mRNA_E_fasciculatus_S2_contig8440.16574.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSC2_ECTSI) HSP 1 Score: 314 bits (804), Expect = 2.580e-101 Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 3
Query: 12 MAGDGPSVLEEQPVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
MAGDGPSVLEEQPVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLV+D KEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID
Sbjct: 1 MAGDGPSVLEEQPVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 152
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ00_9STRA) HSP 1 Score: 120 bits (302), Expect = 8.010e-29 Identity = 66/146 (45.21%), Postives = 89/146 (60.96%), Query Frame = 3
Query: 36 LEEQPVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRT--ALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
L EQPVS +EA L++KAK +VE++MG+ +L DF L F +++A YL E Y L ALPDL WN++D+RVD++N RV T RL+GTH G L Y + + P+ RVE PE VSV FD +G +T GF +D
Sbjct: 61 LREQPVSEEEATTLVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPTLSKAQYLKE----YGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDA-TGRCAALTTGFPMD 201
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Uncharacterized (protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRP9_9CHLO) HSP 1 Score: 96.3 bits (238), Expect = 9.940e-22 Identity = 58/156 (37.18%), Postives = 84/156 (53.85%), Query Frame = 3
Query: 27 PSVLEEQPVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARA---------DYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
P P+ +DE IAL K + +++ GV+ ++L DFRF + +A D++ +G L+ A P++ + YD+RVDKY NRVW T R T TH GPL + Y P+G V APEC+S TF+E+ G T TGG+ +D
Sbjct: 12 PGTPSSFPIPSDELIALAQK---VFKSNSGVEQPELLADDFRFEFPVVSLAKKASCCLSSIICDFVKAVSG--FNLKQAFPNMESHPYDWRVDKYEPNRVWFTVRNTATHAGPLTFFGATYKPTGKVVLGAPECLSYTFNEE-GKVTSFTGGYIMD 161
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Uncharacterized (protein n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XMF5_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 5.540e-21 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 3
Query: 48 PVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
P+S +E LI+KAK++ +A G++ D L DFRF + + + +YL + L+ A PD+ ++YD+RVD + NRVW T+R+T TH G L + + ++ P+ V APEC S TF+ + G T TGG+ +D
Sbjct: 54 PISKEE---LIEKAKSVFKAGTGLERPDDLADDFRFEFPIIS-LPKKEYLAAVSS--FRLKEAFPDINPHAYDFRVDPFEPNRVWFTSRVTATHKGALKFGDMKFDPTNKLVFGAPECQSYTFNAE-GKVTSFTGGYIMD 186
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Amidase (signature enzyme n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YKW7_COCSC) HSP 1 Score: 97.4 bits (241), Expect = 1.290e-20 Identity = 57/147 (38.78%), Postives = 83/147 (56.46%), Query Frame = 3
Query: 27 PSVLEEQPVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
P P+ A++ IAL K + + GV+ D+L +FRF + +A+ D++ +G L+ A P++ + YD+RVDKY NRVW T R T TH GPL + Y P+G V APEC+S TF+E+ G T TGG+ +D
Sbjct: 12 PGTPSSFPIPAEKLIALAQK---VFATNSGVEDPDLLADNFRFEFPVVS-LAKKDFVKAVSG--FNLKDAFPNMESHPYDWRVDKYEPNRVWWTVRNTATHTGPLRFFGATYKPTGKVVLGAPECLSYTFNEE-GKVTSFTGGYIMD 151
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Amidase (signature enzyme n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YCA2_9CHLO) HSP 1 Score: 90.5 bits (223), Expect = 5.790e-19 Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 3
Query: 75 LIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
LI AK + + G K L DFRF + +++ +YL + TG + L A P+L + Y +RVD Y NRVW TTR+T TH GPL + K + + +V APEC+S TF+E+ G T TGG+ +D
Sbjct: 102 LISMAKQLFGSSSGQKDPSALSDDFRFEFPIVS-LSKEEYL-KATGTF-NLEEAFPNLASHPYHWRVDPYEPNRVWFTTRVTATHAGPLKFFGKSFKATNKKVLGAPECLSYTFNEQ-GKCTGFTGGYIMD 228
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U424_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.350e-16 Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 3
Query: 69 IALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
+ ++ K + AD G+ D + D + +A Y E ++ +A PDL +D RVD+ + N+VW TTR+TGTH + D + Y PSG + E+ PE SVTFD+ + + ++T GF +D
Sbjct: 43 VPIVAKTMDFIRADFGLSNPDSVADDAIYRTPDKITKTKAAYFDEMKQLFSVW-SAFPDLQLRVHDVRVDEEDANKVWFTTRVTGTHTKTIEIDGERYSPSGEKYESPPEVFSVTFDDANEVVRRVTAGFVVD 174
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Hypothetical (protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2F2T3_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 3.750e-13 Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 3
Query: 48 PVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
P++ DE LI++ I++ +G ++AD L DF+F+ G +A+ ++L + G + + T PD+ N Y +RVD + +RVW T+R G H G + P+GIRV P+ +S+TF+ + G K T G +D
Sbjct: 6 PITPDE---LIERTNEILKRGVG-EMADDLALDFQFVGPVVGPLAKEEFL-KAIGTF-DVTTGFPDMQSNYYHFRVDPFEPDRVWFTSRPVGRHTGTFAGSIE---PTGIRVVCPPQAMSMTFN-RQGEVKKFTVGAVMD 135
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Rhodanese (domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HCK4_9CHLO) HSP 1 Score: 72.8 bits (177), Expect = 5.080e-12 Identity = 47/140 (33.57%), Postives = 79/140 (56.43%), Query Frame = 3
Query: 48 PVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
P++ DE LI++ I++ +G ++AD L DF+F+ G +A+ ++L + G + + T PD+ N Y +RVD + +RVW T+R G H G + P+GIRV P+ +S+TF+ +S + K T G +D
Sbjct: 688 PITPDE---LIERTNEILKRGVG-EMADDLALDFQFVGPVVGPLAKEEFL-KAIGTF-DVTTGFPDMQSNYYHFRVDPFEPDRVWFTSRPVGRHTGTFAGSIE---PTGIRVVCPPQAMSMTFNRQSEVK-KFTVGAVMD 817
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I0A4_9CHLO) HSP 1 Score: 72.0 bits (175), Expect = 7.220e-12 Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 3
Query: 48 PVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVYDEKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCID 467
P+ +D ALID+ K I++ +G K+AD DF+F+ G +A+ +L + T PDL N Y +RVD + +RVW T+R GTH G +G +V P+ +S+TF+ + G K+T G +D
Sbjct: 204 PIKSD---ALIDRTKEILKRGVG-KMADDFAEDFQFVGPVVGPLAKDAFLKAINS--FDITTGFPDLRSNYYHFRVDPFEPDRVWYTSRPVGTHTGKFA---GRIDATGTKVICPPQAMSMTFN-REGQVKKLTVGVVMD 333 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8440.16574.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8440.16574.1 >prot_E_fasciculatus_S2_contig8440.16574.1 ID=prot_E_fasciculatus_S2_contig8440.16574.1|Name=mRNA_E_fasciculatus_S2_contig8440.16574.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=152bp MAGDGPSVLEEQPVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWback to top mRNA from alignment at E_fasciculatus_S2_contig8440:2399..4758- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8440.16574.1 ID=mRNA_E_fasciculatus_S2_contig8440.16574.1|Name=mRNA_E_fasciculatus_S2_contig8440.16574.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2360bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8440:2399..4758- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8440:2399..4758- >mRNA_E_fasciculatus_S2_contig8440.16574.1 ID=mRNA_E_fasciculatus_S2_contig8440.16574.1|Name=mRNA_E_fasciculatus_S2_contig8440.16574.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=456bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8440:2399..4758- (Ectocarpus fasciculatus EfasUO2)back to top |