mRNA_E_fasciculatus_S2_contig8430.16565.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: 30S (ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI) HSP 1 Score: 1009 bits (2608), Expect = 0.000e+0 Identity = 534/571 (93.52%), Postives = 541/571 (94.75%), Query Frame = 3
Query: 3 GEARKLVLSMRQKPRASNAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGESPRSAPVAATKDVSHLAGSDPSEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSPDRSITSENIHSHYEEGQEVEIRIMEVNTGNNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXN-DRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGNDEGXXXXXXXXXXXXXXXXXGMDSAAFGREDFADTTQGGEGGGGADWQQFLNNYFDDKE 1712
GEARKLVLSMRQKPR+S+AEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVL+VGQVVDVRIREVDEKLGRINMSLLPYGQGE+PRSAPVAATKDVSHLAGSDP+EFRKGTVSAVADYGLFVNIEGVDGLLHVSKMS DRSITSENIHSHYEEGQEVEIRIMEVNT NNKMSLSMLPPTEEADFGRYT+VPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATG NMG XXXX DRRG KKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQN+PRGARGKKDVSVLLGRDPDEFI GRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYG DEG XXXX MDSAAFGREDFADTTQ ADWQQFLNNYFDDKE
Sbjct: 180 GEARKLVLSMRQKPRSSSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYG-DEGFGAEGGRRGRGGGXXXXXMDSAAFGREDFADTTQXXXXXXXADWQQFLNNYFDDKE 749
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: 30S (ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA) HSP 1 Score: 420 bits (1080), Expect = 6.040e-136 Identity = 254/592 (42.91%), Postives = 354/592 (59.80%), Query Frame = 3
Query: 12 RKLVLSMRQKPRASNAEQ-GNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGESPRSAPVAATKDVSHLAGSDPSEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSPDRSITSENIHSHYEEGQEVEIRIMEVNTGNNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGE-RVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGAT--GSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGN--IDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGNDEGXXXXXXXXXXXXXXXXXGMDSAAFGREDFADTTQGGE-------------------GGGGADWQQFLNNYFDDKE 1712
+KLVL+MR PRA++ +Q ++ YA++LA DP + + VE++V YGAF L +GCSGF+HISQ+ P E V++VSDV++VGQ V VR+R+VD+ L R+N+SLLP S AATKDVS LA +D + FR GTVSAV DYG FV ++GVDGLLH+SK+ ++T + GQEV +RI+ V+ NK+SL+M+ E D EEW+EG+VVS YGAFV L +DGMVHIS+L GE RVD+V + + +G V+VR++E P++RK+RL+MRE G A G+ GG RG + K V + + EEW+ G+V S T FGAFVA+ DGLLH+S++A V +D L GQE++VRVI+VD + R+GLS+R+ R+ A +D+SVL G D F+ G V S+V YG FV ++ I+GL+H+S+++ RV+ V DV G +VQVR+ +++ D VNLSM+P G+ DRS G D AA +D +D GE GGG ADWQ++LN YF+ K+
Sbjct: 141 KKLVLTMRTSPRAAHIQQEADLSPYAEILATDPGRMLPGTVESVVRYGAFVRLAEGCSGFLHISQLKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSGATS-----AAATKDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIEEGVALTPAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISEL---GEGRVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGAAEAAPRGAASGGARRG---RGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARR-----APVSRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGSAKDRS-------------------RNARRGTGEDGAA---DDASDPFGTGERRKSPRPRFNDYEDSALNVGGGEADWQKYLNQYFEKKD 694
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: 30S (ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA) HSP 1 Score: 352 bits (902), Expect = 6.660e-109 Identity = 211/540 (39.07%), Postives = 308/540 (57.04%), Query Frame = 3
Query: 6 EARKLVLSMRQKPR--ASNAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDG------------CSGFVHISQMSPTGEHVADVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGESPRSAPVAATKDVSHLAGSDPSEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSPDRSITSENIHSHYEEGQEVEIRIMEVNTGNNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNAPR-----------GARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIE--GNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGNDEG 1544
+AR+L LSMR R A +V YA LA DP++F+ V+ ++ GAF L G GF+H SQ+ P E V D D LS GQ V VRIREVD +L RI++SLLP +G S+ +A +DVS + G+DP+EFR GTV ++ +YG+FV ++GVDGLLH S++ R ++ + + + GQ+V +R+ V+T N++SLSM+PP D R+ +P + W++G V + +GAFV + VDG+VHISQL + +V + V +G VRVR++E DP R XXXX RRG+K V +++ PE W+ G VA++ FGAFV +D DGL+H SQI ED L GQ V+VRV+ D + RL LSM +P + A G+ +DVSVL G DPD F+ G V S++P+G FV ++ G + GL+H+SE++ GRV+ V +V G ++VR+ +++T ++LSM+ G+ DR+ G G+D G
Sbjct: 146 DARRLSLSMRAGGRRMAHALSADDVAPYAAQLAADPARFIVGTVQLVLRSGAFVALAGGGEGGXXXXXXXXAVGFLHASQLRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIEEGRQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPERRXXXXXXXXXXXXXXXXXXX--XXXXXXRRGVK---DVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQICGG--GGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRSGSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGSAKDRAHRGGGSDGG 678
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: RpsA (protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SBN0_9DINO) HSP 1 Score: 186 bits (472), Expect = 5.160e-49 Identity = 121/296 (40.88%), Postives = 165/296 (55.74%), Query Frame = 3
Query: 648 RYTDVPSEEWLEG-----TVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDD----TDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGN---IDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAG 1499
+Y +P E+ G TV S++++GAFV + + DG++HIS++ ER+D+VY+ V+ GQ V V I K LTM EG T +D G + + F +LSP+EW G V+ FGAFV V + DGL+H+SQI + V NV+D L GQEVQVRV VDVD R+ LSMR G R D+S DE++ G+V + P+GAFV + N DGLVHI+++ G V+SVED GQEVQVRI ++ DN ++LSM PAG
Sbjct: 189 KYPPIPFEQLEVGQKYTATVRSVLDFGAFVDIGAESDGLLHISRMS--SERIDNVYDFVQEGQQVEVWI-SGKRDDGKFGLTM----VEGMT----------DDAGGRRAPADLTPFQDLSPDEWQKGVVSRTAPFGAFVTVTLEGGASADGLVHVSQIKDGFVDNVDDELSAGQEVQVRVQSVDVDAGRMSLSMRSGXXXXXXGFREPADLSAFEAISSDEWLTGKVARLAPFGAFVTVTANDASADGLVHITQIRDGFVESVEDELSEGQEVQVRIESVDADNGKMSLSMKPAG 467
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: RpsA (protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XR85_SYMPI) HSP 1 Score: 181 bits (458), Expect = 4.060e-47 Identity = 125/310 (40.32%), Postives = 172/310 (55.48%), Query Frame = 3
Query: 621 PPTEE--ADFGRYTDVPSEEWLE------GTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDD----TDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMRE--PRQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGN---IDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAG 1499
P T E A +Y +P E+ LE GTV S++++GAFV + + DG++HIS++ ER+D++Y+ V+ GQDV V I K LTM EG T D G + + F +LSP++W G VA FGAFV V + DGL+H+SQI + V NV+D L +GQEVQVRV VD+D R+ LSMR R D++ DE++ G+V + P+GAFV + N DGLVHI+++ G V+SVED GQEVQVRI ++TDN ++LSM PAG
Sbjct: 167 PETSEVKAQDMKYPPIPFEK-LEVGQKYTGTVRSVLDFGAFVDIGAESDGLLHISRMSK--ERIDNIYDFVQEGQDVDVWI-SGKRDDGKYGLTM----VEGMT-----------DDGGRRAPADLTPFQDLSPDDWQKGVVARTAPFGAFVTVTLEGGASADGLVHVSQIKDGFVDNVDDELSVGQEVQVRVQSVDIDAGRMSLSMRAGFXXXXXXXXFREPADLTAFAEVSSDEWMTGKVARLAPFGAFVTVTANDVSADGLVHITQIRDGFVESVEDELSEGQEVQVRIESVDTDNGKMSLSMKPAG 457
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: S1 (RNA-binding domain-containing protein n=1 Tax=Oligosphaeraceae bacterium TaxID=2699751 RepID=A0A7X7MGL5_9BACT) HSP 1 Score: 178 bits (452), Expect = 9.040e-47 Identity = 109/377 (28.91%), Postives = 204/377 (54.11%), Query Frame = 3
Query: 402 PSEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSPDRSITSENIHSHYEEGQEVEIRIMEVNTGNNKMSLSMLPPTEEADFGRYTDV--PSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEW-ISGRVASITHFGAFVAVDDDTDGLLHISQIAEDH-VSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSG 1520
P + R+G V + ++G FV+++G+DGLLH++ MS R + H + G E+E+ I++++ ++SL + +E + DV P + G VV++M YGAF+ L+ ++G+VH+S++ +++ + +++G++V IL + RK+ L +R+ +A E P I G+V ++T +GAFV + DD DG++H+S ++ ++N + LQ G EV+ ++EVD DN R+ LSM++ ++ + + + + + + G++ + +GAFV +EG IDGL+HISE++ RV+ V+DV ++G V+ R+ +I+ + + LSM + SG
Sbjct: 11 PKQIRRGVVKNITEFGAFVDLDGMDGLLHITDMSWGRV---SDPHEIVKVGDEIEVMILDIDKERQRVSLGL--KQKEGNPWDTVDVKYPKNTRIHGKVVNVMPYGAFIELEEGIEGLVHVSEMS-WTKKITRASDMLQVGEEVDAVILNVNKDDRKISLGLRQA-----------------------QANPWEVIKERFPSGTRIKGKVRNMTGYGAFVQIQDDIDGMIHVSDMSWTRKINNPNEVLQKGMEVEAVILEVDADNQRISLSMKQLTEDPWQNIQNRYAIG--------DSVEGKITKLASFGAFVELEGGIDGLIHISELSEERVNRVKDVVQVGDVVKARVKNISLEERRIGLSMKENVEFHQESG 350
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: 30S (ribosomal protein S1 n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X9G464_9BACT) HSP 1 Score: 182 bits (462), Expect = 3.430e-46 Identity = 117/379 (30.87%), Postives = 211/379 (55.67%), Query Frame = 3
Query: 402 PSEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSPDR-SITSENIHSHYEEGQEVEIRIMEVNTGNNKMSLSMLPPTEEADFGRYTDV--PSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSM-----VPAGAYDD 1511
P + R+G V + D+G FV++ G+DGLLH++ MS R S SE + ++G E+E+ I++V+ ++SL + +E + DV P + ++G VV++M YGAFV L+ ++G++H+S++ ++V+ + + IG +V +L+ + + RK+ L +R+ T N +G + I G+V ++T +GAFV + DD DG++H+S ++ +S+ + LQ G EV+ +++VD +N R+ LSM++ + + + K V + + G+V + +GAFV +EG IDGL+HISE++ V+ V+DV ++G V+ R+ +INTD + LS+ +PA D+
Sbjct: 198 PKQIRRGVVKNITDFGAFVDLNGMDGLLHITDMSWGRVSHPSEVV----KQGDEIEVMILDVDRERQRVSLGL--KQKEGNPWDTVDVKYPKDTRIKGRVVNVMPYGAFVELEEGIEGLIHVSEMS-WTKKVNRASDILNIGDEVEAMVLDVNKADRKISLGLRQ------TQPNPWEVIKERFPKGTR----------------IKGKVRNMTGYGAFVQIQDDIDGMIHVSDMSWVRKISHPSEILQKGMEVEAVILDVDAENQRISLSMKKLTDDPWQAIQNKYQVG--------QVVEGKVTKLASFGAFVELEGGIDGLIHISELSNEHVNRVKDVVQVGDVVKARVRNINTDERRIGLSLKDVDDIPAQVVDE 539
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: 30S (ribosomal protein S1 n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X8ZLE9_9BACT) HSP 1 Score: 181 bits (458), Expect = 3.620e-46 Identity = 112/371 (30.19%), Postives = 206/371 (55.53%), Query Frame = 3
Query: 402 PSEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSPDRSITSENIHSHYEEGQEVEIRIMEVNTGNNKMSLSMLPPTEEADFGRYTDV--PSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDH-VSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAY 1505
P + R+G V + D+G FV+++G+DGLLH++ MS R + H + G E+E+ I++++ ++SL + +E + DV P + G VV++M YGAF+ L+ ++G+VH+S++ +++ + +++G +V IL + RK+ L +R+ N +K E+F + + I G+V ++T +GAFV + DD DG++H+S ++ ++N + LQ G EV+ ++EVD DN R+ LSM++ ++ + + + D+ + + G+V + +GAFV +EG IDGL+HISE++ RV+ V+DV ++G V+ R+ +I+ + + LSM Y
Sbjct: 187 PKQIRRGVVKNITDFGAFVDLDGMDGLLHITDMSWGRV---SDPHEIVKVGDEIEVMILDIDKERQRVSLGL--KQKEGNPWDTVDVKYPKNTRIHGKVVNVMPYGAFIELEEGIEGLVHVSEMS-WTKKITRASDVLQVGDEVDAVILNVNKEDRKISLGLRQA--------------QPNPWEVIK-----EKFPSGTR---IKGKVRNMTGYGAFVQIQDDIDGMIHVSDMSWTRKINNPNEILQKGMEVEAVILEVDADNQRISLSMKQLTEDPWQNIQNRYDIG--------DVVEGKVTKLASFGAFVELEGGIDGLIHISELSEERVNRVKDVVQVGDVVKARVKNISLEERRIGLSMRENSEY 521
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: 30S (ribosomal protein S1 n=2 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7IYB8_9BACT) HSP 1 Score: 181 bits (458), Expect = 5.360e-46 Identity = 118/372 (31.72%), Postives = 206/372 (55.38%), Query Frame = 3
Query: 402 PSEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSPDR-SITSENIHSHYEEGQEVEIRIMEVNTGNNKMSLSMLPPTEEADFGRYTDV--PSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAE----DHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPA 1496
P + R+G V + ++G FV++ G+DGLLH++ MS R S SE + G+E+E+ I+EV+ ++SL + +E + DV P + ++G VV++M YGAFV L+ ++G++H+S++ ++V+ + + G +V +L+ + RK+ L +R+ T SN +G + I G+V ++T +GAFV + DD DG++H+S ++ +H S V LQ G EV+ +++VD D+ R+ LSM++ + + + K V + + G++ + +GAFV +EG IDGL+HISE++ RV+ V+DV ++G V+ R+ +INTD + LSM A
Sbjct: 195 PKQIRRGVVKNITEFGAFVDLNGMDGLLHITDMSWGRVSHPSEVVKV----GEEIEVMILEVDRERQRVSLGL--KQKEGNPWDTVDVKYPKDSRIKGRVVNVMPYGAFVELEEGIEGLIHVSEMS-WTKKVNRASDILHEGDEVEAVVLDVNKEDRKISLGLRQ------TQSNPWEVIKERYPKGTR----------------IKGKVRNMTGYGAFVQIQDDIDGMIHVSDMSWIRKINHPSEV---LQKGMEVEAVILDVDADHQRISLSMKKLTDDPWQTIQNKYQVG--------DVVEGKITKLASFGAFVELEGGIDGLIHISELSDERVNRVKDVVQVGDTVKARVKNINTDERRIGLSMKDA 526
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Match: 30S (ribosomal protein S1 n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CXG0_SYMMI) HSP 1 Score: 176 bits (447), Expect = 1.520e-45 Identity = 120/298 (40.27%), Postives = 165/298 (55.37%), Query Frame = 3
Query: 648 RYTDVPSEEW-----LEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGSNMGGXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDD----TDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREP--RQNAPRGARGKKDVSVLLGRDPDEFIAGRVVSIVPYGAFVNIEGN---IDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAG 1499
+Y +P E+ GTV S++++GAFV + + DG++HIS++ ER+D+VY+ V+ GQ V V I K LTM EG T D G + + F +LSP+E+ G VA FGAFV V + DGL+H+SQI + V NV+D L +G EVQVRV VD+D R+ LSMR R D+S G DE++ G+V + P+GAFV + N DGLVHI+++ G V+SVED GQEVQVRI ++TDN ++LSM PAG
Sbjct: 180 KYPPIPFEKLEVGQKYSGTVRSVLDFGAFVDIGSESDGLLHISRMSR--ERIDNVYDFVQEGQQVDVWI-SGKRDDGKYGLTM----VEGMT-----------DDGGRRAPADLTPFQDLSPDEFQKGVVARTAPFGAFVTVTLEGGASADGLVHVSQIKDGFVENVDDELSVGDEVQVRVQSVDLDAGRMSLSMRAGFGXXXXXXXFRQPADLSAFEGVSQDEWLTGKVARLAPFGAFVTVTANDVSADGLVHITQIRDGFVESVEDELSEGQEVQVRIESVDTDNGKMSLSMKPAG 459 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8430.16565.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8430.16565.1 >prot_E_fasciculatus_S2_contig8430.16565.1 ID=prot_E_fasciculatus_S2_contig8430.16565.1|Name=mRNA_E_fasciculatus_S2_contig8430.16565.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=562bp MRQKPRASNAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCback to top mRNA from alignment at E_fasciculatus_S2_contig8430:880..6699- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8430.16565.1 ID=mRNA_E_fasciculatus_S2_contig8430.16565.1|Name=mRNA_E_fasciculatus_S2_contig8430.16565.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5820bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8430:880..6699- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8430:880..6699- >mRNA_E_fasciculatus_S2_contig8430.16565.1 ID=mRNA_E_fasciculatus_S2_contig8430.16565.1|Name=mRNA_E_fasciculatus_S2_contig8430.16565.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1686bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8430:880..6699- (Ectocarpus fasciculatus EfasUO2)back to top |