mRNA_E_fasciculatus_S2_contig8401.16539.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8401.16539.1
Unique NamemRNA_E_fasciculatus_S2_contig8401.16539.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J619_9PHAE)

HSP 1 Score: 551 bits (1421), Expect = 6.910e-197
Identity = 292/308 (94.81%), Postives = 298/308 (96.75%), Query Frame = 1
Query:   70 ATLPSRLRLSTCLPAIAVAQLFLRPGVNGLALNFPAACSSGARSATTASASGPLXXXXXXXXXXXAQDKVAMPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVPL 993
            ATLPSRL LST LPAIAVAQLFLRPGVNGL L+FPAACSSGARSAT   A GP+ XXXXXXXXXXAQDKVAMPFPTGSKPVKE++SPRPKLWIYDHCPYCVRPRM+FGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGS+DHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLD WVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSE VDVPL
Sbjct:    4 ATLPSRLCLSTFLPAIAVAQLFLRPGVNGLTLSFPAACSSGARSAT---AGGPVMXXXXXXXXXXAQDKVAMPFPTGSKPVKEIESPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSDDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDSWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPL 308          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR2_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 7.400e-168
Identity = 233/237 (98.31%), Postives = 235/237 (99.16%), Query Frame = 1
Query:  283 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVPL 993
            MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRM+FGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSA MLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYND+EFFPRMRGLTIVQGLGIPPKLRAYLDAVSE VDVPL
Sbjct:    1 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPL 237          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK)

HSP 1 Score: 226 bits (576), Expect = 1.030e-68
Identity = 109/221 (49.32%), Postives = 151/221 (68.33%), Query Frame = 1
Query:  334 PKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTPLA-EFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVPL 993
            P++++YDHCPYC R R+I GLK I H+L +++NDD +TP ++VGKKM PI E        HE+MAES+DI+ RLD DP++GPP+L PA DR D   W++   +L  RLV PR A +PL  EF  + ARE +V+ HPLP PS Y+     SP+ +EE+  +L +LE MI S     A G LS +D+E F R+RGLT+V+GL  PPK++AY++ +S+   VPL
Sbjct:   88 PRVFLYDHCPYCTRVRIILGLKNIKHELVWMANDDFDTPISLVGKKMAPIFEYNSE-ERGHEVMAESLDIIARLDSDPKWGPPLLRPASDRTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTAGG-LSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPL 306          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Glutaredoxin (2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP)

HSP 1 Score: 212 bits (540), Expect = 3.600e-64
Identity = 98/220 (44.55%), Postives = 147/220 (66.82%), Query Frame = 1
Query:  334 PKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPP-VLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVP 990
            P+L++Y HCP+CVR +   GLK I H+L +L+NDD+ TPTA+VGKK+VPILE+GRPG   HE+M ES+DI+KR+D DP FGP  ++ PA  R+D+D W+  +  L RRL+ PR    PL EF    AR A++RNH +PEP  Y+ N   S +L+ ++   + KL+ ++       ++G +S +D+  F R+R L +++G   PPK++AY+D   +  D+P
Sbjct:   22 PRLYLYAHCPFCVRVQTALGLKNIKHELVFLANDDVATPTALVGKKVVPILEIGRPGQPGHELMNESLDIIKRIDEDPAFGPTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVPLPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQH-CSEGGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIP 240          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ8_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.270e-63
Identity = 106/215 (49.30%), Postives = 151/215 (70.23%), Query Frame = 1
Query:  334 PKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVD-RKDLDGWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSE 975
            P+L+IYDHCP+CVR RMIFGLK I H+L ++S+DD +TP  +VGKK+ PILE+     +D E+M ESMDIV R+D DP++G P+L    + R+DL  W+     L RR +  R+ + PL EFQ RSARE F++ HPL EPS Y  N   S  L+EE+ ++L +L+ MI SP     DG LSY+DI  F ++R +T+++G+ IPPK++AY++++SE
Sbjct:   74 PQLYIYDHCPFCVRARMIFGLKSIKHNLVFMSSDDWDTPEGLVGKKVAPILEIKHEDGKD-EVMPESMDIVWRIDNDPKYGQPLLKGKPELREDLAQWMKDTRDLFRRALHTRHVMVPLPEFQFRSAREVFIQRHPLAEPSDYNENYYNS-ALVEEMNQKLLELDAMIFSP-ECCTDGGLSYDDIAVFGKLRSVTLIRGIKIPPKMKAYIESMSE 285          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Glutaredoxin (2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ45_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.040e-62
Identity = 112/223 (50.22%), Postives = 151/223 (67.71%), Query Frame = 1
Query:  331 RPKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPEPS-SYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVPL 993
            RP L+IYDHCP+CVR R+IFGLK I H L +L NDD +TPTA+VGKKMVPILE+     E   +M ESMDIVK +D DP++GPPVL    DR+D+  +  S   L RR  RPR A++  L EF T +AR AFVRNHP   P   Y  NL+ +  L+ +L   L +L+ M+ S   V  +G +SY+D++ F ++RGLT+V GL +PP+L+AY++A  E  ++PL
Sbjct:   52 RPNLYIYDHCPFCVRARIIFGLKRIPHQLIFLDNDDADTPTALVGKKMVPILEMIDAQGE-RVVMPESMDIVKLIDEDPRWGPPVLRRGSDREDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQ-NKSLVADLSARLRELDAMLFSDECVT-EGGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPL 271          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: GST (N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC)

HSP 1 Score: 207 bits (526), Expect = 6.590e-61
Identity = 113/226 (50.00%), Postives = 149/226 (65.93%), Query Frame = 1
Query:  334 PKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELG--RPGSEDHEIMAESMDIVKRLDLDPQFGP--PVLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTS-VAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVPL 993
            P+L++YDHCP+CVR RMIFGLK I HDL Y++NDDIETPT ++GKKM PILE+   RPG  +  IM ES+DIVK +D   + G   P+L P   R DL  W+ S     RRL RPR A +  L EF   SAR  ++  HPL  PSSYE N + S + I  L   L KL+GMI +P     ++G +SY+DI+ FPR+R L+IV+GL  PP ++AY++ +S+  DV L
Sbjct:  108 PRLYVYDHCPFCVRARMIFGLKNIKHDLVYMANDDIETPTHLIGKKMAPILEVRGRRPG--EGLIMPESLDIVKYIDESEEIGAGLPLLKPFSGRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISEGGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVAL 331          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Glutaredoxin (2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN8_9FLOR)

HSP 1 Score: 199 bits (507), Expect = 2.480e-59
Identity = 105/235 (44.68%), Postives = 150/235 (63.83%), Query Frame = 1
Query:  292 PTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPP-VLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVPL 993
            PT S P + + SP P L++YDHCP+CVR R + GLK I ++L +L+NDD+ TPTA+VG+K+VPI +   P         ES+DI K +D DP+FG P +L  A  R D+  W+    M MRRL R R +  PL EF  + ARE ++RNHPL +P  YE N   S + I +++  L +L  MI+SP   +  G LSY+DI  FPR+R LTIV+GL +P +LR Y++  + + ++P+
Sbjct:    2 PTPSLPPRVVLSPLPTLYVYDHCPFCVRVRHLLGLKNIKYNLVFLANDDVTTPTALVGRKVVPIFQ---PQGTGGPAQPESLDICKHVDNDPRFGAPGLLKSATPRDDIAKWMDELAMPMRRLSRVRFSRAPLPEFVFQEARETYIRNHPLSDPGDYEDNFDRSTEYITQVQERLDELAEMIYSPEHCSPHG-LSYDDIVLFPRLRTLTIVKGLVLPKRLREYVEFQAAAAEIPV 232          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Hypothetical (protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M661_9CRYP)

HSP 1 Score: 196 bits (499), Expect = 1.360e-57
Identity = 110/247 (44.53%), Postives = 151/247 (61.13%), Query Frame = 1
Query:  307 PVKEMDSPRPKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLP-----------------EPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVPL 993
            P   + +P P+L++YDHCP+CVR R I G K I H++ +L+NDDIETPT +VGKK+VPILE+   G    E+M ESMDIVKR+D DP FGP +L PA  RKDL  W      L R L RPR   +  L EF  ++ R+A+VRNH LP                   + Y   L+ +P L+      + +L GMI S     ++G LSY+D++ F R+R LTIV+GL +P  +RAYL++++ + DVPL
Sbjct:   32 PALVVGTPVPRLYVYDHCPFCVRVRFIMGFKNIKHNVVFLANDDIETPTKLVGKKVVPILEIPSYG----EVMKESMDIVKRIDEDPTFGPQLLKPASGRKDLSEWQDKHQDLFRLLQRPRYVSSGILPEFSQQAGRDAYVRNHALPPYAKEEWSDDKRLPRAMRYAKYAEALQQTPALLPAAAAAVQELGGMIASAQH-CSEGGLSYDDVDLFGRLRSLTIVRGLPLPDTVRAYLESMAAAADVPL 273          
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Match: Hypothetical (protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PI71_9DINO)

HSP 1 Score: 190 bits (483), Expect = 1.260e-55
Identity = 99/226 (43.81%), Postives = 149/226 (65.93%), Query Frame = 1
Query:  316 EMDSPRPKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSESVDVPL 993
            E+ +  P L++YDHCP+CVR RMIFGL+G+ + LA+L NDD+ TPT ++GKK++P+LE      E  + M ES+DIV ++D       PVL P+ DR+D+  W     ML+R+L RPR A   L EF T+++R+ +++NH   + + ++  L+AS  LIEEL  +L KL+ ++ S  SV A G +SY+DI  FP +R LT+V+G+  P KL  Y   ++++ DVPL
Sbjct:   26 ELSTELPTLYVYDHCPFCVRARMIFGLRGLPYKLAFLLNDDVVTPTKLIGKKVLPVLE------EQGKAMGESLDIVAKVD----GSDPVLKPSADREDIAAWQKDNRMLIRKLTRPRVAEAILPEFATKASRDTWIKNHQFADGTQFDECLQASSDLIEELNGQLPKLDALLDSDVSVNAGG-VSYDDITLFPLLRTLTLVKGVAWPEKLLQYTRNMADASDVPL 240          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8401.16539.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.910e-19794.81protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized7.400e-16898.31protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical1.030e-6849.32protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Glutaredoxin3.600e-6444.552 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID... [more]
Hypothetical3.270e-6349.30protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Glutaredoxin2.040e-6250.222 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ4... [more]
GST6.590e-6150.00N-terminal domain-containing protein n=1 Tax=Vitre... [more]
Glutaredoxin2.480e-5944.682 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID... [more]
Hypothetical1.360e-5744.53protein n=1 Tax=Cryptomonas curvata TaxID=233186 R... [more]
Hypothetical1.260e-5543.81protein n=1 Tax=Brandtodinium nutricula TaxID=1333... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8401contigE_fasciculatus_S2_contig8401:2012..6614 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score479.6
Seed ortholog evalue1.2e-132
Seed eggNOG ortholog2880.D7FTR2
Model size996
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Glutaredoxin 2, C terminal domain
EggNOG OGs2RYF1@2759,COG2999@1
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-14_001150.1
Cds size996
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842499.761471-CDS-E_fasciculatus_S2_contig8401:2011..23911696842499.761471-CDS-E_fasciculatus_S2_contig8401:2011..2391Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8401 2012..2391 +
1696842499.7727363-CDS-E_fasciculatus_S2_contig8401:3909..40481696842499.7727363-CDS-E_fasciculatus_S2_contig8401:3909..4048Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8401 3910..4048 +
1696842499.7814915-CDS-E_fasciculatus_S2_contig8401:4526..47061696842499.7814915-CDS-E_fasciculatus_S2_contig8401:4526..4706Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8401 4527..4706 +
1696842499.7898173-CDS-E_fasciculatus_S2_contig8401:5491..55811696842499.7898173-CDS-E_fasciculatus_S2_contig8401:5491..5581Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8401 5492..5581 +
1696842499.7988524-CDS-E_fasciculatus_S2_contig8401:6407..66141696842499.7988524-CDS-E_fasciculatus_S2_contig8401:6407..6614Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8401 6408..6614 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8401.16539.1prot_E_fasciculatus_S2_contig8401.16539.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8401 2012..6614 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8401.16539.1

>prot_E_fasciculatus_S2_contig8401.16539.1 ID=prot_E_fasciculatus_S2_contig8401.16539.1|Name=mRNA_E_fasciculatus_S2_contig8401.16539.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=332bp
MLTPPATCRTGKSKQTKDESMLTATLPSRLRLSTCLPAIAVAQLFLRPGV
NGLALNFPAACSSGARSATTASASGPLMASSSSAAAAAAQDKVAMPFPTG
SKPVKEMDSPRPKLWIYDHCPYCVRPRMIFGLKGITHDLAYLSNDDIETP
TAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAV
DRKDLDGWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEP
SSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPR
MRGLTIVQGLGIPPKLRAYLDAVSESVDVPL*
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mRNA from alignment at E_fasciculatus_S2_contig8401:2012..6614+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8401.16539.1 ID=mRNA_E_fasciculatus_S2_contig8401.16539.1|Name=mRNA_E_fasciculatus_S2_contig8401.16539.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4603bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8401:2012..6614+ (Ectocarpus fasciculatus EfasUO2)
ATGCTGACACCCCCGGCGACTTGCAGGACAGGAAAGAGCAAGCAAACTAA AGACGAGAGCATGCTCACGGCCACTCTTCCCTCCCGGCTGCGTCTCTCGA CCTGCCTGCCTGCCATTGCTGTGGCACAACTATTCCTTCGACCCGGGGTG AATGGTCTGGCCTTAAACTTTCCTGCTGCGTGTTCCTCCGGAGCTCGATC TGCTACTACGGCTTCGGCGAGCGGACCTCTGATGGCCTCCTCATCCTCTG CTGCTGCTGCGGCTGCACAGGACAAGGTCGCGATGCCCTTTCCGACTGGA AGCAAGCCCGTCAAGGAGATGGACAGCCCTCGGCCGAAGCTCTGGATCTA CGACCACTGCCCTTATTGCGTTAGGCCACGGTGAGCAGCAGTAGCATTTG AACAACAACGTACCCCGCCGTAGCAGCGAAGTCAGCACCAGTTGCACACC TAAAACTGCAGCAGCGGTGATGTCCCTTTCTTCACTCCAAATCCCGGCTG TTGTTGGGGGATATCATCGGACACAGCAGGAGTTGTCCTTCGCTGGGGAG CACCGCGACTATCGATCGAGCACCAGGAGGCCCTACCGCTTTGGGCCAGG GCTGAACGATGCATGAAGCCTACAACAGTCAGCCGGGCTCACATATTTCT TTTGTGCGTACCGAGCTTGTGGCGACGCTACCTGCTGTTACTCACTCAAA GATCACTTGGACCGACGAGCGGGCCTCCTGCAGGACACCTTTGTAGACCT TTAGTATCATACCAACAGCGGTAGCAATCTACAGCAGTACTGCCGGTGCC ATGCAGTATGATTTCTGGCTGGCTCACGCGTAGCAGCATGGAGAGCCCCC CACTCTCGATCTTGCCATATTGCATTCGTATGTGTACTGCTACACACCGG AGCACTCATCAGGCTATCAGCCCGAGTCTTCCCGAAGATACAGCAGCATC CATCCTGGATACGTGGATAATAGATGATCACGGAGGATAAAATATGTACC TTTGTAAGCACATGTAGCATACATTGAACAGCAGCACCGTCGCGTTTTTG CGTGATCAAGTGAGGTTCGTTGTTGATACTGCTGCTTTTCCTTCTCCATG TGCATACTAATAAGACCGTGCCGATCCTCTGCTCGTACTACTTGTACCTC GCATTCCCTTGTCTTGGTCCCACTGCTATCTATCGCGGACTTACTTTCTT GGTCACCGGCGACGGTACTATCTGTAACTGCTGTAACTGCTGCACAGGGA AGGGTTCCCAAATTCTGAAAGAGGCAGGATGAATGTTACAGCAGTGCCGG CTATCGACAGCATATACCAATCGATGTACCGCCGTAGGGTGCATCAGGCA TCACACACCACACCCTGGATCGATTCTCAAACCTTCAGTACTCGGCAGGA AAGCTATGGAACTGCAGTCTTGTCGAGAGCTTTCCGAAAAGTACCACTTG ATTTCAGCATCCCCTTCGTCGTGGAACAGCGGTACAAGAGGTCTGCTGCG TTTCAATTACATCGAAATTTCTCCTTTGTTTGAGAAGAGAAGACGGCAGA CCAATTTTCTGGCAACACCCTAATCCAAATTTTTTGTGTTGATGGTACCC GGGTCACATACATCCCCGCGTGGGTGAACCCACAACCGGAAGCCCAGAAG AAAACTAACTCCCGTGTCGGATCGGTTGCATCAACCGACATGACATCGAG GGTCAGGAAACTGAGCTGCATCATTACAACACCCACGCGGTTGTTGCGCA TTACAACACCCACGCGGTTGTTGCGCCCTGCTTTTGAGCTCGAGTCCTCC CCAACTCCAACCCCCACCCCCGCCGCAAGTCCCGACAAGCACAGACGTTG ACTGCCCACGTCCGCTCCCCGCCTTGCCGTCGTCGAATTGCGATCCAGCA TGATTTTTGGGCTCAAGGGGATCACGCACGACCTGGCGTACCTGTCGAAC GACGACATCGAGACGCCAACCGCCATGGTCGGCAAGAAAATGGTCCCGAT TCTCGAGCTCGGCCGCCCTGGGTCCGAGGACCACGAGGTGCGTCGTTGTA GTTGTGGTTGGTTGTTGGTGTTACTTGCTCTCTTCACAAAAACAACCCAG ACCTTCTGTGTTGTCACCTCATGGTATCTTGTTTCTCTGTTGAGGTGTAG GAGGCCGTGCTCGGGAAGGTATCGATTCGGTTAGGGTCGGGAAGGGTACA GCAGTGCTCGCGTTGTTGTTTACCCCATCCCCTGTTTGCTGTTTTACCAT CACCCTTTCGTCTCCTTTGCATCTTATCGTCAAATGATACGTGTTTGTTT GTGTTTGTGCATATAACTGTTTTTTTTTCTTTTTTCCGTCGTCTAATAGG AGGTTTGATCCATGATGATCTCGTGAGTTTGTGCATCAGCTGCTACCGGC GGTGTTTTTTCTTTTTCGTCTTGTCTTGATCGGGTCGCTTTTACATTTAC ACGTGTGGCGTTGCGTCCTTACGCGGAACGCTACTGCCATTACCATGTTT CCATTACTGTACCAGATCATGGCCGAGAGCATGGACATCGTCAAGAGGCT GGACTTGGACCCCCAGTTCGGCCCTCCCGTGCTGGCCCCCGCCGTCGACC GCAAAGACCTGGACGGTTGGGTTTCCTCCGCCGGCATGCTGATGCGCCGC CTCGTTCGTCCGAGGAACGCCGTCACGCCTCTCGCGGAGTTCCAGGTGAA TAACTCGTGTACCATACCGTCATGGGATGTTGTTGCTGATGGTATTGGTT GTCTTGCATTGAATTGTTTTCTTGGTCTCGGTTTTTCTGTGGTTGTATCA TAGCAGTCTGGTTCATTTGGTCGATAGCTGTGGCTCGACTACAGAGAGTT TTACATTCGAGTGTACATTTACCACCACCTTCAAGGCTGCATGGTTATGC CATGAAAGGTTGTTTGGTTGTTCTTGTTTTAACTCTTTTGTGCTGTTTTA GAGTGAGGAGCGGCGGTATACCGTCGTGGACTCGGGGTTGGTTTTTGCGT TGGGAGTGATTGGAATCTGTCAGGACTGGGCACAGATGATGGACCGAACG TGCTTTGAAGCGCTCTGCACTTGGCACGACAGTTTGGGTTGGTCGAAAAA GGCAACACATCGCATGCCACGTGACCCAGATATCATTGGTGTATTCGTAG TATCGACACCTCCAAAGGTACATACTCATGATGTACCATCGCTTTCATGG AGGTGTTATGTAGCATTCTGTCTCACTTGGCGGAGAGGGCAAGACAAAAA CCGTACACAAGAGAGACAGGTGGACGGGACTGTGCGTAACTACCATTCAC CTCCGGTGCACACGGCCGGAAGTTGTATTGTGCGGGGTGGTTCGCGTATA CACTACATAGCTCAAAGGGATGGCAGGCGTGCCAACGAGTTTACTTAGAC TACAGCCCTTTCCCGAGCTATCGCACCGGTGTCACCAACCATGCTGACAG TAACTGACGTACGCAACTCCCTCTCTCCAGACCCGATCGGCGAGGGAGGC CTTTGTCCGCAACCACCCGCTGCCGGAGCCCAGCAGCTACGAGGCCAACC TGAAGGCGTCGCCCAAGCTGGTAAGTAAGCCTCATCGTCGTGTATTTTGT TATCCTCGGCATCAGTCTGCCGTGCGCAAAACCCTGGCCGCTATAATACT CTCCATGCTCCAACGATGCCTCTAAGTGGTTTTAGAAACCTCACTTGTCG GTTTAAACCGCGCAACGCGCCGCCTCAACTGTCAAGCAGTGTCTTCTTGT CCCCGCTTGCTCAAAGCGCCGGTGCACAATCTAGGTGGTGGAAAGATACA CGGGCTTGGCGTTGGGGGGAATGGGGCGTTTCTGTGGGTGGCCTTGGTCC TTTGAGGTACTTTGAGGTCCTTTGAGCAGGGACTGCATCCCTTTTGAGAC GGAGCATCGCTGCCACGCCTTGTGGGGATGACCGCCAACGCTCCGATGTT TACTACTTGCTAGCGCGGGGGGTTGTGCCTCATTTGCTCCGTAATTCTTC GTCATTGGTGGTCACTACGAAGCGTGGGGGGCGAGGGCCGTGCGAGTCCC GCTCGAACACGCCGCTTCTTCTCGCGTCTAGCAAGACGACGCAACGAACA CGCCGTTTCTTCTCGCGTCTAGTAAGACGACGCAACGAACACGCCGCTTC TTCTCGCGTCTAGCAAGACGACGCAACGAACACGCTTCTTGGAAATTCGA ACACGCTTCTTGGAAATCGAACACGCTTCTTGGAAATCGAACGCGCTTCT TGGAAATTGGCCACACCCCACATCTGTGCTACACGTTCATGGTGGCGGGA GTACACCCGGCAACCTTGCCCTCGTCGAACGCGCTCGTTTTTGTTTGTCC TTGCCTCTCGCCGACGCACTGCTGACGTCCGCCCCCGTACCGGCAGATCG AGGAGCTAGAGCGCGAGCTGTGGAAGCTTGAGGGCATGATCCACAGCCCC ACCAGCGTGGCGGCGGACGGGAAGCTGTCGTACAACGACATAGAGTTCTT CCCGCGCATGCGTGGCCTCACGATCGTGCAAGGCTTGGGCATCCCACCGA AGCTGCGAGCGTACCTCGACGCCGTCTCGGAGAGCGTGGACGTTCCGCTG TGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8401:2012..6614+

>mRNA_E_fasciculatus_S2_contig8401.16539.1 ID=mRNA_E_fasciculatus_S2_contig8401.16539.1|Name=mRNA_E_fasciculatus_S2_contig8401.16539.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=996bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8401:2012..6614+ (Ectocarpus fasciculatus EfasUO2)
ATGCTGACACCCCCGGCGACTTGCAGGACAGGAAAGAGCAAGCAAACTAA
AGACGAGAGCATGCTCACGGCCACTCTTCCCTCCCGGCTGCGTCTCTCGA
CCTGCCTGCCTGCCATTGCTGTGGCACAACTATTCCTTCGACCCGGGGTG
AATGGTCTGGCCTTAAACTTTCCTGCTGCGTGTTCCTCCGGAGCTCGATC
TGCTACTACGGCTTCGGCGAGCGGACCTCTGATGGCCTCCTCATCCTCTG
CTGCTGCTGCGGCTGCACAGGACAAGGTCGCGATGCCCTTTCCGACTGGA
AGCAAGCCCGTCAAGGAGATGGACAGCCCTCGGCCGAAGCTCTGGATCTA
CGACCACTGCCCTTATTGCGTTAGGCCACGCATGATTTTTGGGCTCAAGG
GGATCACGCACGACCTGGCGTACCTGTCGAACGACGACATCGAGACGCCA
ACCGCCATGGTCGGCAAGAAAATGGTCCCGATTCTCGAGCTCGGCCGCCC
TGGGTCCGAGGACCACGAGATCATGGCCGAGAGCATGGACATCGTCAAGA
GGCTGGACTTGGACCCCCAGTTCGGCCCTCCCGTGCTGGCCCCCGCCGTC
GACCGCAAAGACCTGGACGGTTGGGTTTCCTCCGCCGGCATGCTGATGCG
CCGCCTCGTTCGTCCGAGGAACGCCGTCACGCCTCTCGCGGAGTTCCAGA
CCCGATCGGCGAGGGAGGCCTTTGTCCGCAACCACCCGCTGCCGGAGCCC
AGCAGCTACGAGGCCAACCTGAAGGCGTCGCCCAAGCTGATCGAGGAGCT
AGAGCGCGAGCTGTGGAAGCTTGAGGGCATGATCCACAGCCCCACCAGCG
TGGCGGCGGACGGGAAGCTGTCGTACAACGACATAGAGTTCTTCCCGCGC
ATGCGTGGCCTCACGATCGTGCAAGGCTTGGGCATCCCACCGAAGCTGCG
AGCGTACCTCGACGCCGTCTCGGAGAGCGTGGACGTTCCGCTGTGA
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