mRNA_E_fasciculatus_S2_contig8376.16507.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8376.16507.1
Unique NamemRNA_E_fasciculatus_S2_contig8376.16507.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD6_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 2.880e-139
Identity = 232/341 (68.04%), Postives = 255/341 (74.78%), Query Frame = 1 
Query:    1 RGAAQQKENEEPVQGESHREWGGGGMVEGNDERVREKGTQGLASGVTELVKS--HEPEVPPSGAAMKRFIQETLPEMTRLTKTLERSNVSSGVGGFFYHSNMAYMKAVDGDLEALVRSLQACVAVVLRYPGMVRFRPHFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFCRSFEAEIHNARHGQEPVQTDARGCEDVTSGPALGLMTSPCSGAEHESSGSPPAGLASEERWPPPPATATGATMSLLLAENLPAPPSLLQDGVGHNDEAGDFARDMRWQPAAETAMLITESAISAKAEEGGDVRADRSGAAAASGQPLCS 1017
            RGAAQ+KENEEPVQGESHREWGG GMVE N ERVR KGT+G AS   ELV S   EPEVPPSGAAMKRF+QETLPEMTRLTKTLERSNV SGVGG FYHSN+AYMK V+GD+E L++ LQA   +VLRYPG+VRFRPHF+HCTL VSHFS RRDMYDAM   YNSIRP GCWRAPPYEEWRT+TQICDN+FCRSFEAEIH A HG+  +QT+    EDVTSGPA G M SPC GAE ++ GS PA L   +R P          +   L E   APPSL +DGV + D   D ARD R QP AETAMLI ES  SA+A E G VRA  S AAA  GQ  CS
Sbjct:   93 RGAAQRKENEEPVQGESHREWGGSGMVEENGERVRGKGTRGPASDDNELVDSLHDEPEVPPSGAAMKRFVQETLPEMTRLTKTLERSNVCSGVGGLFYHSNVAYMKTVNGDVEDLIKCLQASADIVLRYPGIVRFRPHFIHCTLAVSHFSKRRDMYDAMNGVYNSIRPPGCWRAPPYEEWRTITQICDNMFCRSFEAEIHKAHHGEGLMQTNVSDNEDVTSGPASGSMKSPCIGAERQNGGSLPAELC--QRLPVSMTPTDATAVPSPLPEPRHAPPSLSEDGVRNGDTGADDARDRRRQPVAETAMLIPESVFSAEAAEAGGVRAGWSSAAAGPGQQFCS 431
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 2.360e-83
Identity = 180/337 (53.41%), Postives = 216/337 (64.09%), Query Frame = 1 
Query:    4 GAAQQKENEEPVQGESHREWGGGGMVEGNDERVREKGTQGLASGVTELV-KSH-EPEVPPSGAAMKRFIQETLPEMTRLTKTLERSNVSSGVGGFFYHSNMAYMKAVDGDLEALVRSLQACVAVVLRYPGMVRFRPHFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFCRSFEAEIHNARHGQEPVQTDARGCEDVTSGPALGLMTSPCSGAEHESSGSPPAGLASEERWPPPPATATGATMSLLLAENLPAPPSLLQDGVGHNDEAGDFARDMRWQPA-AETAMLITESAISAKAEEGGDVRADRSGAAAASGQ 1005
            GAA  +E  EPV GES+RE GGGG++E   ++VR   + G+A    EL  +SH EP+VPP+G AMKRF +E LPEMT L KTLE S+  SGVGG  YH N+AYM+A+ GDL+    SLQACV VVLRYPG+VRFR H +HC L  SHF NRRDMYDAM+  YNS+ P G  + PPYEEWRT+ Q+C ++ CRS EAE    R+G+ PVQT+A   E VTS P+ G MTSP SGA+ +SSG+PP GLASEE+    P TATGAT       + P   +     V  ND  G    DM  Q     TAM I E   SAK E GG   A  S AAA   Q
Sbjct:  421 GAAPHEEKGEPVLGESYRELGGGGVMEEGGKQVR---SAGVACDDEELANRSHREPDVPPTGPAMKRFAREALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAIAGDLDKSFESLQACVDVVLRYPGLVRFRSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVMCRSMEAE-RLQRYGEGPVQTNAPSEEPVTSEPSPGSMTSPLSGADSQSSGAPPEGLASEEQGSLAPTTATGATAVSSPLPDTPHTSATFVQDVDGND--GAATGDMPLQRGLVATAMPIPELVYSAKGEAGGVRHAGWSRAAATGEQ 751
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD9_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 6.270e-76
Identity = 172/341 (50.44%), Postives = 207/341 (60.70%), Query Frame = 1 
Query:    4 GAAQQKENEEPVQGESHREWGGGGMVEGNDERVREKGTQGLASGVTELVKSHEPEVPPSGAAMKRFIQETLPEMTRLTKTLERSNVSSGVGGFFYHSNMAYMKAVDGDLEALVRSLQACVAVVLRYPGMVRFRPHFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFCRSFEAEIHNARHGQE-PVQTDARGCEDVTSGPALGLMTSPCSGAEHESSGSPPAGLASEERWPPPPATATGATMSLLLAENLPAPPSLLQDGVGHND-EAGDFARDMRWQPA-AETAMLITESAISAKAEEGGDVRADRSGAAAASGQPLCS 1017
            GAA  +EN EPV G+S+RE GGGG++E   +R+           +   V   EP+VPP+G+AMK  I+E LPEM  L KTLE S+  SG GG  YH N+AYM+A+ GDL+    SLQACV VVLRYPG+VRFR H +HC L  SHF NRRDMYDAM+  YNS+ P G  + PPYEEWRT+ Q+C ++ CRS EAEI   +H  E P QT     E VTS P+ G + S  SGA+ +SSGSPPAGLASEE+    P TATGAT    ++  LP  P  L   V   D   G    DM  Q     TAM I ES  SAK + GG   A  S AAA    P  S
Sbjct:  204 GAAPHEENGEPVLGKSYRELGGGGVMEEGRKRMWNADVAWEDEELGNQVH-REPDVPPAGSAMKLLIREALPEMASLAKTLESSDTCSGAGGVLYHGNVAYMRAIAGDLDKAFESLQACVDVVLRYPGLVRFRSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVLCRSMEAEI--LQHLDEGPGQTTNASEEPVTSEPSPGSIKSFRSGADSQSSGSPPAGLASEEQGSLAPTTATGATA---VSSPLPDTPHTLATFVQDVDGNDGAATGDMPLQRGLVATAMPIPESVYSAKGDTGGVRHAGWSRAAATGEHPRSS 538
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 5.590e-73
Identity = 171/343 (49.85%), Postives = 206/343 (60.06%), Query Frame = 1 
Query:    4 GAAQQKENEEPVQGESHREWGGGGMVEGNDERVREKGTQGLASGVTELVKSHEPEVPPSGAAMKRFIQETLPEMTRLTKTLERSNVSSGVGGFFYHSNMAYMKAVDGDLEALVRSLQACVAVVLRYPGMVRFRPHFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFCRSFEAEIHNARHGQEP-VQTDARGCEDVTSGPALGLMTSPCSGAEHESSGSPPAGLASEERWPPPPA--TATGATMSLLLAENLPAPP----SLLQDGVGHNDEAGDFARDMRWQPA-AETAMLITESAISAKAEEGGDVRADRSGAAAASGQP 1008
            GAA  +EN EPV G S+RE GGGG++E   +R    G       +   V   EP+VPP+G AMK  IQE LPEMT L KTLE S+  SGVGG  YH N+AYM+AV G+L     SL+ACV VVLRYPG+VRF+ H +HC L  SHF NRRDMYDAMK  YNS+ P G  +APPYEEWRT+ Q+C +I CRS E E+H  +H  E  VQ +A   +  TS P  GL  S  SG++ +SSG PPAGLA            TATG T    ++  LPAPP    + + DG G++   G  A DM  QP    TA LI ES  SAK E G    AD   AAA   +P
Sbjct:  424 GAAPHEENGEPVLGGSYRELGGGGVMEEGGKREWNAGVTWEGEELANRVH-REPDVPPAGPAMKLLIQEALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAVAGELVKAFESLEACVDVVLRYPGLVRFKSHLIHCMLAASHFFNRRDMYDAMKRVYNSVGPMGYPQAPPYEEWRTIRQVCPHILCRSLEVELH--QHLDEGLVQANAAPKDPETSEPLSGLFNSTLSGSDSQSSGPPPAGLAXXXXXXXXXXXXTATGVTA---VSSPLPAPPHTFPTFMPDGGGND---GASAGDMPLQPGLVATATLIPESVYSAKGEAGDVRHADWLHAAATGERP 757
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 4.250e-69
Identity = 176/375 (46.93%), Postives = 216/375 (57.60%), Query Frame = 1 
Query:    1 RGAAQQKENEEPVQGESHREWGGGGMVEGNDERVREKGTQGLASGVTELVKS--HEPEVPPSGAAMKRFIQETLPEMTRLTKTLER---SNVSSGVGGFFYHSNMAYMKAVDGDLEALVRSLQACVAVVLRYPGMVRFR--PHFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFC-----------------------RSFEAEIHNA-------RHGQEPVQTDARGCEDVTSGPALGLMTSPCSGAEHESSGSPPAGLASEERWPPPPATATGAT-MSLLLAENLPAPPSLLQDGVGHNDEAGDFARDMRWQPA-AETAMLITESAISAKAEEGGDVRADRSGAAAASGQP 1008
            RGAA  +EN EP  G+S+RE GGGG++E   ++VR   + G+A    EL      EP+VPP+G AMKRF +E LPEMT L KTLER   +   + V       N+AYM+AV G+L     SL+ACV VVLRYPG+VRFR   H +HC L  SHF NRRDMYDAM+  YNS+ P G  + PPYEEWRT+ Q+C +I C                        SF A +  +       R+G+ PVQT+A   E V S    G +TSP SGA+ +SSG+PP GLASEE+    P  A G T +S  L E      + + DG G ND+A   ARDM  QP    TAM I E   SAK E GG  RAD SGAAA  GQP
Sbjct:  416 RGAAPHEENGEPALGDSYRELGGGGVMEEGGKQVR---SAGVACDDEELANRLHREPDVPPTGPAMKRFAREALPEMTSLAKTLERFVPTRARASVVFSITGDNVAYMRAVAGELVKAFESLEACVDVVLRYPGLVRFRRTSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQVPPYEEWRTIRQVCPHILCSFRTDLLPPRCSNVFGVFRRIRPHSFVAPVKRSMEVERLQRYGEGPVQTNAASEELVMSEALSGSITSPLSGADTKSSGAPPGGLASEEQGSLAPTRAIGGTAVSSPLPEFSHTLATFVPDG-GRNDDAA--ARDMPLQPGLVATAMPIPEPVYSAKGEAGGVRRADWSGAAATGGQP 784
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHU1_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.370e-38
Identity = 97/192 (50.52%), Postives = 111/192 (57.81%), Query Frame = 1 
Query:  388 MVRFRPHFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFCRSFEAEIHNARHGQEPVQTDARGCEDVTSGPALGLMTSPCSGAEHESSGSPPAGLASEERWPPPPATATGATMSLLLAENLP-APPSLLQDGVGHNDEAGDFARDMRWQPAAETAMLITESAISAKAEEGG 960
            M   RPHF+HCTL VSH S RRD+YDA+  A+                               FEAEI+NA HG+ P+QT+  G EDVT GPA G M SPC G E ++SGS PA LAS E+  P P T T AT        LP APPSL +DGVG +D A D ARD+RWQP AETAML  ESA  A AE GG
Sbjct:    1 MAARRPHFIHCTLAVSHLSKRRDVYDAVSVAF-------------------------------FEAEIYNAHHGEGPLQTNLSGDEDVTFGPASGSMNSPCIGEERQNSGSLPAELASGEQRFPAPMTPTDATAVPSPLPKLPHAPPSLSEDGVGDDDTAADDARDIRWQPVAETAMLTPESAAEA-AEAGG 160
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.430e-19
Identity = 48/135 (35.56%), Postives = 81/135 (60.00%), Query Frame = 1 
Query:  202 IQETLPEMTRLTKTLERSNVSSGVGGFFYHSNMAYMKAVDGDLEALVRSLQACVAVVLRYPGMVRFRP--HFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFCRSFEAEIHNA 600
            ++E +PE+ R    L R+ + SG+G   Y+ N+ +++A+D ++ A V S    V+ +LRYPG+ R+    H VH  L     + RR+ Y+A++ AYN +RP     APP+EEW  ++ ICD+ +CR+   ++  A
Sbjct:  535 MKEAMPELLRANSFLSRAKMQSGLGSLLYYGNLCFLQALDNEIAASVGSFHRSVSALLRYPGLCRYNSLSHNVHTQLWGLANARRREQYEALRAAYNPMRPARLSPAPPFEEWTGMSDICDHPYCRNVAEQMSAA 669
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY46_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.390e-12
Identity = 42/131 (32.06%), Postives = 72/131 (54.96%), Query Frame = 1 
Query:  214 LPEMTRLTKTLERSNVSSGVGGFFYHSNMAYMKAVD------GDLEALVRSLQACVAVVLRYPGMVRFR--PHFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFCRSFE 582
            LPEM RL +  E S++   VG   Y+ N++ ++ V+      GD+   V ++Q  + V+LR+PG+ R++   H  H  L        R+ Y+ ++ AYN +RP G    P +E W+ ++ IC+++ CR  E
Sbjct:   98 LPEMLRLKEHFE-SSMRLDVGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCRRGE 227
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE2_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.070e-11
Identity = 41/135 (30.37%), Postives = 71/135 (52.59%), Query Frame = 1 
Query:  202 IQETLPEMTRLTKTLERSNVSSGVGGFFYHSNMAYMKAVDGDLEALVRSLQACVAVVLRYPGMVRFRP--HFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPYEEWRTVTQICDNIFCRSFEAEIHNA 600
            ++E +PE+ R    L R              N+ +++A++ D+ A   S    V+ +LRYPG+ R+    H  H  L     + RR+ Y+A++ AYN +RP     APP++EW  ++ ICD+ +CR+   ++  A
Sbjct:  473 MKEAMPELLRANGLLSR--------------NLCFLQALNNDIAASAGSFHRSVSALLRYPGLCRYNSLSHNAHTQLWGLANARRREHYEALRAAYNPMRPASLSPAPPFDEWTGMSDICDHPYCRNVAEQMSAA 593
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT43_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.700e-11
Identity = 46/86 (53.49%), Postives = 58/86 (67.44%), Query Frame = 1 
Query:    1 RGAAQQKENEEPVQGESHREWGGGGMVEGNDERVREKGTQGLASGVTELVKS--HEPEVPPSGAAMKRFIQETLPEMTRLTKTLER 252
            RGAA  +EN EP  G+S+RE GGGG++E   ++VR   + G+A    EL      EP+VPP+G AMKRF +E LPEMT L KTLER
Sbjct:   98 RGAAPHEENGEPALGDSYRELGGGGVMEEGGKQVR---SAGVACDDEELANRLHREPDVPPTGPAMKRFAREALPEMTSLAKTLER 180
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8376.16507.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
Uncharacterized2.880e-13968.04protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Zn(2)-C62.360e-8353.41fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Uncharacterized6.270e-7650.44protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Zn(2)-C65.590e-7349.85fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Uncharacterized4.250e-6946.93protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Uncharacterized2.370e-3850.52protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Zn(2)-C61.430e-1935.56fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Uncharacterized1.390e-1232.06protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.070e-1130.37protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.700e-1153.49protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8376contigE_fasciculatus_S2_contig8376:1386..6746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size2755
Hectar predicted targeting categoryother localisation
Exons6
Cds size1053
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8376.16507.1prot_E_fasciculatus_S2_contig8376.16507.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8376 3013..6671 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842496.4218752-UTR-E_fasciculatus_S2_contig8376:1385..30121696842496.4218752-UTR-E_fasciculatus_S2_contig8376:1385..3012Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8376 1386..3012 -
1696842496.515769-UTR-E_fasciculatus_S2_contig8376:6671..67461696842496.515769-UTR-E_fasciculatus_S2_contig8376:6671..6746Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8376 6672..6746 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842496.4414423-CDS-E_fasciculatus_S2_contig8376:3012..30811696842496.4414423-CDS-E_fasciculatus_S2_contig8376:3012..3081Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8376 3013..3081 -
1696842496.4533148-CDS-E_fasciculatus_S2_contig8376:3103..35901696842496.4533148-CDS-E_fasciculatus_S2_contig8376:3103..3590Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8376 3104..3590 -
1696842496.4639237-CDS-E_fasciculatus_S2_contig8376:3960..41311696842496.4639237-CDS-E_fasciculatus_S2_contig8376:3960..4131Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8376 3961..4131 -
1696842496.4832172-CDS-E_fasciculatus_S2_contig8376:4960..50681696842496.4832172-CDS-E_fasciculatus_S2_contig8376:4960..5068Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8376 4961..5068 -
1696842496.4951737-CDS-E_fasciculatus_S2_contig8376:6003..60451696842496.4951737-CDS-E_fasciculatus_S2_contig8376:6003..6045Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8376 6004..6045 -
1696842496.5050356-CDS-E_fasciculatus_S2_contig8376:6495..66711696842496.5050356-CDS-E_fasciculatus_S2_contig8376:6495..6671Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8376 6496..6671 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8376.16507.1

>prot_E_fasciculatus_S2_contig8376.16507.1 ID=prot_E_fasciculatus_S2_contig8376.16507.1|Name=mRNA_E_fasciculatus_S2_contig8376.16507.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=351bp
MVEGNDERVREKGTQGLASGVTELVKSHEPEVPPSGAAMKRFIQETLPEM
TRLTKTLERSNVSSGVGGFFYHSNMAYMKAVDGDLEALVRSLQACVAVVL
RYPGMVRFRPHFVHCTLVVSHFSNRRDMYDAMKDAYNSIRPGGCWRAPPY
EEWRTVTQICDNIFCRSFEAEIHNARHGQEPVQTDARGCEDVTSGPALGL
MTSPCSGAEHESSGSPPAGLASEERWPPPPATATGATMSLLLAENLPAPP
SLLQDGVGHNDEAGDFARDMRWQPAAETAMLITESAISAKAEEGGDVRAD
RSGAAAASGQPLCSGGDNAAAAAAAAAAAIPRWRPRYGEKAWRSREVRWP
*
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mRNA from alignment at E_fasciculatus_S2_contig8376:1386..6746-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8376.16507.1 ID=mRNA_E_fasciculatus_S2_contig8376.16507.1|Name=mRNA_E_fasciculatus_S2_contig8376.16507.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5361bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8376:1386..6746- (Ectocarpus fasciculatus EfasUO2)
AGAGGGGCGGCACAGCAGAAGGAGAACGAGGAACCTGTCCAGGGAGAGTC
CCACCGAGAGTGGGGGGGTGGTGGAATGGTGGAAGGGAACGACGAACGAG
TGCGGGAGAAGGGGACGCAGGGACTGGCTTCTGGCGTCACGGAGTTGGTC
AAGTCCCATGAGCCAGAAGTGCCCCCCTCGGGAGCCGCTATGAAACGCTT
CATCCAGGAGACTTTACCGGAGATGACGCGGTTGACGAAGACACTGGAAA
GGTGGGCGACAGCGACGGGGAATGTGGCCGACAAACGCTGCAAGAGGGCA
TTCGAGTTGCGACCGCCAGCAAGGGTCCCTGCATGTGGCGCACATGGACG
CCCCGACCCGAATTGTAGCGCAGAATAGGCAAATTGCATGGTGTGGCTAA
AGGTTGTAAATCTTGTTCACATATTCTGTACGAGCTTGAGTTTGCATTCT
ATAACCCAAATGATTCTGGGTTGTGTGGGTTCAAGTATGGCTACACTCTA
AATCCTTTTGATTTTCGTATCGCATTCTCAAACCCAAATGTGTGAGAAAC
CTTGGTTCTAGTCACCTTCCACCAGAGAGGATTGGGTTTCCGTCGCCTTC
CTCCTTGCTGCCTGCTGCACCATGCTCGGTGTTCGCACCCTGATACACGG
GCTGCACCATCCCCCCTATCGTTCCTATCTTGTCGCCGTCGGGCGCCCTA
GGTCGAACGTGTCCTCCGGGGTAGGCGGTTTTTTTTATCACAGGTGAGCG
AGCGAGGGCCGTCTGCTGATACCCGACGGATAGCGTTCAATATGCTGCTA
TAACATTCAGTTATGCTTGTACACGCCGCTTGTGAATAGCAGTCCCATGC
TGCACCCCCTGTTTTGGAGATAGGGCACGGCCTGTTTTAGAGCTCATTCG
TTGAGCTTGGATGAGCGACAACTCCGTCCACCCGTGGGCACGATCGCTAT
AACGTTTCTGGCACAAGTAGTGTACTTCTCCGTGCTGCGGTCATCGCTCA
ATGCAATGCGTGGGTTGCTGTACAACTCTACACCCGCTTTAGCAGCGAGT
GCCGAGTCTGAAATTAAAGCTACTTACTACGCTTCGGGAGCGAGCATTTT
TGCCTCGCATACTTCTCAAGGGCACTTTTTTCGTGGACCCATGCCCTTTT
TGCTCCGACTCACGTGAATTTTCACAGTGGAGCTCTCGAAACCTGAGTTT
ATATACCAGGGAGCATTTTCCGCGAAGACAAACCGTGACAAATCAACATT
TTTGCTGAAACCCATCATCAACGACACAACGACAATGACACAAACACTTT
CGAATACATGTCTCGGCCGCCTGCTCTAAAGTATTACTGTTACGTTCTTC
GTGCAGAAACACGGCCGGTGTTGGCGTCAACGTTCAGGCAAATAACAGCG
AATAGTGCCGACAACATCTCGTTGCCGATTGTCCAAAGTTCGATCCTTTC
GGGGTTTCAGCCATACAACCTCCTCACCCTACAGCTTATTTCCAGCCATT
TAAACTATGCAACTTTTCATGCAGTCTGGCCGCCCGCCCCATTTGGGGGC
GAGGGGCCAATCACTCCCCCTCGTACTCTAATATTCCCCGCCAATTCATC
ATTTTTCCACGTGCTCGTGTGACCCAAATGTCATGCTCGGTGAATTCCTG
CCGCCCCTCCATACTCTCGCTCCCGCAGCAACATGGCCTACATGAAGGCT
GTCGACGGAGACCTTGAAGCCTTGGTCAGGTCTCTCCAGGCCTGCGTGGC
TGTAGTCCTGCGCTACCCCGGCATGGTCCGGTTCAGGTACGGTGGGTGGA
TGCTCCGTTTGCCTCCTTGCGTTTGACCCTGTCCAGAGCTTACATCTAGG
GTCTGAAGCTCGCCGTTGTTTGCTGTTTTCGTTTTATGTGTATGAGGTTG
AGCGTTTTCGCCGGGGTCCTGAAACTCCGCTCCGGGCCTACGTTTTCGTT
CATTCGTCCTTTCAGGAGTTGTTGTACTCGTAGGGTCTATGGTGATCGGC
TAGAGAATATCCCGGCCTCTTTCCGTGCATGTTGTACGCCGGCTTCGAAA
ACACAATATTGGGATATCTTGGCTCTGGTGTGCGTTGTATCGAAGGCGTT
GATCCTCGTTGCCTACGCTATCACTGCAACTGTGCGGGTGATTGCACCCC
TCTCTAGACAGGCTATCTCGCCGAGAGGCTTCCTTGGCCCTGTTGGCCGT
TTTTGCACCCTCTCCGTTGTGGAGAAATCGACCTGTGCACGCTGCGCGCG
ACCACTTCACAATTACTGTAGAAGCGAGTCGGCACGCAGATTTCGATGCT
GACATACTTTGAGTGCCGTCGAAGCGAAGATGCCATGGAAGGAGACCCGT
GCGGATGGCTTGTTGGACTGCGCTGCGACCCGAAAGCAAATCGATGATCA
TTGTCGTCGTCGTCAACAACGTCGTATGACAAATCTGGGTAGGACCAAGC
TTGAGTGTATCGAGTCTCGAAAGCGCTGAACTACTTCATGCGAGCTACTG
TACAGATCCGTCCCGGCGGACCCTTCATCGCTTTGTTGTAACTCATGCTT
CCGTGTTCTCTCGTGAGTGTGTTTCTTGGCATATTTCGTCTGCCGCATTT
CGTGACTGGTTTCAGGCCCCACTTCGTACACTGCACCCTCGTCGTGAGCC
ACTTTTCCAATCGGCGAGATATGTACGACGCCATGAAGGATGCGTACAAC
TCTATCCGCCCCGGTGGATGTTGGCGAGCTCCGCCGTATGAAGAGTGGAG
GACGGTTACCCAGATCTGCGACAACATATTCTGCAGGTCAGAATGACCGT
CTGCGCGATGGCGACACGTACATGTAGTTATTACTTGCTCATCGCGCGCG
AGGAGCTTCACGCATGGACCAAATTGCTGTGACAGCCTGTGTCGAAAGAT
CGGAGATCACAACGCACGTCGTGCTTGCTTCTGATTTCGTGCGATTCTAT
CGGGTGGCTGGTACGACGCAACTATGCTTGGTGCCCGTACCCTGTCTATG
ATGCGCATTGCGACCTGTTGTTGCTCTTCAGCACGCATGCATTGACGTGT
TCTCCCATCAAGTGCTTCTCATACTTGTTTCCTGTCCTTTTCTGTGCCCC
CCTGTCGCGTCGGTCCATCTTGCTCGCCCGGATCCTTTTCCCATCCTGGA
CGGAAGGTCCTTCGAGGCGGAGATTCACAACGCACGCCACGGCCAGGAAC
CTGTGCAGACTGACGCCAGAGGATGCGAAGATGTCACGTCTGGACCTGCG
CTCGGCTTGATGACGTCTCCCTGCAGTGGGGCAGAACATGAGAGCAGTGG
CTCGCCGCCAGCAGGGCTTGCCAGCGAGGAGCGTTGGCCACCGCCGCCGG
CAACGGCCACGGGTGCTACTATGTCATTGCTGCTCGCCGAAAACCTTCCC
GCCCCGCCAAGCTTGTTACAAGACGGTGTCGGGCATAACGATGAGGCTGG
CGATTTTGCTAGAGACATGCGGTGGCAACCTGCGGCTGAGACGGCCATGC
TCATCACTGAATCAGCAATATCTGCTAAGGCTGAAGAAGGCGGCGATGTT
CGTGCCGACAGGTCAGGTGCGGCAGCTGCCTCTGGGCAACCGCTCTGTTC
GGGGGGAGACAATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCGGCAGGCAATCCCACGGTGGCGCCCGAGGTATGGAGAAAA
GGCATGGCGCTCGAGGGAAGTGAGATGGCCTTGACTGATGAGGACCTGCT
GGATGCCGCGGCAGTGTTTGCGAGCGACGAGGGACTCCTGGAAATGGGAC
TGGTGTGATCTAGTAGCAGTATTTTGGTTGCAGGGATGTTCAATACCTGG
CGGAACTTGATATTCGAATTCGATTGTACAGGAGTTCGTACCGTAGTTCG
CGACGTCCGGCGTGTTGATGGCTTGTGTTTCATATCCTTTTTTTTCTACA
TGATTCACAATACAATCGGGAGTGTGAGAGAATATTATTGACACGGTGGC
AATCGCGGAAATGGTATGTATGAAATGGGGCATTGGCGGGGAACATAATA
GGGTAACGACCAGTCACGACGTTTCGGTTGGGGGCGCAGCCCTGCATGCC
GACTGGACACCATTGAGGGACCTGCAGCCGTCTCACGTCACGCACATGTC
GTGCTTACCTGTCGAAGAGTCGTTTCCACCCTTGCCCCCGATTCTCCGGC
GGGACACATCCATTGAGTGTTGTGTACGCGGCGGAAAAGGCAATGACGCG
CAGCAGGAGCTGGTGGTCCGTCGGGCGGAGTTGTTGAAGATCGTGAATTT
TGCACGGGGCCCACGCCAGGCACTCGTGTCTCGTGTACACAGCAGAACCT
CCATGAAATGGCTCCGTCTTCCACGCGAATACCCTCCAAACACATGTTGG
TGATGTTGATGAGAAAGCGACGATGTCCCTACAGTCTAGCTCTGACTAAT
TCTAATGGCGTGCTTCGCATCCGGAAATGATGGGCGCGTTGAGAGCCAGC
TGGGACGACAGCACTACTGACGACGCCCTCTTCGACGGGCGCTTCAGCTC
GACCTCTACAGGGACGGCCTACGTGCCTTCCTTGTTCAAAGAGGGGCAGC
CAGGAGTATAAAGCGCACTGAACGACTGCATATCGGACACCGGCCCGACA
GGTGACCACACCCAGGGATAGCGGTTCGTCTCCTTTTTTGTCAGACAACG
CAGGAGATCTACAGTTTCCCGACAGCCCTCATGAAGTGTGCGGGGCACGA
CCTATCTCGACGAAATCCATTATATAGTGCGGTCAATTTTAGCTCTCCAA
CGCCAGGCAATGCAGCAGTACTCCAGACGCCCACCCCCGCCCAGAAGATG
ATGTTCCAAAGCGTGAAAGGAGGCACGTGGTCCATTTCAGTGCCTTGATT
TCTCGGCCACAATGGATGCCGTCGGCTCTACTCGAGGCCACCTACCGTAA
TTAATTGTGCGTGTTATCGCACCGGGGTGCGATCGTTTTTCTATAGCGTT
TTTCTCCACAACCAGGGTGGCATCACTGCTGTCAAAAAGGGTGGTATTGG
AAACATCTGGTCGAGGGCTTTCCGGAGAGGTATCAGTTGGTGTTCGCACC
CTCCTAGTGGTGGAGAAATACGCTGTAGAAAAAACGGTAACACGGGGGTG
CGATAACACGCACAATTCGGTACTAATACTGTTGGTATCGTCTCTGCTTG
CTTAGGTGTGTGTCCGGATTATGTGTTTTGTCGAGAGTAGAACAGGCTGA
AGAACGTGCAATTTTCTGCAATGCGTGACCTCGAACCAGGCCGACAGCTC
GTAATCCATGCACACCCGGCCCCGCAACCCGTTCAGATTTGCGTTGGCCG
CCCAGGAATCC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8376:1386..6746-

>mRNA_E_fasciculatus_S2_contig8376.16507.1 ID=mRNA_E_fasciculatus_S2_contig8376.16507.1|Name=mRNA_E_fasciculatus_S2_contig8376.16507.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1053bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8376:1386..6746- (Ectocarpus fasciculatus EfasUO2)
ATGGTGGAAGGGAACGACGAACGAGTGCGGGAGAAGGGGACGCAGGGACT
GGCTTCTGGCGTCACGGAGTTGGTCAAGTCCCATGAGCCAGAAGTGCCCC
CCTCGGGAGCCGCTATGAAACGCTTCATCCAGGAGACTTTACCGGAGATG
ACGCGGTTGACGAAGACACTGGAAAGGTCGAACGTGTCCTCCGGGGTAGG
CGGTTTTTTTTATCACAGCAACATGGCCTACATGAAGGCTGTCGACGGAG
ACCTTGAAGCCTTGGTCAGGTCTCTCCAGGCCTGCGTGGCTGTAGTCCTG
CGCTACCCCGGCATGGTCCGGTTCAGGCCCCACTTCGTACACTGCACCCT
CGTCGTGAGCCACTTTTCCAATCGGCGAGATATGTACGACGCCATGAAGG
ATGCGTACAACTCTATCCGCCCCGGTGGATGTTGGCGAGCTCCGCCGTAT
GAAGAGTGGAGGACGGTTACCCAGATCTGCGACAACATATTCTGCAGGTC
CTTCGAGGCGGAGATTCACAACGCACGCCACGGCCAGGAACCTGTGCAGA
CTGACGCCAGAGGATGCGAAGATGTCACGTCTGGACCTGCGCTCGGCTTG
ATGACGTCTCCCTGCAGTGGGGCAGAACATGAGAGCAGTGGCTCGCCGCC
AGCAGGGCTTGCCAGCGAGGAGCGTTGGCCACCGCCGCCGGCAACGGCCA
CGGGTGCTACTATGTCATTGCTGCTCGCCGAAAACCTTCCCGCCCCGCCA
AGCTTGTTACAAGACGGTGTCGGGCATAACGATGAGGCTGGCGATTTTGC
TAGAGACATGCGGTGGCAACCTGCGGCTGAGACGGCCATGCTCATCACTG
AATCAGCAATATCTGCTAAGGCTGAAGAAGGCGGCGATGTTCGTGCCGAC
AGGTCAGGTGCGGCAGCTGCCTCTGGGCAACCGCTCTGTTCGGGGGGAGA
CAATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCAATCCCACGGTGGC
GCCCGAGGTATGGAGAAAAGGCATGGCGCTCGAGGGAAGTGAGATGGCCT
TGA
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