mRNA_E_fasciculatus_S2_contig8429.16561.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8429.16561.1
Unique NamemRNA_E_fasciculatus_S2_contig8429.16561.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: PHB (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 1.650e-180
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1
Query:    1 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 795
            NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV
Sbjct:   71 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 335          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: PHB (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 4.470e-163
Identity = 239/265 (90.19%), Postives = 253/265 (95.47%), Query Frame = 1
Query:    1 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 795
            NMA CFQC+ N+E+GV+ERLGK+ GLA PG  CI+WP+D IVAK+STRVQQLDVRMETKTKDNVFVTAVVSVQYQPIK KIYDAFYRLTDP+AQIRSYV+DVVRSTLPKLDLDQAFDSKEDIA+AVKNQLEEVM+EYGYQILQALVTDMDPD RVK AMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQ F+E IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV
Sbjct:  112 NMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 376          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Flagellar (associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 2.800e-134
Identity = 193/262 (73.66%), Postives = 230/262 (87.79%), Query Frame = 1
Query:   10 CCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 795
            CC  C+  +E+GV+ER G+++ LA+PG + + WPL  +V  +STRVQQLDV+ ETKT DNVF+T  V VQYQ +  K+YDAFYRLTDPK+QIRSYVYDV+RST+PKL+LDQAF +KE++A AVK QL  VMQEYGYQILQALVTD++PD RVK AMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQR+AIV GLRDS+  FS +I+GT+PKDVMDLLLLTQYFDMLRD+GQS++++T+FLPHAP+SV
Sbjct:    6 CCCICVQTSEVGVVERFGQFEKLAKPGLSLVFWPLSQVVGTISTRVQQLDVQAETKTSDNVFITVNVCVQYQVLYDKVYDAFYRLTDPKSQIRSYVYDVIRSTMPKLELDQAFAAKEEVAHAVKEQLTVVMQEYGYQILQALVTDLEPDRRVKDAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRQAIVAGLRDSIHDFSSSIEGTTPKDVMDLLLLTQYFDMLRDIGQSTKSSTIFLPHAPESV 267          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S5L6_9STRA)

HSP 1 Score: 330 bits (847), Expect = 4.160e-111
Identity = 167/266 (62.78%), Postives = 212/266 (79.70%), Query Frame = 1
Query:    1 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQS-SRAATVFLPHAPQSV 795
            N   C  C+    + ++ER GK+Q +  PG  C++WP+DSIV ++S RV+QLDV  ETKTKDNVFV  V+SVQYQ +  K +DAFY+L +P+ QI++YV+DVVRS LPK++LD++F +KE +A  VK+ L+E M  +GY I++ALVTD+ PDARVK +MNEINAS+RLREAA  KAEADKI+QVKAAEA+AESKYLSGVGV+RQR+AIV GL+DS+  FS  I GT+PKDVMDLLLLTQYFDML+DVG S S   T+FLPHAP +V
Sbjct:    4 NQCFCLACVRTNTVALVERCGKFQAIKGPGCQCLVWPVDSIVGRVSLRVRQLDVNCETKTKDNVFVNVVISVQYQVVLEKAFDAFYKLANPEIQIQAYVFDVVRSELPKMELDESFSNKEQLANEVKHHLDETMMSFGYSIIKALVTDISPDARVKMSMNEINASRRLREAAKEKAEADKIVQVKAAEADAESKYLSGVGVARQRQAIVGGLQDSIIEFSGEIAGTTPKDVMDLLLLTQYFDMLKDVGSSGSGGKTLFLPHAPSAV 269          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9W2_9STRA)

HSP 1 Score: 328 bits (841), Expect = 2.860e-110
Identity = 163/260 (62.69%), Postives = 209/260 (80.38%), Query Frame = 1
Query:   13 CFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQS 792
            CF  +  AE+GV+ER GK+  L QPG  C++ P++ +V +LS RVQQLDVR+ETKT DNVF+TAVVSVQYQ ++ K+YDAFY LT+P  QI ++VYDVVRS LP L+LD  F++KE++A+AVKN L E M  YGYQILQ L+TD+DPD RVK AMNEIN+SKRL+ A   +AE DKI+QVKAAEAE+E+KYLSGVGV++QRKAIVDGL++S+  FS+ ++G+S K VMDLLLLTQYFDM+RDVG ++   T F+P +  S
Sbjct:    5 CFFTVSTAEVGVVERFGKFSRLVQPGLNCVVCPVEVLVGRLSFRVQQLDVRVETKTLDNVFITAVVSVQYQILREKVYDAFYALTNPTQQITAHVYDVVRSELPLLELDAVFEAKEELALAVKNALSETMGAYGYQILQTLITDLDPDNRVKAAMNEINSSKRLKFAVAERAEGDKILQVKAAEAESEAKYLSGVGVAKQRKAIVDGLKNSIVDFSQEVEGSSTKQVMDLLLLTQYFDMVRDVGAANHCRTTFVPSSKSS 264          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRL8_9STRA)

HSP 1 Score: 328 bits (840), Expect = 4.660e-110
Identity = 167/256 (65.23%), Postives = 204/256 (79.69%), Query Frame = 1
Query:   10 CCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 777
            CC QCI  +EIG++ERLGKY  L   G      P++ +  K+S RVQ LDVR ETKT+DNVFV   VSVQYQ  K KIYDAFYRL++P  QIR+YV+D+VRS LP + LD+AF++KE +A+ VK  L  VM EYG+ I+QALVTD+ PDA+VK AMNEINASKR++EAA+ KAEADK++ VKAAEA+AESKYLSGVGV+RQRKAIVDGLRDS++ FS  + GT+PKDV+DLLLLTQYFDML++VG     ATVFLP
Sbjct:    6 CCVQCIQTSEIGIVERLGKYDRLQNAGINFFCCPIEYLAGKVSLRVQALDVRCETKTEDNVFVEVNVSVQYQVQKDKIYDAFYRLSNPTQQIRAYVFDIVRSVLPAMPLDEAFEAKEHVALEVKKALSAVMDEYGFVIVQALVTDIAPDAKVKNAMNEINASKRMKEAASEKAEADKVLLVKAAEADAESKYLSGVGVARQRKAIVDGLRDSIKQFSGNVQGTTPKDVIDLLLLTQYFDMLKEVGNHEYTATVFLP 261          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFY3_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.760e-109
Identity = 165/265 (62.26%), Postives = 210/265 (79.25%), Query Frame = 1
Query:    1 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSV 795
            N  CCF+ +   +IGV+E LG+Y  +  PG TCI WP+ ++V  LS R+QQLDV  ETKTKDNVFV   V+VQY+ I  K YDA+YRL+DP+ Q+RSYV+DVVRST+P+++LD+AF SKEDIA +V  QL  VM +YGY+I+++LVTD+ PDARVK +MNEINAS+RL+EAA +KAEADK+ Q+KAAEAEAESKYLSG+GV+RQRKAIV+GL+DSV  FSE ++G SPKDVMD+LLL+QYFD L  VG +S    + L H P  V
Sbjct:    4 NGCCCFRYVRTQQIGVVETLGQYTKMIAPGCTCIFWPIANVVGTLSLRIQQLDVYCETKTKDNVFVQVAVAVQYRVISEKAYDAYYRLSDPREQVRSYVFDVVRSTVPRMELDEAFASKEDIANSVMEQLTTVMSDYGYEIMESLVTDLSPDARVKASMNEINASRRLKEAAQHKAEADKVKQIKAAEAEAESKYLSGLGVARQRKAIVNGLQDSVGAFSEEVEGASPKDVMDILLLSQYFDTLSAVGANS----LILEHDPAVV 264          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Predicted (protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXB1_PHATC)

HSP 1 Score: 324 bits (830), Expect = 1.250e-108
Identity = 164/256 (64.06%), Postives = 206/256 (80.47%), Query Frame = 1
Query:   10 CCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 777
            CCF  I  AE+GVIER GKY  L QPG   I  P++S+V KLS RVQQL+VR+ETKT DNVF+T+VVSVQYQ ++ K+Y+AFY L++P  QI ++VYDV+RS LP L+LD  F++KED+A+AVKN L E+M  YGYQI+Q L+TD+DPD RVK AMNEIN+SKRL+ A   +AE DKI++VK AEAEAE+KYLSGVGV++QRKAIVDGLR S+  FS+ ++G+S K+VMDLLLLTQYFDM+RDVG  S   T F+P
Sbjct:    4 CCFT-ISTAEVGVIERWGKYSRLVQPGLNVICCPMESLVGKLSFRVQQLNVRVETKTLDNVFITSVVSVQYQVLRDKVYEAFYALSNPARQITAHVYDVMRSQLPTLELDAVFEAKEDLALAVKNALSEIMTTYGYQIVQTLITDLDPDQRVKNAMNEINSSKRLKYAVAERAEGDKILKVKGAEAEAEAKYLSGVGVAKQRKAIVDGLRTSIVDFSDHVEGSSTKEVMDLLLLTQYFDMIRDVGAESHCKTTFVP 258          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NF76_9STRA)

HSP 1 Score: 322 bits (825), Expect = 7.210e-108
Identity = 160/255 (62.75%), Postives = 202/255 (79.22%), Query Frame = 1
Query:   13 CFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 777
            CF  I  +E+G+IER GKY  LA PG  C+  P D +V ++S RVQQ+DVR+ETKT DNVF+TA VSVQYQ ++ K+++AFY LT+   QI S++YDV+R+ LP L+LD  F++KED+A+AVKN L E M  YGYQILQAL+TD+DPD RVK AMNEIN+SKRL+ A   +AE DKI++VK+AEAEAE+KYLSGVGV++QRKAIVDGLR S+  FS+ + GTS KD+MDLLLLTQYFD +RDVGQ S   T F+P
Sbjct:    5 CFFTISTSEVGIIERFGKYSRLAHPGLGCVACPADVLVGRMSFRVQQIDVRVETKTLDNVFITATVSVQYQVLREKVFEAFYALTNAHQQITSHIYDVMRAQLPTLELDAVFEAKEDLALAVKNALSETMSLYGYQILQALITDLDPDQRVKNAMNEINSSKRLKFAVAERAEGDKILKVKSAEAEAEAKYLSGVGVAKQRKAIVDGLRTSIVDFSDGVKGTSSKDIMDLLLLTQYFDCIRDVGQESHCKTTFVP 259          
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C293_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.250e-107
Identity = 164/256 (64.06%), Postives = 201/256 (78.52%), Query Frame = 1
Query:   10 CCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 777
            CCF  I  AE+G+IER GKY  LAQPG  CI+ P + +V KLS RVQQLDV++ETKT DNVF+ AVVSVQYQ ++  ++DAFY LT+P  QI +++YDV+RS LP L+LD  F++KED+A+AVKN L EVM  YGYQILQAL+TD+DPD RVK AMNEIN+SKRL+ A   KAE DKI+ VK AEAEAESKYLSGVGV++QRKAI+DG+R S+  FSE + GTS KD+MDLLLLTQYFD ++ VG      T F+P
Sbjct:   42 CCFT-ISTAEVGIIERCGKYNRLAQPGLGCIVCPYEQLVGKLSFRVQQLDVKVETKTLDNVFIVAVVSVQYQILRDSVFDAFYALTNPAQQITAHIYDVMRSQLPTLELDAVFEAKEDLALAVKNALTEVMSSYGYQILQALITDLDPDQRVKNAMNEINSSKRLKYAIAEKAEGDKILLVKGAEAEAESKYLSGVGVAKQRKAIIDGMRTSIAGFSEGVQGTSHKDIMDLLLLTQYFDTIQSVGGRKHCKTTFVP 296          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8429.16561.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PHB1.650e-180100.00domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
PHB4.470e-16390.19domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Flagellar2.800e-13473.66associated protein n=1 Tax=Tribonema minus TaxID=3... [more]
Hypothetical4.160e-11162.78protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical2.860e-11062.69protein n=1 Tax=Grammatophora oceanica TaxID=21045... [more]
Hypothetical4.660e-11065.23protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.760e-10962.26protein n=1 Tax=Leptocylindrus danicus TaxID=16351... [more]
Predicted1.250e-10864.06protein n=3 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Hypothetical7.210e-10862.75protein n=2 Tax=Odontella aurita TaxID=265563 RepI... [more]
Hypothetical1.250e-10764.06protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8429contigE_fasciculatus_S2_contig8429:563..6000 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score506.9
Seed ortholog evalue5.6e-141
Seed eggNOG ortholog2880.D8LDT0
Preferred nameHIR1
Model size797
KEGG koko:K03129
KEGG Pathwayko03022,ko05016,ko05168,map03022,map05016,map05168
Hectar predicted targeting categoryother localisation
GOsGO:0002239,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005911,GO:0008150,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0012505,GO:0016020,GO:0019899,GO:0019900,GO:0019901,GO:0030054,GO:0031090,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043424,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051704,GO:0051707,GO:0055044,GO:0071944,GO:0098588,GO:0098805
Exons8
EggNOG free text desc.stress-induced mitochondrial fusion
EggNOG OGsCOG0330@1,KOG2620@2759
Cds size792
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8429.16561.1prot_E_fasciculatus_S2_contig8429.16561.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8429 566..6000 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842501.997013-UTR-E_fasciculatus_S2_contig8429:562..5651696842501.997013-UTR-E_fasciculatus_S2_contig8429:562..565Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8429 563..565 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842502.0178-CDS-E_fasciculatus_S2_contig8429:565..6821696842502.0178-CDS-E_fasciculatus_S2_contig8429:565..682Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8429 566..682 +
1696842502.0301447-CDS-E_fasciculatus_S2_contig8429:1095..11521696842502.0301447-CDS-E_fasciculatus_S2_contig8429:1095..1152Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8429 1096..1152 +
1696842502.0409317-CDS-E_fasciculatus_S2_contig8429:1866..19291696842502.0409317-CDS-E_fasciculatus_S2_contig8429:1866..1929Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8429 1867..1929 +
1696842502.0521164-CDS-E_fasciculatus_S2_contig8429:2514..25871696842502.0521164-CDS-E_fasciculatus_S2_contig8429:2514..2587Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8429 2515..2587 +
1696842502.0616312-CDS-E_fasciculatus_S2_contig8429:3335..33821696842502.0616312-CDS-E_fasciculatus_S2_contig8429:3335..3382Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8429 3336..3382 +
1696842502.073405-CDS-E_fasciculatus_S2_contig8429:4186..43751696842502.073405-CDS-E_fasciculatus_S2_contig8429:4186..4375Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8429 4187..4375 +
1696842502.091181-CDS-E_fasciculatus_S2_contig8429:5117..52411696842502.091181-CDS-E_fasciculatus_S2_contig8429:5117..5241Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8429 5118..5241 +
1696842502.1004715-CDS-E_fasciculatus_S2_contig8429:5878..60001696842502.1004715-CDS-E_fasciculatus_S2_contig8429:5878..6000Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8429 5879..6000 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8429.16561.1

>prot_E_fasciculatus_S2_contig8429.16561.1 ID=prot_E_fasciculatus_S2_contig8429.16561.1|Name=mRNA_E_fasciculatus_S2_contig8429.16561.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=264bp
MACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQ
LDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYD
VVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDP
DARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGV
SRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSS
RAATVFLPHAPQSV
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mRNA from alignment at E_fasciculatus_S2_contig8429:563..6000+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8429.16561.1 ID=mRNA_E_fasciculatus_S2_contig8429.16561.1|Name=mRNA_E_fasciculatus_S2_contig8429.16561.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5438bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8429:563..6000+ (Ectocarpus fasciculatus EfasUO2)
AACATGGCCTGCTGCTTCCAATGCATCCCCAACGCGGAGATCGGCGTGAT CGAGAGGCTCGGAAAGTACCAGGGCCTCGCCCAGCCGGGTTTCACCTGCA TCATGTGGCCGCTCGACAGCGTGAGTGATGACTGGTTGATGCGTTTGTCA TCTTTCGGGTCTGGGGGCTATAAGACGTGCCAGGAATGGCAACTGATCCA TGTCCATGAGGACTCTGGTTCCACAGGGCGGGGGGAGGTTGTTTCACATG ACAGTCCCGCCATGTCGCTGCCGGTCGCCGACACAACCACAGGGCGAGAA TATCGATGTGGCATGTGGAGGTGCGCACCGTGCATTGTACAGCATCAATC CCCGAGTCGACGGTAATTTTACAGTACTTCTACGACATCAATGTCGGTGT AAGCTCAGCCTACATGCCAGGTACATGCCTTGTTCCTTTTGCAGCTTTGA TTAAGGTATCGTCGGTGTTTTTGCTTGCGATGTGCTGTTGTTGTTGTTGC TGCTGCTGCTGCTGCTGCTGTGTGTCTTCGCAGATCGTGGCCAAGCTTTC CACGCGTGTGCAGCAGCTTGACGTCCGCATGGAGACCAAGGTGAGCGTGA GCATACATGTCCCGCCCGTCCTCCCACTCTCCCCCCCTCCCCTCTCCCGC GGCCTGCTCCTCAGACACTCCTCAAGCTGTCACGCGTGCCCATGGCCAGT AGGTGTCGTTGTCGTCGTCGTCCGCCCTGAAAACCATGTTTGTTTTTTTT TCCTTTTATAATCCTGCTGCCTGCCATCATCGTTGCGTTTTTGCTCGTGG GAGGGAGCAGTCGTAGGGCGTGGTATGCATATATATATATGTATGGCCGA ACATCAACTCAAAGCGGGACGATTGTCAGGTACCGCCTTGGCGGTAAATG AAGTATTACAAGGAAAAATAACAGGAAGGGGATACGCAGACTCTGTCCCC TAAAACCCTAACCCAACTTGCCCGATTGCATCTATGCTTTATCCAACACA TTCCCTGGATACAATACAAAAACCCTGCGAAGGCTACTGATTGTCAGCTG CAGCAGCAACGCCGCCTCGTACGGGGGTAAGAAAACAAAGACTAAATAAG ACTACCACGACGCTCTGCTGCTGTGCGCACGATGCTCAATCCCCCTTCTC TAGCCCTCCCTCCCTCCCTCCCTCCCTCCCCTTTTCGGGCGTTGTTTCGA TGAATCAAATCATTGTGTCCGTTGTTTTGATCCCTCGTTTCTCCCACCTT TTTTGTTTTGTCGTCGCCGTGTTATCTCATCATGGGGTGCGGTGCTGCCA CCAGACGAAGGACAACGTGTTCGTCACGGCCGTCGTGTCCGTCCAGTACC AGCCCATCAAGTCAAAGGTTAGTGAAGCATGTGTCCTTGCGGTTTTTTGC TTGTTGTGTCGTCCTACGGTACAAGAAGGTTCCGTCCCTTGTCCCGCCAC AATGGCAAAGGGTGACTCGTGTTTCTTTTTCTCCTATCTGTCTCAATTTT CAGTTGTAAATTGTCTCGCGAGGGTGTGTGTTTTGGTTCTGAAGGCCAGA GATAAGGGTGCCGTGTGGCAGCTGAAGATCCGGCGCCGCCCTTCCCACCG CACGGCCTTGTGCTCAACGCTCTTGGGATGCACGCACGTCACGGTGCCCC CCTGTCGCCGCCGTTTGTAAGTAATTTATCACGGTGTGATCAGGTGTAAC CGTACTCCCCGAACGTTTACCCTGACTGTGCTTTCGCGCCACGTGTGTCG TGTGTCCTGACTTCGCTTTTGTTGCGCATCCTCTTGGCGTTTCTGCGACT TCGAAACGACACGTTGACACGACACGTCGAAACGACACGTCGAAATGACA CGTCGAATCGAAACATTGAATCGAAACGTCGAAACGATACGTCGAAACGA TACGTCGAAACGACACGTTGGAACGGCACGTTGACACGAAACAACACACC AGATCTACGACGCGTTCTACCGGCTCACCGACCCGAAGGCGCAAATCCGT TCCTACGTGTACGACGTGGTCAGAAGTGAGTTTCTCCGTGCTGCACTGCT ATTTTGATACCTTGCCACAGTTTTGTTTTTTGTCGCAGCCCTATCTACGT GCAGCGATCGGCCGCTTTCGCTGCATATACCCACACGATCTTCTGTGTGT GCAGGCAGCGCGTGGAATGTTGGGGGCGGGGCTTGACTCCCGATTTTCCT GTGGTGGTTCTCCTTTTGGCTTTTCTTGGTGTCTTGGTCTTGTGGTCCTG GTTAGGGGCTTGGGTGCGCCCAAAGGACATGCAACGCGCTCGTGGTGGTG TACTTGTGTCACCCGTTCTCGTCGTGTGACGAGAGACGAAAGACCGGCGG ATATCTGTTAGCCGGCCGCGTTGTTTTGCGAAAATATAATTGGCCTCTCT TGCGTGCGGGAGTCTGTCTTATAAGGACGTGTGCCACAGGCTCCGTTTCG CGATCGAAAGAGTGCCTGCAGCGCGGTGCGCGCTTGGAGGTTTGTGGTCG AAAAAGTTCAGTCATTTGTATGCGCGTGGGTGGTCGTCGGTGTGAGTTTC TCAGAAGACGCTTGCCCACAGTAGTAGTTCGGTGGTTGCGTATGCACACT CGCCTGGCAGTTCGTTCCTTGTTCGTTGTGCTTGTTTTTTTGCACCCACG CCCCCCAATTGCTTCTGACGCCCGCGTTTGTCTGCCGTCACTTGCTTGCT TTTTTTTTTTTTTGTTCCCGTCCGGCGAATCATGTGTTGCGCCGCGTTTT CCGTGGCCATGCCGTGCCACCAGGTACCCTGCCTAAGTTGGACCTTGATC AGGCGTTCGACTCAAAAGAGGTACGTACTTACCGTTGTTGGATATCGCGG CGCCCCTGGAAAGATTGACAATAGTTTGTAGAGGGTATGGACGGTGGTGT GTAGCAGTAGAAAATGATGGGATCATTCGACCATGTGTTTTGAGGACTGC TACTGCTGTGGCCGCGCCGTTCTTTGCGTTTTCCTTCCAAGTAGCGGGCG TCTTGACAGCCTTGCAGCTGCTCGCCCCGCCATGCGCTTAAACCGGGCTA GAGTTGTGTGCACGCCGTCTCTCCTTTTTTTCCCCTCATATACAATACTC CGGAGTACATACAATGACTGCAGTGCCCACACATCGAGTAGCAGCATGTT TGCGAACGTGCGACCATGTAGCTTGCAAAGGACCTGCTGCTGGAGGAAGC CACGAAAATTGCACGCTCTTGCTTGCTTGTTGCTTCATCACGGCGAAACG ATCAAGCGTGATCACGACGAGGGCGCCCCACGCTCTATTCTTGCTTCATC ACGGCAAAACAAAACGAAGCGCGTTCTTCGGTGGAAGGCATTTTTCTTTC CCTCATATTTCCTTCCACCCCTCATACTTCCTTTCGACACGCTTGGTGGA AGGAATTTTTGTTTCCGTCATATTTCCTTCCACCCCTCATACTTCCTTTC GAAACGCTTGGTGGTGCTATTCGTCCCTCATATTTCCTTCCACCCCTCAT ACAAACTTCCTTTCGAAACGCTTGGTGGTGCTATTCATCCCTCATATTTC CTTTCACCCCTCACACAAACTTCCTTTCGAAACGCTTCACTTGGTGGTGC TATTTGTTGGGAAAACGGAAACAGGACATCGCCATCGCGGTGAAGAACCA GCTGGAGGAGGTGATGCAGGAGTACGGCTACCAGATCCTGCAGGCCCTCG TGACCGACATGGACCCGGACGCTCGCGTGAAGGGGGCCATGAACGAGATC AACGCTTCCAAGCGGCTGAGAGAGGCCGCCACCAACAAGGCCGAGGCCGA CAAGATCATGCAGGTGCTGTTTCAAGACGATGTTGTTCGTTTTGACTCGC TTTCCTCAAAGTGCTGGACAGCAGTGTTTGTGGTTGGGTCGGGGGAGGGG GGAACAGGTGTTGTTTTGACGTATGTACGCAGACGTTGTTTTTTTGTCTC GCTTTGCCGCAAAGCGCTGGACAGTTTTTTGGTTGGGTCGAGGGGGACAG GTGTTGTTTGGACGTACGTAGACGTTTTTTTTTTTTTGGCACGGAAGTAC AGGGCTACCTTTTGCGGTTGGGTTCTGCGGGTGGGTGTGCGGATAACGAG CGCAACTCGTGTTTTTGGCTGGCAGATACAGTACATCGGTCCGCTGACGT TTTTCGCTGACCCTGCCCGTTTGGCTAGGGGTGGTTTCGATGCGAGTGCT GATCGGCTGCATGCAGCATTGGCACGGATTGTTTGCCTGTGATAATTTTA AGCGTGGTGCTATGCCCAACGGTCTTTGGATCGCTCGCGTGAAGTTATCT TGTGGCTGCTACACACTCGCTCTGTTTTCCCCAGCTGACCGGTGACGTCG ATACTTCTGTCGACGCAGCTCCTGGGCAGATGTACTTGCTTTTTTTCGGA AACATACACGCAATCAAAGAAAGACTATTGTAGACTACAACCCGTTTAGA CGGAACAACCCTCAGCAGACAAGTTTTGTTTCGTATGTGCAGCGCTGACC CGCAACGGCGGGTGGCTTGTCCTTTTTTCTTCCTCTTTTTTTTTCACGCT CACAGGTGAAGGCGGCTGAGGCAGAGGCAGAGTCCAAGTACCTGTCAGGA GTGGGTGTGTCCAGGCAGCGCAAGGCTATCGTGGACGGCCTCCGCGACTC CGTGCAGACCTTCTCTGAAACCATCGACGGTGCGAAAAATAAATGTTTTT TGGAGCACCCCAAAGCTCACGCACACGGGCGAAAGAAAGCATGTTTTTGT CTGTTGGACGCAGCTGTTTTGTGTCCGGATGTGGGATTGGTGGTGTGGCA GGAGTAGTAGCCGGAAGAAGCGTCGTTCCGGCGGCGGTATCTAGCTGTGT TCCCCGGGGTGTGTTGTGTCTTCCGTGTCATGTCATCTTTTTGTCGACTT TTGTTTTCGTCTGGACCTGCGAAGGCGCTGTCTCTTGCTGTCTCGGTCGG TGGGGTTTTGCGTAACGGGTTGCCATACCGGATCGCGTACCTGCTTGCAA GACGGGGGACGGAGGAGGTGCACCTAAACATGCGCCGTGTCGGTTGCGGA AAACACGCGCAAGAAAGCTTCTTCTTCTTTCGTTGAATACGTGGGCTTTT GCTTCACAGGTTTAACAACACGTGCTCATTGCTTTCGATCGCAAAAAAAA AATGGTCATGTTATTAATTCTCCGCCTTCGTTTCTTCTCAGCGGCAGCTG TTCTGTTGCCTCTTCTGTCCTCTGCTCTGGCTTCCTCTTTTTTATTGCGG TTTTATGGCACGGATGATGACTGGGATTTTTTTTTCGCCTGATCGTGCTG GTTGCTATTGCTGCAGGGACTTCGCCGAAGGACGTGATGGATCTGCTCCT CCTGACCCAGTACTTCGACATGCTCCGCGACGTGGGCCAGTCCTCCCGCG CGGCGACGGTGTTCCTGCCGCACGCGCCGCAATCCGTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8429:563..6000+

>mRNA_E_fasciculatus_S2_contig8429.16561.1 ID=mRNA_E_fasciculatus_S2_contig8429.16561.1|Name=mRNA_E_fasciculatus_S2_contig8429.16561.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=792bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8429:563..6000+ (Ectocarpus fasciculatus EfasUO2)
ATGGCCTGCTGCTTCCAATGCATCCCCAACGCGGAGATCGGCGTGATCGA
GAGGCTCGGAAAGTACCAGGGCCTCGCCCAGCCGGGTTTCACCTGCATCA
TGTGGCCGCTCGACAGCATCGTGGCCAAGCTTTCCACGCGTGTGCAGCAG
CTTGACGTCCGCATGGAGACCAAGACGAAGGACAACGTGTTCGTCACGGC
CGTCGTGTCCGTCCAGTACCAGCCCATCAAGTCAAAGATCTACGACGCGT
TCTACCGGCTCACCGACCCGAAGGCGCAAATCCGTTCCTACGTGTACGAC
GTGGTCAGAAGTACCCTGCCTAAGTTGGACCTTGATCAGGCGTTCGACTC
AAAAGAGGACATCGCCATCGCGGTGAAGAACCAGCTGGAGGAGGTGATGC
AGGAGTACGGCTACCAGATCCTGCAGGCCCTCGTGACCGACATGGACCCG
GACGCTCGCGTGAAGGGGGCCATGAACGAGATCAACGCTTCCAAGCGGCT
GAGAGAGGCCGCCACCAACAAGGCCGAGGCCGACAAGATCATGCAGGTGA
AGGCGGCTGAGGCAGAGGCAGAGTCCAAGTACCTGTCAGGAGTGGGTGTG
TCCAGGCAGCGCAAGGCTATCGTGGACGGCCTCCGCGACTCCGTGCAGAC
CTTCTCTGAAACCATCGACGGGACTTCGCCGAAGGACGTGATGGATCTGC
TCCTCCTGACCCAGTACTTCGACATGCTCCGCGACGTGGGCCAGTCCTCC
CGCGCGGCGACGGTGTTCCTGCCGCACGCGCCGCAATCCGTG
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