSGGNPGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCVDRRSREGAWQSRPAQA 819
            F + +G  PGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLD+ALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCVDRRSREGAWQSRPAQA
Sbjct:  112 FDKATGETPGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCVDRRSREGAWQSRPAQA 384

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP7_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 1.390e-146
Identity = 217/224 (96.88%), Postives = 220/224 (98.21%), Query Frame = 1

Query:    1 FFRTSGGNPGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMK 672
            F +T+G  PGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFE NRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLD+ALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMK
Sbjct:  298 FDKTTGETPGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFECNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMK 521

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: AAA (domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A329T291_9STRA)

HSP 1 Score: 344 bits (883), Expect = 2.530e-112
Identity = 161/247 (65.18%), Postives = 211/247 (85.43%), Query Frame = 1

Query:   31 WDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 771
            WDSLAGY  VK EIEDT++L L++PE+Y+ IA+KTR ++ESNRPRAVLFEGPPGTGKT+SAR+IA ++  PM+H+P+E+++SKWYG+SEKK+SAIFDAC+++ GAIIFIDE+DALAG RS G MHEA+RR+LSV+LQKVEGF    K  ++CATNRK DLD+ALISRF LSI++ LPD TTRR VFG YAKQLS  EL  LA +++ +S RD+KE C++AER+WASK+++ +ET+ELP+L+ Y++ V
Sbjct:  321 WDSLAGYEKVKLEIEDTVVLALQNPELYERIAQKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDETTRRAVFGRYAKQLSDEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETTELPTLRTYMEAV 567

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: AAA (domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3V9_9STRA)

HSP 1 Score: 338 bits (866), Expect = 8.520e-112
Identity = 157/247 (63.56%), Postives = 209/247 (84.62%), Query Frame = 1

Query:   31 WDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 771
            WDSLAGY DVK EIEDT++L L++PE+Y+ IA+KTR ++ESNRPRAVLFEGPPGTGKT+SAR+IA ++  PM+H+P+E+++SKWYG+SEKK+SAIFDAC+++ GAIIFIDE+DALAG RS G MHEA+RR+LSV+LQKVEGF    K  ++CATNRK DLD+ALISRF L I++ LPD  TRR V+  YAKQLS+ +L  LAT++  +S RD+KE C++AER+WASK+++ +ET E+P+L+ Y++ V
Sbjct:  165 WDSLAGYQDVKLEIEDTVVLALQNPELYERIAQKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLCIRYNLPDEKTRRAVYSRYAKQLSEEDLLQLATVSPQLSCRDIKEICEYAERKWASKVLKKEETGEVPTLRTYMEAV 411

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: AAA (domain-containing protein n=24 Tax=Phytophthora parasitica TaxID=4792 RepID=W2GL19_PHYPR)

HSP 1 Score: 343 bits (879), Expect = 9.840e-112
Identity = 160/247 (64.78%), Postives = 211/247 (85.43%), Query Frame = 1

Query:   31 WDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 771
            WDSLAGY  VK EIEDT++L L++PE+Y+ IARKTR ++ESNRPRAVLFEGPPGTGKT+SAR+IA ++  PM+H+P+E+++SKWYG+SEKK+SAIFDAC+++ GAIIFIDE+DALAG RS G MHEA+RR+LSV+LQKVEGF    K  ++CATNRK DLD+ALISRF LSI++ LPD  TRR VFG YA+QLS+ EL  LA +++ +S RD+KE C++AER+WASK+++ +ET+ELP+L+ Y++ V
Sbjct:  320 WDSLAGYEKVKLEIEDTVVLALQNPELYERIARKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFGRYARQLSEEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMEAV 566

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: AAA (domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=G4YPN9_PHYSP)

HSP 1 Score: 341 bits (875), Expect = 3.610e-111
Identity = 162/247 (65.59%), Postives = 209/247 (84.62%), Query Frame = 1

Query:   31 WDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 771
            WDSLAGY  VK EIEDT++L L++PE+Y+ IA+KTR ++ESNRPRAVLFEGPPGTGKT+SAR+IA ++  PM+H+P+E+++SKWYG+SEKK+SAIFDAC+++ GAIIFIDE+DALAG RS G MHEA+RR+LSV+LQKVEGF    K  ++CATNRK DLD+ALISRF LSI++ LPD  TRR VF  YAKQLS  EL  LATI+  +S RD+KE C++AER+WASK+++ +ET+ELP+LK Y++ V
Sbjct:  317 WDSLAGYEKVKLEIEDTVVLALQNPELYERIAQKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFARYAKQLSDDELGQLATISPQLSCRDIKEICEYAERKWASKVLKKEETTELPTLKTYMEAV 563

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: Aaa-type (atpase family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Q2_PLAHL)

HSP 1 Score: 338 bits (866), Expect = 1.050e-110
Identity = 159/247 (64.37%), Postives = 207/247 (83.81%), Query Frame = 1

Query:   31 WDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 771
            W+SLAGY  VK EIEDT++L L++PE+Y+ IA KTR ++ESNRPRAVLFEGPPGTGKT+SAR+IA ++  PMVH+P+E+++SKWYG+SEKK+SAIFDAC+++ GAIIFIDE+DALAG RS G MHEA+RR+LSV+LQKVEGF    K  ++CATNRK DLD+ALISRF LSI++ LPD  TRR VFG YAKQLS  ELQ +A +++ +S RD+KE C++AER+WASK++R  ETSE+P  + Y++ +
Sbjct:  246 WESLAGYEKVKAEIEDTIVLALQNPELYERIAEKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMVHLPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYDLPDKKTRRAVFGRYAKQLSDEELQHMAAVSSHLSCRDIKEICEYAERKWASKVLRKTETSEVPDTQAYLEAI 492

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: ATPase (n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X213_9STRA)

HSP 1 Score: 340 bits (871), Expect = 1.570e-110
Identity = 160/247 (64.78%), Postives = 208/247 (84.21%), Query Frame = 1

Query:   31 WDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 771
            WDSLAGY  VK EIEDT++L L++PE+Y+ IA+KTR ++ESNRPRAVLFEGPPGTGKT+SAR+IA ++  PM+H+P+E+++SKWYG+SEKK+SAIFDAC+++ GAIIFIDE+DALAG RS G MHEA+RR+LSV+LQKVEGF    K  ++CATNRK DLD+ALISRF LSI++ LPD  TRR VF  YAKQLS  EL  LA ++  +S RD+KE C++AER+WASK+++ +ET+ELP+L+ Y+D V
Sbjct:  320 WDSLAGYEKVKLEIEDTVVLALQNPELYERIAQKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDENTRRAVFARYAKQLSDEELLQLAAVSPQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMDAV 566

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: AAA (domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTY0_9STRA)

HSP 1 Score: 339 bits (870), Expect = 2.160e-110
Identity = 159/247 (64.37%), Postives = 208/247 (84.21%), Query Frame = 1

Query:   31 WDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 771
            WDSLAGY +VK EIEDT++L L++PE+YD IA+KTR ++ESNRPRAVLFEGPPGTGKT+SAR+IA ++  PM+H+P+E+++SKWYG+SEKK+SAIFDAC+++ GAIIFIDE+DALAG RS G MHEA+RR+LSV+LQKVEGF    K  ++CATNRK DLD+AL+SRF LSI++ LPD  TRR VF  YAKQLS  EL  LA ++  +S RD+KE C++AER+WASK+++ +ET ELP+L+ Y++ V
Sbjct:  320 WDSLAGYENVKLEIEDTVVLALQNPELYDRIAQKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLNGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALVSRFDLSIRYNLPDEKTRRAVFARYAKQLSDEELTELAAVSPQLSCRDIKEICEYAERKWASKVLKKKETMELPTLQTYMEAV 566

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BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAA4_HETAK)

HSP 1 Score: 329 bits (843), Expect = 2.540e-110
Identity = 157/261 (60.15%), Postives = 206/261 (78.93%), Query Frame = 1

Query:   16 GGNPGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITA-GMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCVDRRSREGA 795
            GG   WDSLAGY  +K+E+EDT+IL L+HPE YD IARKTR +FESNRPRA+LFEGPPGTGKT++AR+IA R+D+PMVHV VE+IMSKWYGESEKKL+ IF+ACDE+GGAIIFIDE+DALA SR TG MHEATRRVLSV+LQ++EGF  G +N L+CATNR+ DLD+AL++R+ L+++F LPD   R  +   YA+ L+  +L+ LA   + G++ RD+KE  + AER  A+ L+R + T E PS  EY+ C+++R  + +
Sbjct:   15 GGGLDWDSLAGYDYIKREVEDTIILALKHPEAYDSIARKTRQRFESNRPRAILFEGPPGTGKTLTARIIANRADKPMVHVNVESIMSKWYGESEKKLAQIFEACDELGGAIIFIDEIDALATSRDTGQMHEATRRVLSVVLQRIEGFRGGGQNTLVCATNRRQDLDAALLNRYDLTLRFDLPDPQARAAILARYARHLAPADLRRLAGAPSEGLAARDLKEAAEQAERARAAALLRKEATGETPSFDEYMKCIEKRQHQSS 275

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.

BLAST of mRNA_E_fasciculatus_S2_contig8452.16584.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
AAA	4.150e-188	97.44	domain-containing protein n=1 Tax=Ectocarpus silic...	[more]
AAA	1.390e-146	96.88	domain-containing protein n=1 Tax=Ectocarpus sp. C...	[more]
AAA	2.530e-112	65.18	domain-containing protein n=4 Tax=Phytophthora Tax...	[more]
AAA	8.520e-112	63.56	domain-containing protein n=3 Tax=Phytophthora ker...	[more]
AAA	9.840e-112	64.78	domain-containing protein n=24 Tax=Phytophthora pa...	[more]
AAA	3.610e-111	65.59	domain-containing protein n=9 Tax=Phytophthora Tax...	[more]
Aaa-type	1.050e-110	64.37	atpase family protein n=1 Tax=Plasmopara halstedii...	[more]
ATPase	1.570e-110	64.78	n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0...	[more]
AAA	2.160e-110	64.37	domain-containing protein n=2 Tax=Peronospora effu...	[more]
Hypothetical	2.540e-110	60.15	protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8452	contig	E_fasciculatus_S2_contig8452:2875..6626 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	0
Seed ortholog score	533.1
Seed ortholog evalue	7.6e-149
Seed eggNOG ortholog	2880.D8LIR1
Model size	822
Hectar predicted targeting category	other localisation
Exons	7
EggNOG free text desc.	ATP binding
EggNOG OGs	COG0464@1,KOG0730@2759
Cds size	822
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8452.16584.1	prot_E_fasciculatus_S2_contig8452.16584.1	Ectocarpus fasciculatus EfasUO2	polypeptide	E_fasciculatus_S2_contig8452 2875..6626 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1696842504.3982992-CDS-E_fasciculatus_S2_contig8452:2874..2943	1696842504.3982992-CDS-E_fasciculatus_S2_contig8452:2874..2943	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig8452 2875..2943 -
1696842504.4098725-CDS-E_fasciculatus_S2_contig8452:3425..3506	1696842504.4098725-CDS-E_fasciculatus_S2_contig8452:3425..3506	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig8452 3426..3506 -
1696842504.4290204-CDS-E_fasciculatus_S2_contig8452:3938..4083	1696842504.4290204-CDS-E_fasciculatus_S2_contig8452:3938..4083	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig8452 3939..4083 -
1696842504.4410203-CDS-E_fasciculatus_S2_contig8452:4573..4656	1696842504.4410203-CDS-E_fasciculatus_S2_contig8452:4573..4656	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig8452 4574..4656 -
1696842504.4508438-CDS-E_fasciculatus_S2_contig8452:4813..5027	1696842504.4508438-CDS-E_fasciculatus_S2_contig8452:4813..5027	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig8452 4814..5027 -
1696842504.461639-CDS-E_fasciculatus_S2_contig8452:5589..5714	1696842504.461639-CDS-E_fasciculatus_S2_contig8452:5589..5714	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig8452 5590..5714 -
1696842504.4767752-CDS-E_fasciculatus_S2_contig8452:6521..6626	1696842504.4767752-CDS-E_fasciculatus_S2_contig8452:6521..6626	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig8452 6522..6626 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E_fasciculatus_S2_contig8452:2875..6626-
coding sequence from alignment at E_fasciculatus_S2_contig8452:2875..6626-

protein sequence of mRNA_E_fasciculatus_S2_contig8452.16584.1

>prot_E_fasciculatus_S2_contig8452.16584.1 ID=prot_E_fasciculatus_S2_contig8452.16584.1|Name=mRNA_E_fasciculatus_S2_contig8452.16584.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=274bp
FFRTSGGNPGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFE
SNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEK
KLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVE
GFEKGSKNILICATNRKDDLDSALISRFQLSIQFGLPDATTRREVFGLYA
KQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSL
KEYVDCVDRRSREGAWQSRPAQA*

mRNA from alignment at E_fasciculatus_S2_contig8452:2875..6626-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E_fasciculatus_S2_contig8452.16584.1 ID=mRNA_E_fasciculatus_S2_contig8452.16584.1|Name=mRNA_E_fasciculatus_S2_contig8452.16584.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3752bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8452:2875..6626- (Ectocarpus fasciculatus EfasUO2)
TTTTTCAGGACCTCGGGGGGAAACCCAGGATGGGATTCTCTCGCGGGGTA
CGCGGACGTGAAGCAGGAGATCGAGGACACTCTCATTTTGCCGCTCAGAC
ACCCGGTAAGTAAGAAGCCTCACGGTGACGGTGCCCCCGGTCGTTGCCAA
GGGTGCTTCTGCTGCCATGGTGTGTTTACTTGATGTGTGTGGTGATGACC
TAAAAAAAGGGTAAAATCTACCTTCAAGGATGTCAAGGCCGAACCCCTCT
GTTCATAGATGTCTCCTTCACGTCCGGTGCCAAGCACCGTTGGTTTGATG
GGCTAAGGAATCATCCGGTCAGAAAAGAGACAGATTGAAAGAACAAAAGG
TCAATACTCCTGTCAAAGTGATGGAGACAAAAAGAGACAGACAGACAAAA
ATCAACAATGCGCCGCCCCATCAGATGGGGCAGAATGATGGCATCCGCCC
TCGTGGGCAACCCACGTCCATCCTCCCTGCGTAGTACTCGCCATAGCCAC
AGCGGTACTATTAGCGTTGGGGAGAATAATCATGGCCGTTTGTGCGTGAG
TCGTGGTCCATATTTGGAGGGAGACAGGTCGGGGTGTGAGATGTCTTGGC
AAAATGGAACCACCGACACACATTTACAAGGCAAGCAACGCAGAGCGAAC
TTGGAGCAAGGAAAATGAATCACTTCTCTCTCTTTTTCTCTCTCTCCCTC
TGTCCCCTCCATCCCCCCCCCCGCCTCTCTATCAGATAGAATGACTGATC
CTTTCGTTCTTTCTCTCTCTACTCCCTCAGACCGCATGATTCCTTTGCCA
ACTCCAGACTTTCCTCCCTTACTCGGTATTTTCCTCGCTCTTTCTCTCCT
TGTCTCTGCCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTGTCTCCCCTTG
TGCCTGAGACAGGAGGTGTACGATGTCATCGCTCGCAAGACGCGCACACA
GTTCGAGAGCAACCGCCCCCGCGCAGTACTGTTCGAGGGACCCCCGGGCA
CGGGCAAGACAGTGAGCGCGAGGGTCATCGCTGGGAGGTGAATTGAAGTG
AATCAAGCTCACCGCTGCTGTTCCCGTTTTTTCCTTGTCTCTTGTTGGCA
TTAGTTCGGTACTGGTCGAACGCTGGTGCTGATTTTCCTGGTCTCTTGTT
GGCGTTATTAAATGTATTGGTTGAACGTGGTAGGTACTGGTTCCTTGTCT
CTTTGTTGGCGATATATATATATATATTTTTTTTTTTTTCTATTTTTTTA
AGGCTTTTCGTGTGTGTCAATTTTGTTCGCGTGACGTTGGTATGGCATGA
CTTGGATTCACTCCGTTATTTTTGGGCCGAATTTGTTTTTGAGCCATTAT
ACTGTTAACAAGTGCTGTTCATTGTCTTGAGGCACACCCCTTGTTTCTGC
ACCACAAGCTGTTGTCCTTTTGTTTCAATTGTACATCTTTCTACCAAAGT
CTGAATCAGACCTCTACTTTTGTTTGGTTGTGTTGCGTTCAGGTTATTCG
TTTGTATCTGCACCAAAATGCAGGTGTCGACTACTGTTTGGTTATTCTTA
CGGTCATGATTGTTCATTTGTACCTGTACAAAAATAAAACGTCCTGTAGA
TCCGACCGTCCGATGGTCCACGTCCCGGTGGAGAACATCATGTCCAAGTG
GTACGGCGAGTCGGAGAAGAAGCTGAGCGCTATCTTCGACGCGTGCGACG
AGATGGGGGGAGCGATCATCTTCATCGACGAGGTTGACGCCCTGGCAGGG
TCTAGGTCGACGGGAGGCATGCACGAGGCCACCCGCCGCGTGCTCTCGGT
CATCCTGCAGAAGGTGATGGTGGTGACGTGGTCGTGGCGTTATTCTTGTT
GTCCGATACCGATGTCTGCACGCGATAAGACAACGTCGACTGACTGCACA
CGACTCTCGATGTTGCATCCTCTGATCTATGGTTTCCTCCTCCTTTGTTT
GATTTTTCCCTTGCTCGCAGGTGGAAGGCTTCGAAAAGGGATCGAAGAAC
ATTCTCATCTGCGCCACCAACAGGAAAGACGACCTCGACTCGGCCCTCAT
CAGGTTAGTGCGTTCCTTCACATCACAACACCACTTTTGGTTTGTTTTCT
TGCACCACAGGGGAAGAAAAACGGTGCTGATTTCGAAATCACAGCATGCC
TTAATTTTTGTGTTCTTTCACTTCGAGACAGAAGAATAGGATTGGTTCTG
GTTTTGCGTCACAACATGGCTTTATTTTATGTTTTTCGTTCACTCCGAGG
CATGTTGTTCCCTCTCTGCAACCAAGTCCACCAATCGAAGCAGTCTTGCC
CCAGCCCGGCACACGATGCTCAAATTCGTAAGAACGAAAATAGATAAAAA
CGTTTGGCTTGCTTTGTTCCCCCGTGCTTCGTCATTACTCTCATTATCAC
CCCCAGGACAAGAAAGAACAAAAAAAGAAACGCTGCTGCTCTAAGCCAAC
CACCCCCACGGGTATCGTTCTAAGGTTACGCGTTTTTCAACGATTTGGTT
CGTCGTTTTGGTGTCGCCTCGTCGTCTCTCCCAACTCCTGTAGCCGGTTC
CAGCTGTCGATCCAGTTTGGGCTGCCTGACGCTACCACCCGTCGCGAGGT
ATTCGGGCTGTACGCCAAGCAGCTCTCCCAGCACGAGCTGCAGACTCTGG
CCACGATCACCGCGGGGATGTCTGGCCGGGACATGAAGGTGGGGGGCGGG
GGGTGCTTTTGAGAGGTGTCGCATGATGTGATTGATTTTGCCTTTTGTCA
GTTTTCTGCAGCAGCTGCAGCAGTAGCAGCAGCAGTAGTAGTAGTTGTGG
TTGTTGATGCTGCTATGGTCGATGTCGTCGTTGTCGTTGTCGTTGTGTTG
ATGATGCTACTGATGTCGAAATGTCGCTTGCTGTTGCGGTCGTACATCGT
CGCTGTTGCTGCTACTGTTGCTGCTGTTGTCGTTGTCGTTGTGTGGTTGA
TGACGGTGTCAAACTGTCTCTTGTACTCTTGTACCCCCTCGAACCCGAAG
CGGGCTGCAGGGATCCGCCTCACCGGCTGGCTGCAGAAAGGGTCTACGCC
ACTTTCCTCACTGTCGCTTTACGGATGTCAATGGTATTGCTGCCGCACCT
GACCTGACTGCCCGTGACAGGAGACTTGCCAACACGCCGAGCGTCGGTGG
GCGTCGAAGCTGGTGCGAGGGCAGGAGACGAGCGAGCTTCCCTCGTTGAA
GGTGAGGGGCGAGAGAGAGAGAGGCAGGAGGGGGAGAGAGGAAGCCCTTA
CAAAGCGATAATACTTGTACCCGGGAGAGGATGGATGATGGGTGATTTTT
CCGGCGTTTATATTGTGCCCAGCCTCTTCGTCTGTGAAGGCCACATTTAC
GACTTGGATATTAGTCGCACGCACATATAAGAAATATTCGAGGGAAAGTA
GAATGGTAGAGGGTGACGAGACGACTTTCGAACTCTACCTTCTCCAGCAG
GTGCTTGCGTGCCTTTTCCCACAGTTCCACGCCGTCATGATGTTGGTGTG
ATTTCTCTTTCGTTCAGTTCCATTAAAGTAGCGCAGGTCTTTGCCCGCAG
GAACCGAAGAGCGTGTTATTCCCAATTGGGACGCACGGGCAAAAGCTTCG
TGTACCCACTCACACCCATGTCGTTCGCTTCCCCCGAACATCGAACATCC
TTCCAATGACCCCCCCGCCCCCCCACGGAATAGGAGTATGTGGATTGCGT
CGACAGGCGTAGCCGGGAGGGTGCTTGGCAATCCCGACCCGCCCAAGCAT
AG

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8452:2875..6626-

>mRNA_E_fasciculatus_S2_contig8452.16584.1 ID=mRNA_E_fasciculatus_S2_contig8452.16584.1|Name=mRNA_E_fasciculatus_S2_contig8452.16584.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=822bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8452:2875..6626- (Ectocarpus fasciculatus EfasUO2)
TTTTTCAGGACCTCGGGGGGAAACCCAGGATGGGATTCTCTCGCGGGGTA
CGCGGACGTGAAGCAGGAGATCGAGGACACTCTCATTTTGCCGCTCAGAC
ACCCGGAGGTGTACGATGTCATCGCTCGCAAGACGCGCACACAGTTCGAG
AGCAACCGCCCCCGCGCAGTACTGTTCGAGGGACCCCCGGGCACGGGCAA
GACAGTGAGCGCGAGGGTCATCGCTGGGAGATCCGACCGTCCGATGGTCC
ACGTCCCGGTGGAGAACATCATGTCCAAGTGGTACGGCGAGTCGGAGAAG
AAGCTGAGCGCTATCTTCGACGCGTGCGACGAGATGGGGGGAGCGATCAT
CTTCATCGACGAGGTTGACGCCCTGGCAGGGTCTAGGTCGACGGGAGGCA
TGCACGAGGCCACCCGCCGCGTGCTCTCGGTCATCCTGCAGAAGGTGGAA
GGCTTCGAAAAGGGATCGAAGAACATTCTCATCTGCGCCACCAACAGGAA
AGACGACCTCGACTCGGCCCTCATCAGCCGGTTCCAGCTGTCGATCCAGT
TTGGGCTGCCTGACGCTACCACCCGTCGCGAGGTATTCGGGCTGTACGCC
AAGCAGCTCTCCCAGCACGAGCTGCAGACTCTGGCCACGATCACCGCGGG
GATGTCTGGCCGGGACATGAAGGAGACTTGCCAACACGCCGAGCGTCGGT
GGGCGTCGAAGCTGGTGCGAGGGCAGGAGACGAGCGAGCTTCCCTCGTTG
AAGGAGTATGTGGATTGCGTCGACAGGCGTAGCCGGGAGGGTGCTTGGCA
ATCCCGACCCGCCCAAGCATAG