mRNA_E_fasciculatus_S2_contig841.16545.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE) HSP 1 Score: 329 bits (843), Expect = 1.500e-103 Identity = 171/247 (69.23%), Postives = 193/247 (78.14%), Query Frame = 1
Query: 1 KLLGKMPIIPGASLTKRGLTFPGDDFRKRGRVVPGATLTLANRGLIREKTGA--PAHGSSSSPAVSVPASPSSSSSRQAPKKQGRCLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWSTTKSFGYALPESWNRVPAVRAHGWTWAIPVDTLLKVSDLRYWAQSELRRQGSFPEAKLASVVWPQGLKQLEFDLDSAVEQASWPASLHSLAFGNHFNRPITRV 735
+LL MPIIPG SLT GLTFPG++ RKRGRVVPG +L ++ EKT A P GSS+ QAPKKQ CLDAFVAVL HQS G+KRWYTSIRELQLVSL+FCG+CRST +LRVRV+H PPSLWS TKSF YALP++WNRVPAVRA+GWTW+IPVDTLLKV DLRYWA++EL R+GSFPEAKLASVVWPQGLKQLEFDLD+AVE+ASWPASL SL FG FN+PI V
Sbjct: 23 RLLRPMPIIPGTSLTTTGLTFPGNNLRKRGRVVPGGSLIHSSY----EKTDAKAPKQGSSAXXXXXXXXXXXXXXC-QAPKKQNLCLDAFVAVLNHQSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPDAWNRVPAVRAYGWTWSIPVDTLLKVCDLRYWAKAELSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPILGV 264
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 145 bits (366), Expect = 7.800e-35 Identity = 85/166 (51.20%), Postives = 104/166 (62.65%), Query Frame = 1
Query: 241 QGRCLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWSTTKSFGYALPESWN--RVPAVRAHGWTWAIPVDTLLKVSDLRYWAQSE-LRRQGSFPEAKLASVVWPQGLKQLEFDLDSAV---EQASWPASLHSLAFGNHFNR 720
Q RCLDAFV V + Q + GGEKRWYTS +LQL SLEFCG CRSTP+L V VD +TPP+LWS G A P + RVPAV+A G TWA P ++ L + W + E L+ Q S A L SVVWPQGL++L D + E SWP+SL SL F F++
Sbjct: 6 QRRCLDAFV-VALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS----LGQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 128 bits (322), Expect = 3.420e-28 Identity = 75/166 (45.18%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 250 CLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWSTTKSFGYALPESW-----NRVPAVRAHGWTWAIPVDTLLKVSDLRYWAQSELRRQGSFPEAKLAS--VVWPQGLKQLEFDLDSAVEQASWPASLHSLAFGNHFNRPI 726
CLDAF+ V + Q+ G KRWY S ELQLVSLEFCG CRS V++ +TP SLWS KS G S +RVPAV+A+GW WA+P++ LL S SE RQ + P + + + W Q L +L F + +V SWPA L L+FG+ FN+PI
Sbjct: 29 CLDAFI-VALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSE-NRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPI 192
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.910e-22 Identity = 65/139 (46.76%), Postives = 82/139 (58.99%), Query Frame = 1
Query: 244 GRCLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWSTTKSF---GYALPE--SWNRVPAVRAHGWTWAIPVDTLLKVSDLRYWAQSELRRQ-GSFPEAKLASVVWPQGLKQLEF 642
G LD + V ++Q+ G EKRWY S ELQLVSLE CG CRS +L V V TPP+LWS+ S PE + NRVPAV+A WTWA+P+D L + + +E R Q G A + SVVWP+ LK+L F
Sbjct: 87 GSSLDTLI-VALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVF 224
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 9.770e-17 Identity = 56/167 (33.53%), Postives = 87/167 (52.10%), Query Frame = 1
Query: 250 CLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWSTTKSFG-YALPESWNRVPAVRAHGWTWAIPVDTLLKVSDLRYWAQSELRRQGSFPEAKLASVVWPQGLKQLEFDLDS----AVEQASWPASLHSLAFGNHFNRPITRV 735
CL+A + V ++++ G K WYTS +ELQL SL+FC CR+ + + VD + P L ++ + + W RVP +R+ TW +P L+ L +F ++ L +V WP+ L+ +EF DS +E WP L ++ FG FN+PI RV
Sbjct: 51 CLEALI-VALNETCDG--KSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDS-LEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDFNQPIERV 213
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.030e-16 Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 238 KQGRCLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWS 426
++ +CLDAFV V ++Q+ G EKRWY S ELQLVSLEFCG CR P L VRVD +TP SLWS
Sbjct: 37 RRSKCLDAFV-VALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWS 98
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 2.710e-14 Identity = 56/157 (35.67%), Postives = 75/157 (47.77%), Query Frame = 1
Query: 247 RCLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLW---STTKSFGYALPESWNRVPAVRAHGWTWAIPVDTLLKVSDLRYWAQSELRRQGSFPEAKLASVVWPQGLKQLEFD--LDSAVEQASWPASLHSLAF 702
RCLDA + L S GGE WYTS +LQL SLE C CRS +L++ V H TPP LW +TT+ + RVP VRA TW +P L ++ + + F + + WP+ L + +VE S PAS+ L F
Sbjct: 42 RCLDALIIALNQAS--GGE--WYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLFGVGPGFNRSVEHLSLPASVRFLVF 194
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 9.340e-13 Identity = 52/168 (30.95%), Postives = 81/168 (48.21%), Query Frame = 1
Query: 250 CLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWSTTKSFG-YALPESWNRVPAVRAHGWTWAI--------PVDTLLKVSDLRYWAQSELRRQGSFPEAKLASVVWPQGLKQLEF----DLDSAVEQASWPASLHSLAFGNHF 714
CL + + V ++++ G WYTS +ELQ SLEFC CR+ P++ ++VD + P +L + + + W RVP +RA TW + P+ + V L + G+F + L +V WP+ LK +EF + +E WP SL L G F
Sbjct: 14 CLSSLI-VALNETCDGTS--WYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFG--------GTF-DGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVLGGDF 169
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 2.080e-11 Identity = 56/170 (32.94%), Postives = 74/170 (43.53%), Query Frame = 1
Query: 250 CLDAFVAVLIHQSWGGGEKRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWSTTKSFG-YALPESWNRVPAVRAHGWTWAIPVDTLLKVSDLRYWAQSELRRQGSFPEAKLASVVWPQGLKQLEFD-------------LDSAVEQASWPASLHSLAFGNHFN 717
CL+A + L S G K WYTS +E QL SLEFC CR+ L ++VD +TP L + + + RVP +RA TW IP L+ S L +F E L +V WP+ LK +E D + WP +L L FG N
Sbjct: 12 CLNAIIVALNETSDG---KSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAF-EDSLEAVAWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWPDTLEQLTFGLFLN 177
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 4.150e-11 Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 1
Query: 304 KRWYTSIRELQLVSLEFCGICRSTPVLRVRVDHKTPPSLWSTTKSFG-YALPESWNRVPAVRAHGWTWAIPVDTLLKVSDLRYWAQSELRRQGSFP--EAKLASVVWPQGLKQLEFDLDSA----VEQASWPASLHSL 696
KRWYTS +ELQ SLEFC CR LR+RVD +TP +L + + ++ RVP +RA W +P T LK +A ++ R P E L SV WPQ LK+++F S +E +P SL L
Sbjct: 5 KRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSP---IFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLEL 139 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig841.16545.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig841.16545.1 >prot_E_fasciculatus_S2_contig841.16545.1 ID=prot_E_fasciculatus_S2_contig841.16545.1|Name=mRNA_E_fasciculatus_S2_contig841.16545.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=504bp MPIIPGASLTKRGLTFPGDDFRKRGRVVPGATLTLANRGLIREKTGAPAHback to top mRNA from alignment at E_fasciculatus_S2_contig841:10322..14766- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig841.16545.1 ID=mRNA_E_fasciculatus_S2_contig841.16545.1|Name=mRNA_E_fasciculatus_S2_contig841.16545.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4445bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig841:10322..14766- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig841:10322..14766- >mRNA_E_fasciculatus_S2_contig841.16545.1 ID=mRNA_E_fasciculatus_S2_contig841.16545.1|Name=mRNA_E_fasciculatus_S2_contig841.16545.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1512bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig841:10322..14766- (Ectocarpus fasciculatus EfasUO2)back to top |