prot_E_fasciculatus_S2_contig8444.16576.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8444.16576.1
Unique Nameprot_E_fasciculatus_S2_contig8444.16576.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length35
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8444.16576.1 vs. uniprot
Match: D7G7C0_ECTSI (Conserved oligomeric Golgi complex subunit 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C0_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 3.760e-6
Identity = 30/35 (85.71%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:    1 MSASATAAAAPGREGDHAEMEQEPVELSEAYVQSL 35
            MSASATAA A  REGDHAE EQEPVELSEAYV SL
Sbjct:    1 MSASATAAVA-AREGDHAEQEQEPVELSEAYVHSL 34
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8444.16576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7C0_ECTSI3.760e-685.71Conserved oligomeric Golgi complex subunit 8 n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8444contigE_fasciculatus_S2_contig8444:3985..4089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8444.16576.1mRNA_E_fasciculatus_S2_contig8444.16576.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8444 3823..4089 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8444.16576.1 ID=prot_E_fasciculatus_S2_contig8444.16576.1|Name=mRNA_E_fasciculatus_S2_contig8444.16576.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=35bp
MSASATAAAAPGREGDHAEMEQEPVELSEAYVQSL
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