mRNA_E_fasciculatus_S2_contig843.16564.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Nucleoporin_N (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI) HSP 1 Score: 1677 bits (4344), Expect = 0.000e+0 Identity = 984/1078 (91.28%), Postives = 996/1078 (92.39%), Query Frame = 2
Query: 5 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHGKPQEAGSPRNRRIQVRRTNFRAPTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGNPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGGDGNSTTQKACHNNVFNIWTRAARFCQGYGNGQSGLSHLTFKNPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQNQGAAGAAPVPADGXXXXXXXXXXXXQVRTAIFQPADGFPAKWERQPPSVYGAYCCSGVTVLAQALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVTEVGDSAAAQQQAMGRVWAISERPVTLTDNPETGRVRALLASSGAPSPSDNXXXXXXXXXXXXXXXXXXXXXXXXRAVVRVGRSSTSGAVVGGVVSRAKAWQRSSRYAARPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTWLRPVDLLYDLLARNHVEGVRLFFDDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXXAVAGSTGGGVGNPSTPAAYGVPGHTVRARALDAALMICKPPGFSSPGQPAGGGIGIG----GGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRDLEALRVPLESLRASIRTVFPRAVGEDLAAQASKEAKATAAADARRGAELLGEAAREWRGERALGADGQLARACAALTAVGRSEAVVDVCMTCAKNFGDGGXXXXXXXXXXXXXVEAWEEGVYQGGGIVGPVQREKARLECYERVLEAVVGLLKQEQQQQLRSV--AAGQGGVRGTKKVDSLIARCLSYKAPLLEEMLFGVLE 3220
MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYL PQI+PKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYH KPQE GSPRNRRIQVRRTNFRA TDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVG+PVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLV+VVVDPLRNVLYTLDLAGDVDLFDLG DGNSTTQK NNVFNIW RAARFCQGYGNGQSGLSHLTFK+PKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQ+ XXXXXXXXXXXX +FQPADGFPAKWERQPPSVYGAYCC GVTVLAQAL QGDRLVLIGSDLITRAKRKREM QEEHPSMREAVTE+GDSA QQQAMGRVWAISERPVTL DNPE GRVRALLA SGAPSPSDN XXXXXXXXXXXXXXXXXXXXXXXRAVVR GRS TSGAVVGGVVSRAKAWQRSSRYA+RPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLT LRPVDLLYDLLARNHVEGV LFF+DFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXX VAGST NPS PAA GVP HTVRARALDAALMICKPPGFSSPGQPAGGGI GGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX FVRDLEALRVPLESLRASIR VFPRAVGEDLAA A A A ADAR GAELL EAAREWRGERALGADGQLARACAALTAVGR EAVVDVCMTCAKNFG+G XXXXXXXXXVEAWEEGVYQGGGIVG QREKARLECY+RVLEAVVGLLKQEQQQ LRS AAGQGGVRG+KKVDSLIARCLSYKAPLLEEMLFGVLE
Sbjct: 1 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVEVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQK---NNVFNIWIRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALAQGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMGDSAGRQQQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXRAVVRGGRS-TSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVVLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXP-VAGSTXXXXCNPSVPAANGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FVRDLEALRVPLESLRASIRAVFPRAVGEDLAALA--RLTAAAEADARWGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQEQQQ-LRSATAAAGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLE 1067
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J909_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 5.180e-124 Identity = 324/549 (59.02%), Postives = 330/549 (60.11%), Query Frame = 2
Query: 2144 MCFSIACGLPRDLGTGSGXXXXXXXAVAGSTGGGVGNPSTPAAYGVPGHTVRARALDAALMICKPPGFSSPGQPAGGGIGIGGG--VAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRDLEALRVPLESLRASIRTVFPRAVGEDLAAQASKEAKATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADARRGAELLGEAAREWRGERALGADGQLARACAALTAVGRSEAVVDVCMTCAKNFGDGGXXXXXXXXXXXXXVEAWEEGVYQGGGIVGPVQREKARLECYERVLEAVVGLLKQEQQQQLRSVAA-----GQGGVRGTKKVDSLIARCLSYKAPLLEEMLFGVLE 3220
MCFSIACGLPRDLGTG G XXXXXX VAGSTGGG NPS P AYGVP HTVRARALDAALMICKPPGFSSPGQPAGGGIGIG VAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX FVRDLEALRVPLESLRASIR VFPRAVGEDLAA AS+EAKA AA ADARRGAELL EAAREWRGERALGADGQLARACAALTAVGR EAVVDVCMTCAKNFG+G XXXXXXXX +EAWEEGVYQGGGIVG QREKARLECY+RVLEAVVGLLKQE+QQ LRS GQGGVRG+KKVDSLIARCLSYKAPLLEEMLFGVLE
Sbjct: 1 MCFSIACGLPRDLGTGCGGXXXXXXPVAGSTGGGGYNPSVPTAYGVPNHTVRARALDAALMICKPPGFSSPGQPAGGGIGIGXXXXVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FVRDLEALRVPLESLRASIRAVFPRAVGEDLAALASREAKAAAAVPASGGLLGNXXXXXXXXXXGLVVAPGGYPTPETPQQRNQKALKREALEVHAAYRLVSRAAEAVRMAGVLARAAASSAVGGAAAVDNVPWSSLDGVPLWRLVTGGDEHRRASFLLADLVGATTKGNNNAESRRDYARELGSWCRGFFGAGDRQTFEGVELLRRAAASGXXXXXXXXRLTAAAEADARRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXGLEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQERQQ-LRSAXXXXXXXGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLE 546
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J944_9PHAE) HSP 1 Score: 276 bits (705), Expect = 2.270e-82 Identity = 181/208 (87.02%), Postives = 186/208 (89.42%), Query Frame = 2
Query: 1520 MREAVTEVGDSAAA------------QQQAMGRVWAISERPVTLTDNPETGRVRALLASSGAPSPSDNXXXXXXXXXXXXXXXXXXXXXXXX-RAVVRVGRSSTSGAVVGGVVSRAKAWQRSSRYAARPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTWLRPVDLLYDLLARNHVEGVR 2104
MREAVTE+GDSA+A QQQAMGRVWAISERPVTL DNPE GRVRALLA SGAPSPSDN XXXXXXXXXXXXXXXXXXXXXXX RAVVR GRS SGAVVGGV+SRAKAWQRSSRYA+RPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLT LRPVDLLYDLL R+HVEGVR
Sbjct: 1 MREAVTEIGDSASATDPTAGGGAGGRQQQAMGRVWAISERPVTLVDNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXSRAVVRGGRS-VSGAVVGGVLSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLVRDHVEGVR 207
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Nup133 (N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA) HSP 1 Score: 291 bits (744), Expect = 9.600e-78 Identity = 252/788 (31.98%), Postives = 348/788 (44.16%), Query Frame = 2
Query: 38 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY--HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHGKPQEAGSPRNRRIQVRRTNFRAPTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSV--AYGFWYSVFSVGNPVPSRQC---------------------SRLAHKSSSGGPGPVNSMFALLGLRRAERV---------------------LVDVVVDPLRNVLYTLDLAGDVDLFDLGGDGNSTTQKACHNNVFNIWTRAARFCQGYGNG--QSGLSHLTFKNPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLT----IVQIRCPPPEKLWQYLHQNQG-AAGAAPVPADGXXXXXXXXXXXXQVRTAIFQPADGFPAKWERQPPSVYG----------AYCCSGVTVLAQ-ALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVTEVGDSAAAQQQAMGRVWAISERPVTLTDNPETGRVRALLASSGAPSPSDNXXXXXXXXXXXXXXXXXXXXXXXXRAVVRVGRSSTSGAVVGGVVSRAKAWQRSSRYA--------ARPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTWLRPVDLLYDLL--ARNHVEGVRLFFDDFSPDQSAAMCFSIACGLPRD 2179
F L +A+ ++ +L +DE + YFC+P+T LG + +S LP L + R++ TFMGLLPE++HAW++VDN L LWNY +F+ELEQVIV V L P++GVF V+++L VAT VEV+L+AVT G + R+ VR T F A +DGV+M I HP GR+FMAGKDGNLYEL Y A G W S +G SR+C SR A ++ PGP+ + ++R RV L+D+ VDPLRN LYT+D G + ++LG DG T ++W + +FC+ + Q F+ + V+L VV A E V LV V SGMR+YL + + T ++ +R PPP LW++ AAGAAP QP GF A R AY VTV+AQ A +G G L+ + + S+ E E+ + G V AI E P L D P + AL +SG PS + + R + A V +R++ R A A V P PPL P G+ GGL R G+V L EL Q + +R LLCL+GAGL ++ LRP+D+L+ LL A + ++LFFD + ++ AMCF+IACGLP D
Sbjct: 15 FSALADAHGEVVSHLLQDEAQNTTLYSQLLDNPGGAAHGYFCEPHTADQLGLPLELRSTIPLPAELLDLQQRMQVATFMGLLPELNHAWLSVDNALLLWNYVDGADVVKKFQELEQVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVTDGG---------DGRLDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEAGGATG-WLSYVGLGGSSGSRKCRKINRSTTPSSAVWNSFKQGRSRAARGAAITSPGPMAGLL----VKRLPRVTAARAXXXXXXXXXXXAGAASLLDLAVDPLRNALYTVDSTGVLRHYNLGPDGQQTVPVG---GDLDLWAASGQFCRLHSTNRAQDVPDARAFEPGHGLEAVALSVVDACEDACVHLVVVASSGMRVYLGPSGRASEIDTAQATSPLRVLHVRAPPPAALWEHRKALANPAAGAAPPS----------------------QPPTGFAAGATRXXXXXXXXXXXXXXXXXAYYAHRVTVVAQRAAGRGXXXXXXGLGLVAICESGVARLDQPQVSLAETALEIDPA--------GGVLAIEEHPTVLGD-PAMASLLALTYTSGTPSAHNE--------------------------IARQLAEANEDAPVAPPSARSQRAAHPPRAADGDPNAPPAGEVPPPPPLCLPP---RGWLGGL--RGARGVVPLRELATQHAAPQRRLLCLSGAGLHMVAKLRPLDVLHRLLRAAPPRPDLLQLFFDSYGHAEACAMCFAIACGLPND 723
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA) HSP 1 Score: 268 bits (686), Expect = 5.750e-71 Identity = 249/841 (29.61%), Postives = 375/841 (44.59%), Query Frame = 2
Query: 158 FCDPYTNSYLGPQIRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ------DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHGKPQEAG---SPR--NRRIQVRRTNFRAPTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGNPVPSRQCSRLAHKSSSGGPGPVNSMFA--LLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGGDGNSTTQKACHNNVFNIWTRAARFCQGYGNG-QSGLSHLTFKNPKQ-----HQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSS----------GGKRHNFRLTIVQIRCPPPEKLWQYLHQNQGAAGAAPVPADGXXXXXXXXXXXXQVRTAIFQPADGFPAKWERQPPS--VYGAYCCSGVTVLAQA-LTQGDRLVLIGSDLITRAKRKREMHQEEHPSMRE--AVTEVGDSAAAQQQAMGRVWAISERPVTLTDNPETGRVRALLASSGAPSPSDNXXXXXXXXXXXXXXXXXXXXXXXXRAVVRVGRSSTSGAVVGGVVSRAKAWQRSSRYAARPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTWLRPVDLLYDLLARNHVEGVRLFFDDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXXAVAGSTGGGVGNPSTPA--AYGVPGHT-------VRARALDAALMICKPPGFSSPGQPAGGGIGIGGGVAA-----------TAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVV 2518
F +PY +++ G + + +P AL+ + ++CM+FMGLLPEI AW+++DN L+LWNY DF +F L+Q+IV+VALVPP+ GVF ++V+++LAVAT VE++LLAV + +P+ G P N + +R T+F +D V+M+K+ +GR+FM G DG+LYE Y+ F + +G + R+C +L H +S P++S+ L L + LVDVVVD +R +LY L ++ +DLG +G+ + +C+ + + + G F + K +IVS+ VVP TE+ V LV V+++G R Y+S S + L++V +R PPP +V +A +P +G+P ++ Q S V+ AY C G V A+ + D + + D T + + S R A+ E S AA Q +VWA+ E + D V +AS P + SS SG+ +R + R A P AP L + S G N ++V V + E+ +Q + RR L L+ G+ RP+D LYDL++R+ + G+ FF F +QS AMCFSIACGLP DL A A S N S A A PG + VR RA+ A + P S P G G VA TA + +F+ S H GL L R+LRP WF P+++
Sbjct: 11 FPEPYQSTW-GGAVHYEGVTAVPPALTEQYRSLKCMSFMGLLPEISCAWLSIDNKLFLWNYERARYQTDADFLEFDGLDQIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAFE-EPEGTGVLGQPLGLNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGGSDGSLYEALYANEEEFALGL-GLGFGMAGRKCRKLNHSAS-----PLSSLVPGFLKQLSAPSKPLVDVVVDDVRQILYALREDNSLEGYDLGVNGDLLKPFGTR---IQLRREVKHWCERHTSSYRPGPDSRLFDSTKPTSGALDKIVSMNVVPLTEANNVHLVLVSNAGFRFYVSTVSRYHSSXXXXXXXXAKRPTTLSVVHVRAPPP----------------------------------VEVGSARGEPMEGYPPRYSPQTSSRSVHSAYYCHGCLVTAEGGADEADTVRVSQPDFCTEREVAAGLSHWSVTSGRANAALQEATQSIAASQ----KVWALDEVAPLVNDISRAHLVALAMASRTPALPE-------------------------LPTFLNPTSSSGSGSRSLPTSTRPRLSLRGPIARAAPPAPPLSLAYADRDSGAGIGPANQKEV---VPMNEMAMQLWLPRRTFLGLSNVGIHRFLKRRPIDYLYDLVSRDDIRGIGTFFQLFGKEQSCAMCFSIACGLPTDL---------VEAASAASVAFPTQNDSALALAAAASPGPSLNPTVERVRERAVLVAQQLGGNPSISPPLSSGGEATSTGMSVATPGTPGTPRHQPTAANTVFTPEFSYSDQHEGLVLLATRILRPLWFKPIIL 765
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K2_9STRA) HSP 1 Score: 254 bits (650), Expect = 7.590e-66 Identity = 247/881 (28.04%), Postives = 367/881 (41.66%), Query Frame = 2
Query: 38 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRE------------------LEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHGKPQEAGSPRNRRIQVRRTNFRAPTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGNPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGGDGNSTTQKACHNNVFNIWTRAARFCQGYGNGQSGLSHLTFKNPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFR---------------LTIVQIRCPPPEKLWQYLHQNQGAAGAAPVPADGXXXXXXXXXXXXQVRTAIFQPADGFPAKWERQPPSVYGAYCCSGVTVLAQALTQG-DRLVLIGSDLITRAKRKREMHQE-EHPSMREAVTEVGDSAAAQQQAMGRVWAISERPVTLTDNPETGRVRALLASSGAPSPSDNXXXXXXXXXXXXXXXXXXXXXXXXRAVVRVGRSSTSGAVVGGVVSRAKAWQRSSRYAARPV-----APSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTWLRPVDLLYDLLARNHVEGV-----RLFFDDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXXAVAGSTGGGVGNPSTPAAYGVPGHTVRARALDAALMICKPPGFSSPGQPAGGGIGIGGGVAATAGGVIMGE----------KFTNSALHNGLQLFIGRLLRPFWFLPVV 2515
F +L A+ L LR DE + ++ Q + S Y+ +PY + GP + SF LP+ + + ++EC +FMG LPE+ W+TVDN L+LW Y + T F + +VIV+VAL PK GVF V++VL VA+ VEV+LLAVT E G+ ++ T + P+D V+M+K+ +GR+FMAG DGN+YEL YS + W ++ G +C ++ H + + + F L E LVD+ VD +R V+Y + G + F LG G TT NV + + G ++SL V+P TESK V +VAV +G+RIYLS ++ N+ + + +R PP + + G +A P DG + P+ Q V A GVT+LA Q D LV + DL+ RA + +HPSMRE V D + G+++AI E + P+ R+RA+ A S P S RAV + G+ + +V + +S+ A V A + + A P G+ LN + G + L S +R+ L LT G+ L LRP D+LY LA HV + R FF F +++AMC ++ACGLP D G G + S A P T++ RA+ L + + P + + +G G AA A +M + +F S+ H L L R+LRP W VV
Sbjct: 3 FKILEKASETLQDKLRLDESALDIADQFSFRPDMHGSHRYYTEPYKTQW-GPLLEYGSFTALPKRILDQYTKIECASFMGTLPELGRVWVTVDNKLFLWKYTSAPSTSFPNEVAEDVDAISEDCEVYDGISEVIVSVALSAPKPGVFLDTVKYVLVVASPVEVVLLAVTC----DEQGN----NFKLVPTAYTMPSDNVAMVKVVGSQSGRIFMAGNDGNVYELDYSNSESVWSALVDAGGEHSRHKCRKINHFAWNWRLVHILPPF-LKSFAGEEDSLVDLAVDNVRQVVYAITAKGVLSAFYLGSTGTETTLFLSSFNVLDAARTHLTVSRSLPEGSPKPESFANTTAPGFNVLSLHVLPLTESKKVHVVAVLGNGIRIYLSLLTANRGLFNYMPGPQQQSGNYSVPGGVEVAYVRSPPSPAALRVCSNSSGRLSSASAP-DGIQSAGGAGAGAELENGSA-------PSYMPSQALKVSSALYSQGVTMLALDKQQHPDELVCLFEDLVGRAHLTLGLPPAYQHPSMREGVCIGLDETTSG----GKIYAIKENCAQI-HFPDVARLRAMFAHSSTPPNSS-----------IRDASHHFDTSLESRAVAAGAHQAGGGSGLSWLVGQDGDNTQSAVTPASEVPVVFGADALAMAAKPAGTGFDTFDLNQVALLGEMSWQHLPCSSVSLQRQFLVLTNQGIHTLRKLRPADVLYRHLA--HVNSLADDQCRFFFSSFGALEASAMCVALACGLPCDAG------------------GSANSLSQAAVIRRPLETIQMRAMSVMLGMTQGPTYKT----------LGSGPAAAA--TVMQDSRLVLRDSSVEFVRSSAHEALYLVASRILRPLWLRSVV 817
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Nucleoporin, (putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDY8_ACACA) HSP 1 Score: 208 bits (529), Expect = 4.750e-51 Identity = 152/491 (30.96%), Postives = 234/491 (47.66%), Query Frame = 2
Query: 191 PQIRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHGKPQEAGSPRNRRIQVRRTNFRAPTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGNPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGGDGNSTTQKACHNNVFNIWTRAARFCQGYGNGQSGLSHLTFKNPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGG------KRHNFRLTIVQIRCPPPEKLWQYLHQNQGAAGAAPV-PADGXXXXXXXXXXXXQVRTAIFQPADGFPAKWERQ---PPSVYGAYCCSGVTVLAQALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVTEVGD---------SAAAQQQAMGRVWAISERP 1606
PQ R LPE L + +EC F+GL PEI+ AW+TVDN L LWNY ++++ + + +Q+IV+V L+PPK+ VF+++V++VL +AT VE++LLAV + E +P+ I + T D V+M+KI GR+FM G DG+LYEL Y G W+S ++ ++ H M AL A+ ++D+V+D RN+LYTL G ++++DLG DG A +NV A C Q G K+ + S+ V+P +ESK + LVA+T S +R+Y S S G + +L ++ IR PP + +Y + PV PA + A +P GF RQ P ++ Y GV +L Q++ + D +V I + ++ PS T+ GD A + + G++WAI E+P
Sbjct: 86 PQFRLLKMIPLPETLHQMYKSIECKCFLGLFPEINRAWITVDNQLCLWNYESKEYAIWTDQDQIIVSVGLIPPKRDVFSEDVKYVLVLATPVEIVLLAVWF-----EDNTPQGE-IHLEPTRIALSADNVNMVKIVGTKRGRIFMGGSDGSLYELEYQADEG-WFS----------KRARKINHTRGI--------MSALTSYWSAKPAIIDIVIDESRNILYTLSARGAIEVYDLGTDGLGFQHVAAMSNVI---ASAETLCPRLKFTQIG---------KEASVKSIAVIPKSESKYLTLVAITSSALRLYFSALSLSGDAAAIPSQRPTKLELIHIRFPP-DLTHEYTKVTEAGGPLTPVRPA--------AYEAAARTPRAAGRPF-GFDVAARRQAGPPYNIDTTYYSQGVVLLGQSVGERDEVVAIKQTI------------DQQPS----ATQTGDLIISRPLLLEKATKTEVAGKIWAIDEKP 513
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Nuclear (pore complex protein Nup155 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP24_NANGC) HSP 1 Score: 182 bits (462), Expect = 1.960e-44 Identity = 134/414 (32.37%), Postives = 204/414 (49.28%), Query Frame = 2
Query: 50 RNANTVLLHNLRRDELSPELQKQLTAT---GMASTSQAYFCDPYTNSYLGPQIRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ-DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHGKPQEAGSPRNRRIQVRRTNFRAPTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGNPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAE-RVLVDVVVDPLRNVLYTLDLAGDVDLFDLGGDGNSTTQKACHNNVFNIWTRAARFCQGYGNGQSGLSHLTFKNPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYL-SCGSS---GGKRHNFR---LTIVQIRCPPPEKLWQYLHQNQGAAGAA 1255
R A + R E PE + A+ G S ++ P+ + GP + +S P A+ R ++ M+F GL EI AW+TVDN+LY+W+YHT+ +L+Q+IV V LV P VF V H+L T V L A+ + E G+P + +QVRRTNFR TDGV M K+ GR+F+AG+DG++YE+ YS ++ S +C +L S GP + L L + +VD+VVDP R++LY+L + ++DLG ++ T +VF T A R+ + G+ F +++SL V+ +ES T L+AV+++G R Y +C + G K R L +V +R PP +W+ L + G G A
Sbjct: 42 RQAVLATIEEKMRKEGKPEDSRMNYASMSGGGVSGDMPFYIHPWKDPAFGPPVEYQSLRPFPPAILRTYSLLQAMSFQGLWTEIHRAWITVDNLLYIWDYHTEASHAIVDDLDQLIVAVGLVRPNPEVFKDTVTHLLVACTPSAVELFALCF-----EDGTPDSA-LQVRRTNFRVSTDGVVMRKVVGTRTGRIFLAGQDGSVYEIQYSNEKDLYF--------YSSNKCRKLNRTS---GPASLAVSAVLRHLWKTNVSEIVDLVVDPTRSILYSLSADNLIQVYDLGEKDDACTSLGIKEDVF---TMALRYFKHRHRGEQ----QRFTKGHPFRLLSLHVLSCSESATKHLLAVSNAGHRFYFETCPKTPYIGSKLFAPRPSTLALVDVRLPPKPSVWEAL-RGHGEPGQA 430
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Nucleoporin_N (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X038_GLOUD) HSP 1 Score: 171 bits (433), Expect = 2.080e-42 Identity = 123/384 (32.03%), Postives = 182/384 (47.40%), Query Frame = 2
Query: 83 RRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVAL-VPPKKGVFNKEVEHVLAVATTVEVILLAVTYHGKPQEAGSPRNRRIQVRRTNFRAPTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGNPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGGDGNSTTQKACHNNVFNIWTRAARFCQGYGNGQSGLSHLTFKNPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGG---------KRHNFRLTIVQIRCPPP 1204
R D P+L QL S Q YF +PY + ++ + LP ++ + + +T GLL ID+AW +VD L+LWNY + E +Q +V V + + P GVF +V+HVL VATTVEV+L+AV Y + G+ ++++RT TD + +I NGR+F G DG++YE Y + S P ++ C ++AH S+ P L+GL + +++ D R +LY+L G + LFD G G T + C N+ + AR + S F+N QIVSL V+P ES V LVAV + +R Y++ S + RL IV IR PPP
Sbjct: 32 REDAQYPDLYDQLANQ---SEPQNYFFEPYATQWCPQLVKKGNVIPLPGVIATSLEDTKSITLSGLLHAIDYAWTSVDTRLFLWNYKARGKFAVFEFDQAVVAVGICMKPAPGVFTDKVQHVLVVATTVEVLLVAVLYENNDPQGGA-----VKLQRTKLSVSTDNCVVRRIVTTRNGRIFFGGSDGSVYEFLYGPD-----AESSSAIPFFNKPCKKIAHTSTYAAYLP----SFLMGLTSSPGKILEFANDEERQILYSLHENGHITLFDQGVSGEDT-KVVCSLNLLEAGAKYAR--ENRRTRVSCPDERLFQNTNM-QIVSLAVIPREESAFVNLVAVASNAIRFYITVYSRRTYTVGNAIPRTKRPSRLEIVYIRLPPP 394
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2I9_9STRA) HSP 1 Score: 169 bits (427), Expect = 5.700e-42 Identity = 123/337 (36.50%), Postives = 173/337 (51.34%), Query Frame = 2
Query: 140 STSQAYFCDPYTNSYL-GPQIR-PKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY-HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHGKPQEAGSPRNRRIQVRRTNFRAPTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGNPVPSRQCSRLAHKSSSGGPGPVNSMFALLG--LRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGGDGNSTTQKACHNNVFNIWTRAARFCQGYGNGQSGLSHLTFKNPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLS 1135
STS+ Y+ PY + PQ+ P LP AL+R+ V MGLLPEI A++T DN LYLW++ H +DFT + L+QVI++V LV P V +E++L VATTVEV+LL V++ E + R+ + PTD VSML +A GR+FMAG DG LYELTY G W + +C + H ++ G AL+G L + L+ V VD RN++YTL G ++L+DLG DG + RA G+ G+ H K V++ V+ TES+ + LVAV+D G R+Y +
Sbjct: 52 STSRNYWASPYLRGGVWAPQVVIPSDMHPLPAALARKHAEVHAT--MGLLPEISRAYVTFDNKLYLWHFDHAEDFTAYERLDQVILSVGLVMPTP-VVQGYIEYLLVVATTVEVVLLGVSF-----EREDDPHSRMTLTPLRLTFPTDNVSMLAVAGTSAGRIFMAGGDGCLYELTYEDDRGGWRDMLGWSRGA---KCRKFNHTTTHIG----RVARALVGSLLANPGQPLIAVEVDHYRNLMYTLAQDGTIELYDLGEDGADLVR------------RATVTLADMQTGERGVGH------KLRPPVAIAVITPTESERLHLVAVSDLGARLYFT 355 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig843.16564.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig843.16564.1 >prot_E_fasciculatus_S2_contig843.16564.1 ID=prot_E_fasciculatus_S2_contig843.16564.1|Name=mRNA_E_fasciculatus_S2_contig843.16564.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1072bp MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAback to top mRNA from alignment at E_fasciculatus_S2_contig843:16434..26002+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig843.16564.1 ID=mRNA_E_fasciculatus_S2_contig843.16564.1|Name=mRNA_E_fasciculatus_S2_contig843.16564.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=9569bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig843:16434..26002+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig843:16434..26002+ >mRNA_E_fasciculatus_S2_contig843.16564.1 ID=mRNA_E_fasciculatus_S2_contig843.16564.1|Name=mRNA_E_fasciculatus_S2_contig843.16564.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3216bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig843:16434..26002+ (Ectocarpus fasciculatus EfasUO2)back to top |